RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 MRS2Q9HD23 443 aa9.78□□□□□ -0.84
MRPS28-205ENST00000519386 PCDHB13Q9Y5F0 798 aa9.78□□□□□ -0.84
MRPS28-205ENST00000519386 TNS3Q68CZ2 1445 aa9.78□□□□□ -0.84
MRPS28-205ENST00000519386 MON2Q7Z3U7 1717 aa9.78□□□□□ -0.84
MRPS28-205ENST00000519386 SBNO1A3KN83 1393 aa9.77□□□□□ -0.84
MRPS28-205ENST00000519386 ANKRD36BQ8N2N9 1353 aa9.77□□□□□ -0.84
MRPS28-205ENST00000519386 TMC1Q8TDI8 760 aa9.77□□□□□ -0.85
MRPS28-205ENST00000519386 SLC12A5Q9H2X9 1139 aa9.77□□□□□ -0.85
MRPS28-205ENST00000519386 TRPC6Q9Y210 931 aa9.77□□□□□ -0.85
MRPS28-205ENST00000519386 SPATA31A3Q5VYP0 1347 aa9.77□□□□□ -0.85
MRPS28-205ENST00000519386 USP6P35125 1406 aa9.76□□□□□ -0.85
MRPS28-205ENST00000519386 ASTLQ6HA08 431 aaPredicted RBP9.76□□□□□ -0.85
MRPS28-205ENST00000519386 IFNL1Q8IU54 200 aa9.76□□□□□ -0.85
MRPS28-205ENST00000519386 PANK3Q9H999 370 aa9.76□□□□□ -0.85
MRPS28-205ENST00000519386 CD163L1Q9NR16 1453 aa9.76□□□□□ -0.85
MRPS28-205ENST00000519386 ALS2Q96Q42 1657 aa9.76□□□□□ -0.85
MRPS28-205ENST00000519386 COL22A1Q8NFW1 1626 aaPredicted RBP9.75□□□□□ -0.85
MRPS28-205ENST00000519386 CPSF1Q10570 1443 aaKnown RBP9.75□□□□□ -0.85
MRPS28-205ENST00000519386 AMER1Q5JTC6 1135 aaPredicted RBP9.75□□□□□ -0.85
MRPS28-205ENST00000519386 LMOD2Q6P5Q4 547 aa9.75□□□□□ -0.85
MRPS28-205ENST00000519386 KNSTRNQ9Y448 316 aa9.75□□□□□ -0.85
MRPS28-205ENST00000519386 ZBED9Q6R2W3 1325 aa9.75□□□□□ -0.85
MRPS28-205ENST00000519386 MED1Q15648 1581 aaPredicted RBP9.75□□□□□ -0.85
MRPS28-205ENST00000519386 NUTM2BA6NNL0 878 aaPredicted RBP9.74□□□□□ -0.85
MRPS28-205ENST00000519386 NUTM2EB1AL46 878 aaPredicted RBP9.74□□□□□ -0.85
MRPS28-205ENST00000519386 CHRM1P11229 460 aaPredicted RBP9.74□□□□□ -0.85
MRPS28-205ENST00000519386 NUTM2AQ8IVF1 878 aaPredicted RBP9.74□□□□□ -0.85
MRPS28-205ENST00000519386 CIZ1Q9ULV3 898 aaPredicted RBP9.74□□□□□ -0.85
MRPS28-205ENST00000519386 NRKQ7Z2Y5 1582 aa9.74□□□□□ -0.85
MRPS28-205ENST00000519386 SPATA31A6Q5VVP1 1343 aa9.74□□□□□ -0.85
MRPS28-205ENST00000519386 LRP6O75581 1613 aa9.74□□□□□ -0.85
MRPS28-205ENST00000519386 A0A1W2PP64 1363 aa9.74□□□□□ -0.85
MRPS28-205ENST00000519386 ARHGEF10O15013 1369 aa9.74□□□□□ -0.85
MRPS28-205ENST00000519386 BLMP54132 1417 aaPredicted RBP9.73□□□□□ -0.85
MRPS28-205ENST00000519386 ATMINO43313 823 aaPredicted RBP9.73□□□□□ -0.85
MRPS28-205ENST00000519386 HDGFL2Q7Z4V5 671 aaPredicted RBP9.73□□□□□ -0.85
MRPS28-205ENST00000519386 TERF2IPQ9NYB0 399 aa9.73□□□□□ -0.85
MRPS28-205ENST00000519386 ABCA3Q99758 1704 aa9.73□□□□□ -0.85
MRPS28-205ENST00000519386 SSH2Q76I76 1423 aa9.73□□□□□ -0.85
MRPS28-205ENST00000519386 TIE1P35590 1138 aa9.72□□□□□ -0.85
MRPS28-205ENST00000519386 NUTM2GQ5VZR2 741 aa9.72□□□□□ -0.85
MRPS28-205ENST00000519386 PELP1Q8IZL8 1130 aaKnown RBP9.72□□□□□ -0.85
MRPS28-205ENST00000519386 CABLES1Q8TDN4 633 aa9.72□□□□□ -0.85
MRPS28-205ENST00000519386 BMP2KQ9NSY1 1161 aaPredicted RBP9.72□□□□□ -0.85
MRPS28-205ENST00000519386 EDC4Q6P2E9 1401 aaKnown RBP9.72□□□□□ -0.85
MRPS28-205ENST00000519386 NSD3Q9BZ95 1437 aa9.72□□□□□ -0.85
MRPS28-205ENST00000519386 PIK3C2AO00443 1686 aa9.71□□□□□ -0.85
MRPS28-205ENST00000519386 CRYBG1Q9Y4K1 1723 aa9.71□□□□□ -0.85
MRPS28-205ENST00000519386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.71□□□□□ -0.867e-7■■□□□ 13.8
MRPS28-205ENST00000519386 ABTB2Q8N961 1025 aa9.71□□□□□ -0.86
MRPS28-205ENST00000519386 PNISRQ8TF01 805 aaKnown RBP9.71□□□□□ -0.86
MRPS28-205ENST00000519386 TTC21BQ7Z4L5 1316 aa9.71□□□□□ -0.86
MRPS28-205ENST00000519386 USP54Q70EL1 1684 aa9.71□□□□□ -0.86
MRPS28-205ENST00000519386 ADAMTS2O95450 1211 aa9.7□□□□□ -0.86
MRPS28-205ENST00000519386 CCDC184Q52MB2 194 aa9.7□□□□□ -0.86
MRPS28-205ENST00000519386 MEX3CQ5U5Q3 659 aaKnown RBP9.7□□□□□ -0.86
MRPS28-205ENST00000519386 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
MRPS28-205ENST00000519386 TTC21AQ8NDW8 1320 aa9.7□□□□□ -0.86
MRPS28-205ENST00000519386 USP19O94966 1318 aa9.69□□□□□ -0.86
MRPS28-205ENST00000519386 HAP1P54257 671 aaPredicted RBP9.69□□□□□ -0.86
MRPS28-205ENST00000519386 ATN1P54259 1190 aaPredicted RBP9.69□□□□□ -0.86
MRPS28-205ENST00000519386 HNRNPUQ00839 825 aaKnown RBP eCLIP9.69□□□□□ -0.86
MRPS28-205ENST00000519386 NME9Q86XW9 330 aa9.69□□□□□ -0.86
MRPS28-205ENST00000519386 PHRF1Q9P1Y6 1649 aaKnown RBP9.69□□□□□ -0.86
MRPS28-205ENST00000519386 MARF1Q9Y4F3 1742 aaKnown RBP9.69□□□□□ -0.86
MRPS28-205ENST00000519386 TTLL13PA6NNM8 815 aa9.68□□□□□ -0.86
MRPS28-205ENST00000519386 NLRP6P59044 892 aa9.68□□□□□ -0.86
MRPS28-205ENST00000519386 CARD14Q9BXL6 1004 aa9.68□□□□□ -0.86
MRPS28-205ENST00000519386 PCDHB8Q9UN66 801 aa9.68□□□□□ -0.86
MRPS28-205ENST00000519386 C8orf37Q96NL8 207 aa9.67□□□□□ -0.86
MRPS28-205ENST00000519386 SLIT3O75094 1523 aa9.66□□□□□ -0.86
MRPS28-205ENST00000519386 USP31Q70CQ4 1352 aa9.66□□□□□ -0.86
MRPS28-205ENST00000519386 PPP2R1AP30153 589 aa9.66□□□□□ -0.86
MRPS28-205ENST00000519386 CC2D1BQ5T0F9 858 aaKnown RBP9.66□□□□□ -0.86
MRPS28-205ENST00000519386 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
MRPS28-205ENST00000519386 FAM9BQ8IZU0 186 aa9.66□□□□□ -0.86
MRPS28-205ENST00000519386 GTF3C3Q9Y5Q9 886 aa9.66□□□□□ -0.86
MRPS28-205ENST00000519386 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.86
MRPS28-205ENST00000519386 AFF2P51816 1311 aa9.65□□□□□ -0.86
MRPS28-205ENST00000519386 ZC3H6P61129 1189 aaKnown RBP9.65□□□□□ -0.86
MRPS28-205ENST00000519386 NGLY1Q96IV0 654 aa9.65□□□□□ -0.86
MRPS28-205ENST00000519386 RGS17Q9UGC6 210 aaPredicted RBP9.65□□□□□ -0.86
MRPS28-205ENST00000519386 OVOS2A0A0J9YW53 1432 aa9.65□□□□□ -0.87
MRPS28-205ENST00000519386 OVOS2Q6IE36 1432 aa9.65□□□□□ -0.87
MRPS28-205ENST00000519386 PLCH1Q4KWH8 1693 aa9.64□□□□□ -0.87
MRPS28-205ENST00000519386 KIAA0232Q92628 1395 aa9.64□□□□□ -0.87
MRPS28-205ENST00000519386 MAP2P11137 1827 aaKnown RBP9.64□□□□□ -0.87
MRPS28-205ENST00000519386 FAM83GA6ND36 823 aa9.64□□□□□ -0.87
MRPS28-205ENST00000519386 FYB1O15117 783 aa9.64□□□□□ -0.87
MRPS28-205ENST00000519386 SOX12O15370 315 aa9.64□□□□□ -0.87
MRPS28-205ENST00000519386 GCP02774 474 aa9.64□□□□□ -0.87
MRPS28-205ENST00000519386 NGEFQ8N5V2 710 aa9.64□□□□□ -0.87
MRPS28-205ENST00000519386 GGNBP2Q9H3C7 697 aa9.64□□□□□ -0.87
MRPS28-205ENST00000519386 PRDM11Q9NQV5 511 aa9.64□□□□□ -0.87
MRPS28-205ENST00000519386 NFAT5O94916 1531 aa9.64□□□□□ -0.87
MRPS28-205ENST00000519386 COL14A1Q05707 1796 aaKnown RBP9.63□□□□□ -0.87
MRPS28-205ENST00000519386 CHRNA2Q15822 529 aa9.63□□□□□ -0.87
MRPS28-205ENST00000519386 CPDO75976 1380 aa9.63□□□□□ -0.87
MRPS28-205ENST00000519386 SLIT2O94813 1529 aa9.62□□□□□ -0.87
MRPS28-205ENST00000519386 COL3A1P02461 1466 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms