RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 PCMTD1Q96MG8 357 aaPredicted RBP17.46■□□□□ 0.39
CACNB1-206ENST00000539338 TPM2P07951 284 aa17.45■□□□□ 0.38
CACNB1-206ENST00000539338 KIF6Q6ZMV9 814 aa17.45■□□□□ 0.38
CACNB1-206ENST00000539338 WWC1Q8IX03 1113 aa17.45■□□□□ 0.38
CACNB1-206ENST00000539338 KDM4AO75164 1064 aa17.45■□□□□ 0.38
CACNB1-206ENST00000539338 PSMA5P28066 241 aa17.45■□□□□ 0.38
CACNB1-206ENST00000539338 DNAJC2Q99543 621 aaKnown RBP17.45■□□□□ 0.38
CACNB1-206ENST00000539338 ERICH2A1L162 156 aa17.44■□□□□ 0.38
CACNB1-206ENST00000539338 BAG6P46379 1132 aa17.44■□□□□ 0.38
CACNB1-206ENST00000539338 DHX16O60231 1041 aaKnown RBP17.44■□□□□ 0.38
CACNB1-206ENST00000539338 CHD1LQ86WJ1 897 aa17.44■□□□□ 0.38
CACNB1-206ENST00000539338 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
CACNB1-206ENST00000539338 CEP89Q96ST8 783 aa17.44■□□□□ 0.38
CACNB1-206ENST00000539338 HDGFL1Q5TGJ6 251 aa17.43■□□□□ 0.38
CACNB1-206ENST00000539338 CCDC39Q9UFE4 941 aa17.43■□□□□ 0.38
CACNB1-206ENST00000539338 HOOK1Q9UJC3 728 aaKnown RBP17.43■□□□□ 0.38
CACNB1-206ENST00000539338 FIBPO43427 364 aa17.43■□□□□ 0.38
CACNB1-206ENST00000539338 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
CACNB1-206ENST00000539338 RRS1Q15050 365 aaKnown RBP17.43■□□□□ 0.38
CACNB1-206ENST00000539338 ZNF771Q7L3S4 317 aaPredicted RBP17.43■□□□□ 0.38
CACNB1-206ENST00000539338 ANKRD30BQ9BXX2 1392 aa17.42■□□□□ 0.38
CACNB1-206ENST00000539338 MBD3O95983 291 aa17.42■□□□□ 0.38
CACNB1-206ENST00000539338 SDF4Q9BRK5 362 aa17.42■□□□□ 0.38
CACNB1-206ENST00000539338 MAP4K4O95819 1239 aaPredicted RBP17.42■□□□□ 0.38
CACNB1-206ENST00000539338 ANKRD20A12PQ8NF67 263 aa17.42■□□□□ 0.38
CACNB1-206ENST00000539338 EXOC5O00471 708 aa17.41■□□□□ 0.38
CACNB1-206ENST00000539338 SAFBQ15424 915 aaKnown RBP eCLIP17.41■□□□□ 0.38
CACNB1-206ENST00000539338 NPHP3Q7Z494 1330 aa17.41■□□□□ 0.38
CACNB1-206ENST00000539338 NSD3Q9BZ95 1437 aa17.41■□□□□ 0.38
CACNB1-206ENST00000539338 MCM2P49736 904 aa17.41■□□□□ 0.38
CACNB1-206ENST00000539338 K7ELQ4 463 aaPredicted RBP17.41■□□□□ 0.38
CACNB1-206ENST00000539338 FYB1O15117 783 aa17.4■□□□□ 0.38
CACNB1-206ENST00000539338 IPO7O95373 1038 aaKnown RBP17.4■□□□□ 0.38
CACNB1-206ENST00000539338 LRRCC1Q9C099 1032 aa17.4■□□□□ 0.38
CACNB1-206ENST00000539338 AMOTL2Q9Y2J4 779 aa17.4■□□□□ 0.38
CACNB1-206ENST00000539338 TSPY26PQ9H489 355 aa17.4■□□□□ 0.38
CACNB1-206ENST00000539338 CABP4P57796 275 aa17.4■□□□□ 0.38
CACNB1-206ENST00000539338 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
CACNB1-206ENST00000539338 TMEM57Q8N5G2 664 aa17.4■□□□□ 0.38
CACNB1-206ENST00000539338 ZNF772Q68DY9 489 aaPredicted RBP17.39■□□□□ 0.37
CACNB1-206ENST00000539338 TMPOP42166 694 aaKnown RBP17.39■□□□□ 0.37
CACNB1-206ENST00000539338 GPS2Q13227 327 aa17.38■□□□□ 0.37
CACNB1-206ENST00000539338 CCDC47Q96A33 483 aaKnown RBP17.38■□□□□ 0.37
CACNB1-206ENST00000539338 PHF8Q9UPP1 1060 aa17.38■□□□□ 0.37
CACNB1-206ENST00000539338 RTEL1-TNFRSF6BF6WH68 1400 aa17.38■□□□□ 0.37
CACNB1-206ENST00000539338 TRIM5Q9C035 493 aa17.38■□□□□ 0.37
CACNB1-206ENST00000539338 ARHGEF11O15085 1522 aa17.38■□□□□ 0.37
CACNB1-206ENST00000539338 THUMPD2Q9BTF0 503 aaKnown RBP17.38■□□□□ 0.37
CACNB1-206ENST00000539338 SIL1Q9H173 461 aa17.38■□□□□ 0.37
CACNB1-206ENST00000539338 CEBPZQ03701 1054 aaKnown RBP17.37■□□□□ 0.37
CACNB1-206ENST00000539338 WDR7Q9Y4E6 1490 aa17.37■□□□□ 0.37
CACNB1-206ENST00000539338 ZPR1O75312 459 aa17.37■□□□□ 0.37
CACNB1-206ENST00000539338 CCDC70Q6NSX1 233 aa17.37■□□□□ 0.37
CACNB1-206ENST00000539338 PTPN23Q9H3S7 1636 aa17.37■□□□□ 0.37
CACNB1-206ENST00000539338 FAM177BA6PVY3 158 aa17.37■□□□□ 0.37
CACNB1-206ENST00000539338 XPCQ01831 940 aaPredicted RBP17.36■□□□□ 0.37
CACNB1-206ENST00000539338 SRCIN1Q9C0H9 1055 aa17.36■□□□□ 0.37
CACNB1-206ENST00000539338 ABCC5O15440 1437 aa17.36■□□□□ 0.37
CACNB1-206ENST00000539338 MPNDQ8N594 471 aa17.36■□□□□ 0.37
CACNB1-206ENST00000539338 AK7Q96M32 723 aa17.36■□□□□ 0.37
CACNB1-206ENST00000539338 STK32BQ9NY57 414 aa17.36■□□□□ 0.37
CACNB1-206ENST00000539338 DISP3Q9P2K9 1392 aa17.36■□□□□ 0.37
CACNB1-206ENST00000539338 FCHSD2O94868 740 aa17.35■□□□□ 0.37
CACNB1-206ENST00000539338 STK3Q13188 491 aa17.35■□□□□ 0.37
CACNB1-206ENST00000539338 ERC1Q8IUD2 1116 aa17.35■□□□□ 0.37
CACNB1-206ENST00000539338 NAT10Q9H0A0 1025 aaKnown RBP17.35■□□□□ 0.37
CACNB1-206ENST00000539338 TCEAL9Q9UHQ7 104 aa17.35■□□□□ 0.37
CACNB1-206ENST00000539338 CCDC173Q0VFZ6 552 aa17.35■□□□□ 0.37
CACNB1-206ENST00000539338 HIP1O00291 1037 aa17.35■□□□□ 0.37
CACNB1-206ENST00000539338 ATP2B1P20020 1258 aa17.35■□□□□ 0.37
CACNB1-206ENST00000539338 PDCP20941 246 aa17.35■□□□□ 0.37
CACNB1-206ENST00000539338 ZC3H6P61129 1189 aaKnown RBP17.35■□□□□ 0.37
CACNB1-206ENST00000539338 FMNL2Q96PY5 1086 aa17.35■□□□□ 0.37
CACNB1-206ENST00000539338 ZNF652Q9Y2D9 606 aa17.35■□□□□ 0.37
CACNB1-206ENST00000539338 LETM1O95202 739 aaPredicted RBP17.34■□□□□ 0.37
CACNB1-206ENST00000539338 MNS1Q8NEH6 495 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 NCKAP5LQ9HCH0 1330 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 CAMSAP2Q08AD1 1489 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 MCM4P33991 863 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 KRT28Q7Z3Y7 464 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 PDILTQ8N807 584 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 GRPEL1Q9HAV7 217 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 IL1RAPL2Q9NP60 686 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 MTMR7Q9Y216 660 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 KINO60870 393 aaKnown RBP17.34■□□□□ 0.37
CACNB1-206ENST00000539338 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
CACNB1-206ENST00000539338 OLFM4Q6UX06 510 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 CYP46A1Q9Y6A2 500 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 NFE2L2Q16236 605 aa17.34■□□□□ 0.37
CACNB1-206ENST00000539338 ATAD2Q6PL18 1390 aa17.33■□□□□ 0.37
CACNB1-206ENST00000539338 BEGAINQ9BUH8 593 aa17.33■□□□□ 0.36
CACNB1-206ENST00000539338 SPC24Q8NBT2 197 aa17.33■□□□□ 0.36
CACNB1-206ENST00000539338 RARSP54136 660 aaKnown RBP17.33■□□□□ 0.36
CACNB1-206ENST00000539338 MIS18AQ9NYP9 233 aa17.32■□□□□ 0.36
CACNB1-206ENST00000539338 ZRANB1Q9UGI0 708 aa17.32■□□□□ 0.36
CACNB1-206ENST00000539338 SRGAP3O43295 1099 aa17.32■□□□□ 0.36
CACNB1-206ENST00000539338 C19orf44Q9H6X5 657 aa17.32■□□□□ 0.36
CACNB1-206ENST00000539338 SSH1Q8WYL5 1049 aa17.31■□□□□ 0.36
CACNB1-206ENST00000539338 CCDC141Q6ZP82 1450 aa17.31■□□□□ 0.36
CACNB1-206ENST00000539338 TBC1D2BQ9UPU7 963 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms