RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 IQSEC2Q5JU85 1478 aa12.63□□□□□ -0.39
SPARC-205ENST00000522348 RGPD8O14715 1765 aaPredicted RBP12.62□□□□□ -0.39
SPARC-205ENST00000522348 C1orf167Q5SNV9 1468 aa12.62□□□□□ -0.39
SPARC-205ENST00000522348 TOM1O60784 492 aa12.62□□□□□ -0.39
SPARC-205ENST00000522348 HMOX1P09601 288 aa12.62□□□□□ -0.39
SPARC-205ENST00000522348 CALD1Q05682 793 aaKnown RBP12.62□□□□□ -0.39
SPARC-205ENST00000522348 NFE2L2Q16236 605 aa12.62□□□□□ -0.39
SPARC-205ENST00000522348 HSP90AB2PQ58FF8 381 aa12.62□□□□□ -0.39
SPARC-205ENST00000522348 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
SPARC-205ENST00000522348 FLT4P35916 1363 aa12.61□□□□□ -0.39
SPARC-205ENST00000522348 MSH6P52701 1360 aa12.61□□□□□ -0.39
SPARC-205ENST00000522348 SOX12O15370 315 aa12.61□□□□□ -0.39
SPARC-205ENST00000522348 NUTM2GQ5VZR2 741 aa12.61□□□□□ -0.39
SPARC-205ENST00000522348 CT47B1P0C2W7 299 aaPredicted RBP12.6□□□□□ -0.39
SPARC-205ENST00000522348 PIP4K2BP78356 416 aa12.6□□□□□ -0.39
SPARC-205ENST00000522348 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
SPARC-205ENST00000522348 ILDR1Q86SU0 546 aaPredicted RBP12.6□□□□□ -0.39
SPARC-205ENST00000522348 PHACTR3Q96KR7 559 aa12.6□□□□□ -0.39
SPARC-205ENST00000522348 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
SPARC-205ENST00000522348 SULT6B1Q6IMI4 303 aa12.59□□□□□ -0.39
SPARC-205ENST00000522348 HOXC9P31274 260 aa12.58□□□□□ -0.4
SPARC-205ENST00000522348 IP6K1Q92551 441 aa12.58□□□□□ -0.4
SPARC-205ENST00000522348 MST1RQ04912 1400 aa12.57□□□□□ -0.4
SPARC-205ENST00000522348 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
SPARC-205ENST00000522348 ARHGEF10O15013 1369 aa12.56□□□□□ -0.4
SPARC-205ENST00000522348 GCP02774 474 aa12.56□□□□□ -0.4
SPARC-205ENST00000522348 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
SPARC-205ENST00000522348 PIK3C2AO00443 1686 aa12.56□□□□□ -0.4
SPARC-205ENST00000522348 NPHP3Q7Z494 1330 aa12.56□□□□□ -0.4
SPARC-205ENST00000522348 STRCP1A6NGW2 1772 aa12.56□□□□□ -0.4
SPARC-205ENST00000522348 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
SPARC-205ENST00000522348 GNAI1P63096 354 aa12.55□□□□□ -0.4
SPARC-205ENST00000522348 XPCQ01831 940 aaPredicted RBP12.55□□□□□ -0.4
SPARC-205ENST00000522348 EYA1Q99502 592 aa12.55□□□□□ -0.4
SPARC-205ENST00000522348 KIF1AQ12756 1690 aa12.54□□□□□ -0.4
SPARC-205ENST00000522348 AEBP1Q8IUX7 1158 aa12.54□□□□□ -0.4
SPARC-205ENST00000522348 SLAIN2Q9P270 581 aa12.54□□□□□ -0.4
SPARC-205ENST00000522348 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
SPARC-205ENST00000522348 PLIN1O60240 522 aa12.53□□□□□ -0.4
SPARC-205ENST00000522348 RARSP54136 660 aaKnown RBP12.53□□□□□ -0.4
SPARC-205ENST00000522348 ARHGEF25Q86VW2 580 aa12.53□□□□□ -0.4
SPARC-205ENST00000522348 IFT57Q9NWB7 429 aa12.53□□□□□ -0.4
SPARC-205ENST00000522348 USP19O94966 1318 aa12.53□□□□□ -0.4
SPARC-205ENST00000522348 HTATSF1O43719 755 aaKnown RBP12.52□□□□□ -0.41
SPARC-205ENST00000522348 BCAR3O75815 825 aa12.52□□□□□ -0.41
SPARC-205ENST00000522348 PDE3AQ14432 1141 aa12.52□□□□□ -0.41
SPARC-205ENST00000522348 GAS2L2Q8NHY3 880 aa12.52□□□□□ -0.41
SPARC-205ENST00000522348 EXOC6Q8TAG9 804 aa12.52□□□□□ -0.41
SPARC-205ENST00000522348 ZNF428Q96B54 188 aa12.52□□□□□ -0.41
SPARC-205ENST00000522348 CCDC136Q96JN2 1154 aa12.52□□□□□ -0.41
SPARC-205ENST00000522348 FANCIQ9NVI1 1328 aa12.52□□□□□ -0.41
SPARC-205ENST00000522348 KDRP35968 1356 aa12.52□□□□□ -0.41
SPARC-205ENST00000522348 PEAK1Q9H792 1746 aa12.51□□□□□ -0.41
SPARC-205ENST00000522348 ZNF853P0CG23 659 aa12.51□□□□□ -0.41
SPARC-205ENST00000522348 EXOSC9Q06265 439 aaKnown RBP12.51□□□□□ -0.41
SPARC-205ENST00000522348 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
SPARC-205ENST00000522348 MS4A1P11836 297 aa12.5□□□□□ -0.41
SPARC-205ENST00000522348 B4GALNT3Q6L9W6 998 aa12.5□□□□□ -0.41
SPARC-205ENST00000522348 BRINP3Q76B58 766 aa12.5□□□□□ -0.41
SPARC-205ENST00000522348 TSR2Q969E8 191 aaKnown RBP12.5□□□□□ -0.41
SPARC-205ENST00000522348 LTV1Q96GA3 475 aaPredicted RBP12.5□□□□□ -0.41
SPARC-205ENST00000522348 SPATA31A3Q5VYP0 1347 aa12.49□□□□□ -0.41
SPARC-205ENST00000522348 ZBTB7CA1YPR0 619 aa12.49□□□□□ -0.41
SPARC-205ENST00000522348 MTHFSDQ2M296 383 aaKnown RBP12.49□□□□□ -0.41
SPARC-205ENST00000522348 RTF1Q92541 710 aaKnown RBP12.49□□□□□ -0.41
SPARC-205ENST00000522348 CRBNQ96SW2 442 aa12.49□□□□□ -0.41
SPARC-205ENST00000522348 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
SPARC-205ENST00000522348 SLIT3O75094 1523 aa12.48□□□□□ -0.41
SPARC-205ENST00000522348 NFAT5O94916 1531 aa12.48□□□□□ -0.41
SPARC-205ENST00000522348 CANXP27824 592 aaKnown RBP12.48□□□□□ -0.41
SPARC-205ENST00000522348 HAP1P54257 671 aaPredicted RBP12.48□□□□□ -0.41
SPARC-205ENST00000522348 AAMPQ13685 434 aa12.48□□□□□ -0.41
SPARC-205ENST00000522348 ALDH1L2Q3SY69 923 aa12.48□□□□□ -0.41
SPARC-205ENST00000522348 C20orf194Q5TEA3 1177 aa12.47□□□□□ -0.41
SPARC-205ENST00000522348 NBPF6Q5VWK0 638 aa12.47□□□□□ -0.41
SPARC-205ENST00000522348 DDX17Q92841 729 aaKnown RBP12.47□□□□□ -0.41
SPARC-205ENST00000522348 NBPF4Q96M43 638 aa12.47□□□□□ -0.41
SPARC-205ENST00000522348 RGPD1P0DJD0 1748 aa12.47□□□□□ -0.41
SPARC-205ENST00000522348 MARF1Q9Y4F3 1742 aaKnown RBP12.47□□□□□ -0.41
SPARC-205ENST00000522348 TRPM3Q9HCF6 1732 aaPredicted RBP12.46□□□□□ -0.41
SPARC-205ENST00000522348 SOS2Q07890 1332 aaPredicted RBP12.46□□□□□ -0.41
SPARC-205ENST00000522348 FAM83GA6ND36 823 aa12.46□□□□□ -0.41
SPARC-205ENST00000522348 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.41
SPARC-205ENST00000522348 CHL1O00533 1208 aa12.46□□□□□ -0.41
SPARC-205ENST00000522348 IPO8O15397 1037 aaKnown RBP12.46□□□□□ -0.41
SPARC-205ENST00000522348 FRAT1Q92837 279 aaPredicted RBP12.46□□□□□ -0.41
SPARC-205ENST00000522348 THUMPD2Q9BTF0 503 aaKnown RBP12.46□□□□□ -0.41
SPARC-205ENST00000522348 MBIPQ9NS73 344 aa12.46□□□□□ -0.41
SPARC-205ENST00000522348 TNS3Q68CZ2 1445 aa12.45□□□□□ -0.42
SPARC-205ENST00000522348 BRPF1P55201 1214 aaPredicted RBP12.45□□□□□ -0.42
SPARC-205ENST00000522348 ZC3H6P61129 1189 aaKnown RBP12.45□□□□□ -0.42
SPARC-205ENST00000522348 DCTN1Q14203 1278 aa12.45□□□□□ -0.42
SPARC-205ENST00000522348 AMOTQ4VCS5 1084 aa12.45□□□□□ -0.42
SPARC-205ENST00000522348 PLEKHO1Q53GL0 409 aaPredicted RBP12.45□□□□□ -0.42
SPARC-205ENST00000522348 ZKSCAN2Q63HK3 967 aa12.45□□□□□ -0.42
SPARC-205ENST00000522348 ANKRD24Q8TF21 1146 aa12.45□□□□□ -0.42
SPARC-205ENST00000522348 XIRP1Q702N8 1843 aaKnown RBP12.44□□□□□ -0.42
SPARC-205ENST00000522348 VAMP4O75379 141 aa12.44□□□□□ -0.42
SPARC-205ENST00000522348 PLEKHG5O94827 1062 aa12.44□□□□□ -0.42
SPARC-205ENST00000522348 MCM10Q7L590 875 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms