RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 PROSER2Q86WR7 435 aaPredicted RBP12.49□□□□□ -0.41
NPIPA3-202ENST00000531598 RRP7AQ9Y3A4 280 aaKnown RBP12.49□□□□□ -0.41
NPIPA3-202ENST00000531598 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
NPIPA3-202ENST00000531598 PSME1Q06323 249 aa12.48□□□□□ -0.41
NPIPA3-202ENST00000531598 RRS1Q15050 365 aaKnown RBP12.48□□□□□ -0.41
NPIPA3-202ENST00000531598 IFT57Q9NWB7 429 aa12.48□□□□□ -0.41
NPIPA3-202ENST00000531598 TRIM35Q9UPQ4 493 aa12.48□□□□□ -0.41
NPIPA3-202ENST00000531598 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
NPIPA3-202ENST00000531598 AMPHP49418 695 aa12.47□□□□□ -0.41
NPIPA3-202ENST00000531598 EIF4A2Q14240 407 aaKnown RBP12.47□□□□□ -0.41
NPIPA3-202ENST00000531598 B4GALNT3Q6L9W6 998 aa12.47□□□□□ -0.41
NPIPA3-202ENST00000531598 ABTB2Q8N961 1025 aa12.47□□□□□ -0.41
NPIPA3-202ENST00000531598 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
NPIPA3-202ENST00000531598 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
NPIPA3-202ENST00000531598 MST1RQ04912 1400 aa12.46□□□□□ -0.41
NPIPA3-202ENST00000531598 MAP2P11137 1827 aaKnown RBP12.46□□□□□ -0.41
NPIPA3-202ENST00000531598 FANCIQ9NVI1 1328 aa12.46□□□□□ -0.41
NPIPA3-202ENST00000531598 RARSP54136 660 aaKnown RBP12.46□□□□□ -0.41
NPIPA3-202ENST00000531598 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.41
NPIPA3-202ENST00000531598 ESCO1Q5FWF5 840 aa12.46□□□□□ -0.41
NPIPA3-202ENST00000531598 CADPS2Q86UW7 1296 aa12.46□□□□□ -0.41
NPIPA3-202ENST00000531598 EXOC6Q8TAG9 804 aa12.46□□□□□ -0.41
NPIPA3-202ENST00000531598 CHMP4BQ9H444 224 aaKnown RBP12.46□□□□□ -0.41
NPIPA3-202ENST00000531598 KDRP35968 1356 aa12.45□□□□□ -0.42
NPIPA3-202ENST00000531598 MAP3K19Q56UN5 1328 aa12.45□□□□□ -0.42
NPIPA3-202ENST00000531598 IPO8O15397 1037 aaKnown RBP12.45□□□□□ -0.42
NPIPA3-202ENST00000531598 HTATSF1O43719 755 aaKnown RBP12.45□□□□□ -0.42
NPIPA3-202ENST00000531598 ATF3P18847 181 aa12.45□□□□□ -0.42
NPIPA3-202ENST00000531598 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
NPIPA3-202ENST00000531598 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
NPIPA3-202ENST00000531598 KIF16BQ96L93 1317 aa12.44□□□□□ -0.42
NPIPA3-202ENST00000531598 BRPF1P55201 1214 aaPredicted RBP12.44□□□□□ -0.42
NPIPA3-202ENST00000531598 CRBNQ96SW2 442 aa12.44□□□□□ -0.42
NPIPA3-202ENST00000531598 IGSF1Q8N6C5 1336 aa12.43□□□□□ -0.42
NPIPA3-202ENST00000531598 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
NPIPA3-202ENST00000531598 HMOX1P09601 288 aa12.43□□□□□ -0.42
NPIPA3-202ENST00000531598 SULT6B1Q6IMI4 303 aa12.43□□□□□ -0.42
NPIPA3-202ENST00000531598 CENPQQ7L2Z9 268 aaPredicted RBP12.43□□□□□ -0.42
NPIPA3-202ENST00000531598 CFAP44Q96MT7 982 aa12.43□□□□□ -0.42
NPIPA3-202ENST00000531598 C1orf167Q5SNV9 1468 aa12.42□□□□□ -0.42
NPIPA3-202ENST00000531598 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
NPIPA3-202ENST00000531598 TSHZ2Q9NRE2 1034 aa12.42□□□□□ -0.42
NPIPA3-202ENST00000531598 MSH6P52701 1360 aa12.42□□□□□ -0.42
NPIPA3-202ENST00000531598 SOS1Q07889 1333 aaPredicted RBP12.41□□□□□ -0.42
NPIPA3-202ENST00000531598 TCERG1O14776 1098 aaKnown RBP12.41□□□□□ -0.42
NPIPA3-202ENST00000531598 PLIN1O60240 522 aa12.41□□□□□ -0.42
NPIPA3-202ENST00000531598 ZNF853P0CG23 659 aa12.41□□□□□ -0.42
NPIPA3-202ENST00000531598 HOXC9P31274 260 aa12.41□□□□□ -0.42
NPIPA3-202ENST00000531598 HSP90AB2PQ58FF8 381 aa12.41□□□□□ -0.42
NPIPA3-202ENST00000531598 IP6K1Q92551 441 aa12.41□□□□□ -0.42
NPIPA3-202ENST00000531598 CHMP4AQ9BY43 222 aa12.41□□□□□ -0.42
NPIPA3-202ENST00000531598 BABAM1Q9NWV8 329 aa12.41□□□□□ -0.42
NPIPA3-202ENST00000531598 PLEKHG2Q9H7P9 1386 aa12.41□□□□□ -0.42
NPIPA3-202ENST00000531598 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
NPIPA3-202ENST00000531598 BCAR3O75815 825 aa12.4□□□□□ -0.42
NPIPA3-202ENST00000531598 FBLN1P23142 703 aa12.4□□□□□ -0.42
NPIPA3-202ENST00000531598 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
NPIPA3-202ENST00000531598 ARHGAP45Q92619 1136 aa12.4□□□□□ -0.42
NPIPA3-202ENST00000531598 PHACTR3Q96KR7 559 aa12.4□□□□□ -0.42
NPIPA3-202ENST00000531598 TMEM94Q12767 1356 aa12.4□□□□□ -0.42
NPIPA3-202ENST00000531598 NPHP3Q7Z494 1330 aa12.39□□□□□ -0.43
NPIPA3-202ENST00000531598 SLIT3O75094 1523 aa12.39□□□□□ -0.43
NPIPA3-202ENST00000531598 EXOSC9Q06265 439 aaKnown RBP12.39□□□□□ -0.43
NPIPA3-202ENST00000531598 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
NPIPA3-202ENST00000531598 PHRF1Q9P1Y6 1649 aaKnown RBP12.39□□□□□ -0.43
NPIPA3-202ENST00000531598 USP19O94966 1318 aa12.38□□□□□ -0.43
NPIPA3-202ENST00000531598 PEAK1Q9H792 1746 aa12.38□□□□□ -0.43
NPIPA3-202ENST00000531598 KRT28Q7Z3Y7 464 aa12.38□□□□□ -0.43
NPIPA3-202ENST00000531598 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
NPIPA3-202ENST00000531598 KIAA0232Q92628 1395 aa12.38□□□□□ -0.43
NPIPA3-202ENST00000531598 RGPD8O14715 1765 aaPredicted RBP12.38□□□□□ -0.43
NPIPA3-202ENST00000531598 NFAT5O94916 1531 aa12.37□□□□□ -0.43
NPIPA3-202ENST00000531598 C1QBPQ07021 282 aaKnown RBP12.37□□□□□ -0.43
NPIPA3-202ENST00000531598 DZIP1LQ8IYY4 767 aaKnown RBP12.37□□□□□ -0.43
NPIPA3-202ENST00000531598 CLUAP1Q96AJ1 413 aa12.37□□□□□ -0.43
NPIPA3-202ENST00000531598 ABCC6O95255 1503 aa12.37□□□□□ -0.43
NPIPA3-202ENST00000531598 LMTK3Q96Q04 1460 aa12.36□□□□□ -0.43
NPIPA3-202ENST00000531598 FRAT1Q92837 279 aaPredicted RBP12.36□□□□□ -0.43
NPIPA3-202ENST00000531598 TSR2Q969E8 191 aaKnown RBP12.36□□□□□ -0.43
NPIPA3-202ENST00000531598 EYA1Q99502 592 aa12.36□□□□□ -0.43
NPIPA3-202ENST00000531598 DDX19BQ9UMR2 479 aa12.36□□□□□ -0.43
NPIPA3-202ENST00000531598 FOXO3O43524 673 aa12.35□□□□□ -0.43
NPIPA3-202ENST00000531598 GCP02774 474 aa12.35□□□□□ -0.43
NPIPA3-202ENST00000531598 C20orf194Q5TEA3 1177 aa12.35□□□□□ -0.43
NPIPA3-202ENST00000531598 ATF7IPQ6VMQ6 1270 aa12.35□□□□□ -0.43
NPIPA3-202ENST00000531598 KDM2BQ8NHM5 1336 aa12.35□□□□□ -0.43
NPIPA3-202ENST00000531598 CHL1O00533 1208 aa12.34□□□□□ -0.43
NPIPA3-202ENST00000531598 SOX12O15370 315 aa12.34□□□□□ -0.43
NPIPA3-202ENST00000531598 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
NPIPA3-202ENST00000531598 AMOTQ4VCS5 1084 aa12.34□□□□□ -0.43
NPIPA3-202ENST00000531598 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
NPIPA3-202ENST00000531598 SSH1Q8WYL5 1049 aa12.34□□□□□ -0.43
NPIPA3-202ENST00000531598 ORAI2Q96SN7 254 aa12.34□□□□□ -0.43
NPIPA3-202ENST00000531598 API5Q9BZZ5 524 aaKnown RBP12.34□□□□□ -0.43
NPIPA3-202ENST00000531598 KDM4FA0A1W2PPD8 638 aa12.33□□□□□ -0.44
NPIPA3-202ENST00000531598 GNAT3A8MTJ3 354 aa12.33□□□□□ -0.44
NPIPA3-202ENST00000531598 TWISTNBQ3B726 338 aaPredicted RBP12.33□□□□□ -0.44
NPIPA3-202ENST00000531598 AEBP1Q8IUX7 1158 aa12.33□□□□□ -0.44
NPIPA3-202ENST00000531598 RWDD1Q9H446 243 aaPredicted RBP12.33□□□□□ -0.44
NPIPA3-202ENST00000531598 MBIPQ9NS73 344 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms