RNA–Protein interactions for RNA: ENST00000509053.5

SSBP2-212, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene SSBP2, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-212ENST00000509053 SLAIN2Q9P270 581 aa11.3□□□□□ -0.6
SSBP2-212ENST00000509053 KIF1AQ12756 1690 aa11.29□□□□□ -0.6
SSBP2-212ENST00000509053 ROBO1Q9Y6N7 1651 aa11.29□□□□□ -0.6
SSBP2-212ENST00000509053 NRKQ7Z2Y5 1582 aa11.29□□□□□ -0.6
SSBP2-212ENST00000509053 IQSEC2Q5JU85 1478 aa11.29□□□□□ -0.6
SSBP2-212ENST00000509053 CPSF1Q10570 1443 aaKnown RBP11.29□□□□□ -0.6
SSBP2-212ENST00000509053 ACEP12821 1306 aa11.29□□□□□ -0.6
SSBP2-212ENST00000509053 PLEKHG3A1L390 1219 aa11.29□□□□□ -0.6
SSBP2-212ENST00000509053 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
SSBP2-212ENST00000509053 DDX17Q92841 729 aaKnown RBP11.29□□□□□ -0.6
SSBP2-212ENST00000509053 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
SSBP2-212ENST00000509053 PANK3Q9H999 370 aa11.29□□□□□ -0.6
SSBP2-212ENST00000509053 BRINP3Q76B58 766 aa11.28□□□□□ -0.6
SSBP2-212ENST00000509053 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
SSBP2-212ENST00000509053 POLR3AO14802 1390 aaPredicted RBP11.27□□□□□ -0.6
SSBP2-212ENST00000509053 ANKRD36BQ8N2N9 1353 aa11.27□□□□□ -0.6
SSBP2-212ENST00000509053 NINLQ9Y2I6 1382 aa11.27□□□□□ -0.6
SSBP2-212ENST00000509053 NHSL1Q5SYE7 1610 aa11.26□□□□□ -0.61
SSBP2-212ENST00000509053 PER1O15534 1290 aaPredicted RBP11.26□□□□□ -0.61
SSBP2-212ENST00000509053 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
SSBP2-212ENST00000509053 VASPP50552 380 aaPredicted RBP11.26□□□□□ -0.61
SSBP2-212ENST00000509053 IFNLR1Q8IU57 520 aaPredicted RBP11.26□□□□□ -0.61
SSBP2-212ENST00000509053 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
SSBP2-212ENST00000509053 FOXO3O43524 673 aa11.25□□□□□ -0.61
SSBP2-212ENST00000509053 XPCQ01831 940 aaPredicted RBP11.25□□□□□ -0.61
SSBP2-212ENST00000509053 IER5LQ5T953 404 aa11.25□□□□□ -0.61
SSBP2-212ENST00000509053 NGDNQ8NEJ9 315 aaKnown RBP11.25□□□□□ -0.61
SSBP2-212ENST00000509053 USP6P35125 1406 aa11.25□□□□□ -0.61
SSBP2-212ENST00000509053 NSD3Q9BZ95 1437 aa11.25□□□□□ -0.61
SSBP2-212ENST00000509053 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
SSBP2-212ENST00000509053 UBAP1LF5GYI3 381 aa11.25□□□□□ -0.61
SSBP2-212ENST00000509053 KIF20BQ96Q89 1820 aa11.24□□□□□ -0.61
SSBP2-212ENST00000509053 SSH2Q76I76 1423 aa11.24□□□□□ -0.61
SSBP2-212ENST00000509053 PXDNQ92626 1479 aa11.24□□□□□ -0.61
SSBP2-212ENST00000509053 SEC24BO95487 1268 aa11.24□□□□□ -0.61
SSBP2-212ENST00000509053 PIP4K2BP78356 416 aa11.24□□□□□ -0.61
SSBP2-212ENST00000509053 SGIP1Q9BQI5 828 aa11.24□□□□□ -0.61
SSBP2-212ENST00000509053 TERF2IPQ9NYB0 399 aa11.24□□□□□ -0.61
SSBP2-212ENST00000509053 MARF1Q9Y4F3 1742 aaKnown RBP11.23□□□□□ -0.61
SSBP2-212ENST00000509053 PIK3C2AO00443 1686 aa11.23□□□□□ -0.61
SSBP2-212ENST00000509053 TOM1O60784 492 aa11.23□□□□□ -0.61
SSBP2-212ENST00000509053 HDGFL2Q7Z4V5 671 aaPredicted RBP11.23□□□□□ -0.61
SSBP2-212ENST00000509053 EDC4Q6P2E9 1401 aaKnown RBP11.22□□□□□ -0.61
SSBP2-212ENST00000509053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.22□□□□□ -0.61
SSBP2-212ENST00000509053 ALS2Q96Q42 1657 aa11.22□□□□□ -0.61
SSBP2-212ENST00000509053 BRPF1P55201 1214 aaPredicted RBP11.21□□□□□ -0.61
SSBP2-212ENST00000509053 CNGB1Q14028 1251 aaPredicted RBP11.21□□□□□ -0.61
SSBP2-212ENST00000509053 KRT28Q7Z3Y7 464 aa11.21□□□□□ -0.61
SSBP2-212ENST00000509053 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
SSBP2-212ENST00000509053 AHDC1Q5TGY3 1603 aaPredicted RBP11.21□□□□□ -0.61
SSBP2-212ENST00000509053 PHLPP1O60346 1717 aa11.21□□□□□ -0.61
SSBP2-212ENST00000509053 ANKRD26Q9UPS8 1709 aa11.21□□□□□ -0.61
SSBP2-212ENST00000509053 TTC21BQ7Z4L5 1316 aa11.21□□□□□ -0.62
SSBP2-212ENST00000509053 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
SSBP2-212ENST00000509053 HMGB1P09429 215 aaKnown RBP11.2□□□□□ -0.62
SSBP2-212ENST00000509053 CDK11BP21127 795 aaKnown RBP11.2□□□□□ -0.62
SSBP2-212ENST00000509053 PSME1Q06323 249 aa11.2□□□□□ -0.62
SSBP2-212ENST00000509053 NME9Q86XW9 330 aa11.19□□□□□ -0.62
SSBP2-212ENST00000509053 COL16A1Q07092 1604 aaPredicted RBP11.19□□□□□ -0.62
SSBP2-212ENST00000509053 SOS2Q07890 1332 aaPredicted RBP11.19□□□□□ -0.62
SSBP2-212ENST00000509053 NPHP3Q7Z494 1330 aa11.19□□□□□ -0.62
SSBP2-212ENST00000509053 FYB1O15117 783 aa11.19□□□□□ -0.62
SSBP2-212ENST00000509053 ST18O60284 1047 aa11.19□□□□□ -0.62
SSBP2-212ENST00000509053 CC2D1BQ5T0F9 858 aaKnown RBP11.19□□□□□ -0.62
SSBP2-212ENST00000509053 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
SSBP2-212ENST00000509053 MIER1Q8N108 512 aa11.19□□□□□ -0.62
SSBP2-212ENST00000509053 GGNBP2Q9H3C7 697 aa11.19□□□□□ -0.62
SSBP2-212ENST00000509053 KNSTRNQ9Y448 316 aa11.19□□□□□ -0.62
SSBP2-212ENST00000509053 USP54Q70EL1 1684 aa11.18□□□□□ -0.62
SSBP2-212ENST00000509053 CRYBG1Q9Y4K1 1723 aa11.18□□□□□ -0.62
SSBP2-212ENST00000509053 NUTM2GQ5VZR2 741 aa11.18□□□□□ -0.62
SSBP2-212ENST00000509053 IGSF3O75054 1194 aa11.17□□□□□ -0.62
SSBP2-212ENST00000509053 SBNO1A3KN83 1393 aa11.16□□□□□ -0.62
SSBP2-212ENST00000509053 OVOS2A0A0J9YW53 1432 aa11.16□□□□□ -0.62
SSBP2-212ENST00000509053 TNS3Q68CZ2 1445 aa11.16□□□□□ -0.62
SSBP2-212ENST00000509053 OVOS2Q6IE36 1432 aa11.16□□□□□ -0.62
SSBP2-212ENST00000509053 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
SSBP2-212ENST00000509053 CGNL1Q0VF96 1302 aa11.16□□□□□ -0.62
SSBP2-212ENST00000509053 SPATA31A3Q5VYP0 1347 aa11.16□□□□□ -0.62
SSBP2-212ENST00000509053 TTC21AQ8NDW8 1320 aa11.16□□□□□ -0.62
SSBP2-212ENST00000509053 BRD4O60885 1362 aaPredicted RBP11.16□□□□□ -0.62
SSBP2-212ENST00000509053 ABCA3Q99758 1704 aa11.15□□□□□ -0.62
SSBP2-212ENST00000509053 FBLN1P23142 703 aa11.15□□□□□ -0.62
SSBP2-212ENST00000509053 ABTB2Q8N961 1025 aa11.15□□□□□ -0.62
SSBP2-212ENST00000509053 NPC1L1Q9UHC9 1359 aa11.15□□□□□ -0.62
SSBP2-212ENST00000509053 PHRF1Q9P1Y6 1649 aaKnown RBP11.15□□□□□ -0.63
SSBP2-212ENST00000509053 LMOD2Q6P5Q4 547 aa11.14□□□□□ -0.63
SSBP2-212ENST00000509053 SLAIN1Q8ND83 568 aa11.14□□□□□ -0.63
SSBP2-212ENST00000509053 ANO8Q9HCE9 1232 aaPredicted RBP11.14□□□□□ -0.63
SSBP2-212ENST00000509053 PCDHB13Q9Y5F0 798 aa11.14□□□□□ -0.63
SSBP2-212ENST00000509053 USP31Q70CQ4 1352 aa11.14□□□□□ -0.63
SSBP2-212ENST00000509053 GLIPR1L2Q4G1C9 344 aa11.14□□□□□ -0.63
SSBP2-212ENST00000509053 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
SSBP2-212ENST00000509053 MAP2P11137 1827 aaKnown RBP11.13□□□□□ -0.63
SSBP2-212ENST00000509053 PARD3Q8TEW0 1356 aa11.13□□□□□ -0.63
SSBP2-212ENST00000509053 TNNT2P45379 298 aaPredicted RBP11.13□□□□□ -0.63
SSBP2-212ENST00000509053 NLRP6P59044 892 aa11.13□□□□□ -0.63
SSBP2-212ENST00000509053 NSD2O96028 1365 aa11.13□□□□□ -0.63
SSBP2-212ENST00000509053 SLIT3O75094 1523 aa11.12□□□□□ -0.63
SSBP2-212ENST00000509053 HSP90B1P14625 803 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms