RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 PCDHB15Q9Y5E8 787 aa17.93■□□□□ 0.46
SMIM12-206ENST00000521580 TRIM27P14373 513 aa17.92■□□□□ 0.46
SMIM12-206ENST00000521580 AAMPQ13685 434 aa17.92■□□□□ 0.46
SMIM12-206ENST00000521580 HSP90AB2PQ58FF8 381 aa17.92■□□□□ 0.46
SMIM12-206ENST00000521580 AEBP1Q8IUX7 1158 aa17.92■□□□□ 0.46
SMIM12-206ENST00000521580 LMOD3Q0VAK6 560 aa17.91■□□□□ 0.46
SMIM12-206ENST00000521580 ATF7IPQ6VMQ6 1270 aa17.91■□□□□ 0.46
SMIM12-206ENST00000521580 ANKLE2Q86XL3 938 aa17.91■□□□□ 0.46
SMIM12-206ENST00000521580 ITPRIPQ8IWB1 547 aa17.91■□□□□ 0.46
SMIM12-206ENST00000521580 ZBTB47Q9UFB7 747 aaPredicted RBP17.91■□□□□ 0.46
SMIM12-206ENST00000521580 GNAI1P63096 354 aa17.91■□□□□ 0.46
SMIM12-206ENST00000521580 OVOS2A0A0J9YW53 1432 aa17.9■□□□□ 0.46
SMIM12-206ENST00000521580 OVOS2Q6IE36 1432 aa17.9■□□□□ 0.46
SMIM12-206ENST00000521580 ELL2O00472 640 aaPredicted RBP17.9■□□□□ 0.46
SMIM12-206ENST00000521580 MYT1Q01538 1121 aa17.9■□□□□ 0.46
SMIM12-206ENST00000521580 FAM83GA6ND36 823 aa17.9■□□□□ 0.46
SMIM12-206ENST00000521580 PAK3O75914 559 aaPredicted RBP17.89■□□□□ 0.46
SMIM12-206ENST00000521580 FAM161AQ3B820 660 aa17.89■□□□□ 0.46
SMIM12-206ENST00000521580 TTC21AQ8NDW8 1320 aa17.89■□□□□ 0.45
SMIM12-206ENST00000521580 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
SMIM12-206ENST00000521580 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
SMIM12-206ENST00000521580 RBM33Q96EV2 1170 aaKnown RBP17.89■□□□□ 0.45
SMIM12-206ENST00000521580 IFT57Q9NWB7 429 aa17.88■□□□□ 0.45
SMIM12-206ENST00000521580 KIF16BQ96L93 1317 aa17.88■□□□□ 0.45
SMIM12-206ENST00000521580 DIP2AQ14689 1571 aa17.88■□□□□ 0.45
SMIM12-206ENST00000521580 CEP170BQ9Y4F5 1589 aaPredicted RBP17.88■□□□□ 0.45
SMIM12-206ENST00000521580 TOPAZ1Q8N9V7 1692 aa17.88■□□□□ 0.45
SMIM12-206ENST00000521580 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
SMIM12-206ENST00000521580 RWDD1Q9H446 243 aaPredicted RBP17.88■□□□□ 0.45
SMIM12-206ENST00000521580 MBIPQ9NS73 344 aa17.87■□□□□ 0.45
SMIM12-206ENST00000521580 MAP3K19Q56UN5 1328 aa17.87■□□□□ 0.45
SMIM12-206ENST00000521580 NLRP6P59044 892 aa17.87■□□□□ 0.45
SMIM12-206ENST00000521580 AMPHP49418 695 aa17.86■□□□□ 0.45
SMIM12-206ENST00000521580 ALDH1L2Q3SY69 923 aa17.86■□□□□ 0.45
SMIM12-206ENST00000521580 TSPYL6Q8N831 410 aa17.86■□□□□ 0.45
SMIM12-206ENST00000521580 SSH2Q76I76 1423 aa17.86■□□□□ 0.45
SMIM12-206ENST00000521580 DDX19BQ9UMR2 479 aa17.86■□□□□ 0.45
SMIM12-206ENST00000521580 RIMS1Q86UR5 1692 aaKnown RBP17.85■□□□□ 0.45
SMIM12-206ENST00000521580 C14orf37Q86TY3 774 aa17.85■□□□□ 0.45
SMIM12-206ENST00000521580 TMEM57Q8N5G2 664 aa17.85■□□□□ 0.45
SMIM12-206ENST00000521580 USP31Q70CQ4 1352 aa17.85■□□□□ 0.45
SMIM12-206ENST00000521580 NRKQ7Z2Y5 1582 aa17.85■□□□□ 0.45
SMIM12-206ENST00000521580 CFAP44Q96MT7 982 aa17.85■□□□□ 0.45
SMIM12-206ENST00000521580 PIK3R4Q99570 1358 aa17.84■□□□□ 0.45
SMIM12-206ENST00000521580 VAMP4O75379 141 aa17.84■□□□□ 0.45
SMIM12-206ENST00000521580 C8orf34Q49A92 452 aa17.84■□□□□ 0.45
SMIM12-206ENST00000521580 ZNF428Q96B54 188 aa17.84■□□□□ 0.45
SMIM12-206ENST00000521580 ZNF853P0CG23 659 aa17.83■□□□□ 0.45
SMIM12-206ENST00000521580 TWISTNBQ3B726 338 aaPredicted RBP17.83■□□□□ 0.44
SMIM12-206ENST00000521580 ABTB2Q8N961 1025 aa17.82■□□□□ 0.44
SMIM12-206ENST00000521580 PDZRN3Q9UPQ7 1066 aa17.82■□□□□ 0.44
SMIM12-206ENST00000521580 MCM10Q7L590 875 aa17.81■□□□□ 0.44
SMIM12-206ENST00000521580 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
SMIM12-206ENST00000521580 XRN1Q8IZH2 1706 aaKnown RBP17.81■□□□□ 0.44
SMIM12-206ENST00000521580 FLT4P35916 1363 aa17.8■□□□□ 0.44
SMIM12-206ENST00000521580 ANKARQ7Z5J8 1434 aa17.8■□□□□ 0.44
SMIM12-206ENST00000521580 RGPD8O14715 1765 aaPredicted RBP17.8■□□□□ 0.44
SMIM12-206ENST00000521580 MRPL50Q8N5N7 158 aaKnown RBP17.8■□□□□ 0.44
SMIM12-206ENST00000521580 SBNO1A3KN83 1393 aa17.79■□□□□ 0.44
SMIM12-206ENST00000521580 PHF8Q9UPP1 1060 aa17.79■□□□□ 0.44
SMIM12-206ENST00000521580 PEAK1Q9H792 1746 aa17.77■□□□□ 0.44
SMIM12-206ENST00000521580 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.44
SMIM12-206ENST00000521580 EYA1Q99502 592 aa17.77■□□□□ 0.44
SMIM12-206ENST00000521580 ZBTB40Q9NUA8 1239 aa17.77■□□□□ 0.43
SMIM12-206ENST00000521580 BRPF1P55201 1214 aaPredicted RBP17.76■□□□□ 0.43
SMIM12-206ENST00000521580 ESCO1Q5FWF5 840 aa17.76■□□□□ 0.43
SMIM12-206ENST00000521580 FOXO3O43524 673 aa17.76■□□□□ 0.43
SMIM12-206ENST00000521580 RTF1Q92541 710 aaKnown RBP17.76■□□□□ 0.43
SMIM12-206ENST00000521580 DDRGK1Q96HY6 314 aa17.76■□□□□ 0.43
SMIM12-206ENST00000521580 ARHGEF10O15013 1369 aa17.75■□□□□ 0.43
SMIM12-206ENST00000521580 KRT24Q2M2I5 525 aa17.75■□□□□ 0.43
SMIM12-206ENST00000521580 NALCNQ8IZF0 1738 aa17.75■□□□□ 0.43
SMIM12-206ENST00000521580 MTHFSDQ2M296 383 aaKnown RBP17.75■□□□□ 0.43
SMIM12-206ENST00000521580 DLG5Q8TDM6 1919 aa17.74■□□□□ 0.43
SMIM12-206ENST00000521580 HDAC1Q13547 482 aaPredicted RBP17.74■□□□□ 0.43
SMIM12-206ENST00000521580 NBR1Q14596 966 aa17.74■□□□□ 0.43
SMIM12-206ENST00000521580 ARHGAP45Q92619 1136 aa17.74■□□□□ 0.43
SMIM12-206ENST00000521580 PLEKHG5O94827 1062 aa17.74■□□□□ 0.43
SMIM12-206ENST00000521580 PSME1Q06323 249 aa17.74■□□□□ 0.43
SMIM12-206ENST00000521580 HOXC9P31274 260 aa17.73■□□□□ 0.43
SMIM12-206ENST00000521580 ZBTB7CA1YPR0 619 aa17.73■□□□□ 0.43
SMIM12-206ENST00000521580 CHL1O00533 1208 aa17.73■□□□□ 0.43
SMIM12-206ENST00000521580 MIS18AQ9NYP9 233 aa17.73■□□□□ 0.43
SMIM12-206ENST00000521580 DAXXQ9UER7 740 aaPredicted RBP17.72■□□□□ 0.43
SMIM12-206ENST00000521580 PIK3C2AO00443 1686 aa17.72■□□□□ 0.43
SMIM12-206ENST00000521580 IGSF1Q8N6C5 1336 aa17.72■□□□□ 0.43
SMIM12-206ENST00000521580 API5Q9BZZ5 524 aaKnown RBP17.71■□□□□ 0.43
SMIM12-206ENST00000521580 FMN2Q9NZ56 1722 aa17.71■□□□□ 0.43
SMIM12-206ENST00000521580 C1orf115Q9H7X2 142 aa17.71■□□□□ 0.43
SMIM12-206ENST00000521580 NPHP4O75161 1426 aaPredicted RBP17.7■□□□□ 0.42
SMIM12-206ENST00000521580 HAP1P54257 671 aaPredicted RBP17.7■□□□□ 0.42
SMIM12-206ENST00000521580 GAS2L2Q8NHY3 880 aa17.7■□□□□ 0.42
SMIM12-206ENST00000521580 CHMP4BQ9H444 224 aaKnown RBP17.7■□□□□ 0.42
SMIM12-206ENST00000521580 ZBTB7BO15156 539 aaPredicted RBP17.7■□□□□ 0.42
SMIM12-206ENST00000521580 TSPYL4Q9UJ04 414 aa17.69■□□□□ 0.42
SMIM12-206ENST00000521580 SETD1BQ9UPS6 1966 aaKnown RBP17.69■□□□□ 0.42
SMIM12-206ENST00000521580 ADAMTSL3P82987 1691 aa17.69■□□□□ 0.42
SMIM12-206ENST00000521580 SLC4A3P48751 1232 aa17.68■□□□□ 0.42
SMIM12-206ENST00000521580 KDRP35968 1356 aa17.68■□□□□ 0.42
SMIM12-206ENST00000521580 SEC24BO95487 1268 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms