RNA–Protein interactions for RNA: ENST00000497935.5

NELFCD-212, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-212ENST00000497935 C9orf84Q5VXU9 1444 aa9.44□□□□□ -0.9
NELFCD-212ENST00000497935 ZMYM4Q5VZL5 1548 aa9.44□□□□□ -0.9
NELFCD-212ENST00000497935 CDC42BPBQ9Y5S2 1711 aa9.43□□□□□ -0.9
NELFCD-212ENST00000497935 TRAPPC8Q9Y2L5 1435 aa9.43□□□□□ -0.9
NELFCD-212ENST00000497935 SPAG9O60271 1321 aaKnown RBP9.43□□□□□ -0.9
NELFCD-212ENST00000497935 HSPA2P54652 639 aa9.43□□□□□ -0.9
NELFCD-212ENST00000497935 NOP9Q86U38 636 aaKnown RBP9.43□□□□□ -0.9
NELFCD-212ENST00000497935 ZBTB3Q9H5J0 574 aa9.43□□□□□ -0.9
NELFCD-212ENST00000497935 SLAIN2Q9P270 581 aa9.43□□□□□ -0.9
NELFCD-212ENST00000497935 TRPC6Q9Y210 931 aa9.43□□□□□ -0.9
NELFCD-212ENST00000497935 MARCH6O60337 910 aa9.42□□□□□ -0.9
NELFCD-212ENST00000497935 CTDSPL2Q05D32 466 aa9.42□□□□□ -0.9
NELFCD-212ENST00000497935 TSNAXIP1Q2TAA8 658 aa9.42□□□□□ -0.9
NELFCD-212ENST00000497935 ZNF662Q6ZS27 426 aa9.42□□□□□ -0.9
NELFCD-212ENST00000497935 TTC13Q8NBP0 860 aa9.42□□□□□ -0.9
NELFCD-212ENST00000497935 CERKQ8TCT0 537 aa9.42□□□□□ -0.9
NELFCD-212ENST00000497935 CLP1Q92989 425 aaKnown RBP9.42□□□□□ -0.9
NELFCD-212ENST00000497935 PSMD1Q99460 953 aa9.42□□□□□ -0.9
NELFCD-212ENST00000497935 PREX2Q70Z35 1606 aa9.42□□□□□ -0.9
NELFCD-212ENST00000497935 PRKAR2AP13861 404 aaKnown RBP9.41□□□□□ -0.9
NELFCD-212ENST00000497935 SLAIN1Q8ND83 568 aa9.41□□□□□ -0.9
NELFCD-212ENST00000497935 RBM46Q8TBY0 533 aaKnown RBP9.41□□□□□ -0.9
NELFCD-212ENST00000497935 CDC42BPAQ5VT25 1732 aa9.4□□□□□ -0.9
NELFCD-212ENST00000497935 ZNF644Q9H582 1327 aaPredicted RBP9.4□□□□□ -0.9
NELFCD-212ENST00000497935 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.4□□□□□ -0.9
NELFCD-212ENST00000497935 TAGLNQ01995 201 aaKnown RBP9.4□□□□□ -0.9
NELFCD-212ENST00000497935 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
NELFCD-212ENST00000497935 ZNF592Q92610 1267 aa9.4□□□□□ -0.9
NELFCD-212ENST00000497935 RBM27Q9P2N5 1060 aaKnown RBP9.4□□□□□ -0.9
NELFCD-212ENST00000497935 ARHGEF12Q9NZN5 1544 aa9.4□□□□□ -0.91
NELFCD-212ENST00000497935 GPATCH8Q9UKJ3 1502 aaKnown RBP9.4□□□□□ -0.91
NELFCD-212ENST00000497935 FER1L4A9Z1Z3 1794 aa9.4□□□□□ -0.91
NELFCD-212ENST00000497935 SIGLEC1Q9BZZ2 1709 aa9.39□□□□□ -0.91
NELFCD-212ENST00000497935 EIF4G2P78344 907 aaKnown RBP eCLIP9.39□□□□□ -0.91
NELFCD-212ENST00000497935 TYW1BQ6NUM6 668 aa9.39□□□□□ -0.91
NELFCD-212ENST00000497935 PHF12Q96QT6 1004 aa9.39□□□□□ -0.91
NELFCD-212ENST00000497935 TMA7Q9Y2S6 64 aaKnown RBP9.39□□□□□ -0.91
NELFCD-212ENST00000497935 PCDHGA10Q9Y5H3 936 aa9.39□□□□□ -0.91
NELFCD-212ENST00000497935 ABCC1P33527 1531 aa9.39□□□□□ -0.91
NELFCD-212ENST00000497935 ITSN2Q9NZM3 1697 aa9.39□□□□□ -0.91
NELFCD-212ENST00000497935 SYCP2Q9BX26 1530 aa9.38□□□□□ -0.91
NELFCD-212ENST00000497935 FAM196BA6NMK8 535 aa9.38□□□□□ -0.91
NELFCD-212ENST00000497935 GGT6Q6P531 493 aa9.38□□□□□ -0.91
NELFCD-212ENST00000497935 BOLA1Q9Y3E2 137 aa9.38□□□□□ -0.91
NELFCD-212ENST00000497935 DIP2CQ9Y2E4 1556 aa9.37□□□□□ -0.91
NELFCD-212ENST00000497935 MLH3Q9UHC1 1453 aa9.37□□□□□ -0.91
NELFCD-212ENST00000497935 ATP2B4P23634 1241 aa9.37□□□□□ -0.91
NELFCD-212ENST00000497935 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
NELFCD-212ENST00000497935 PNMA1Q8ND90 353 aa9.37□□□□□ -0.91
NELFCD-212ENST00000497935 LRRN4Q8WUT4 740 aa9.37□□□□□ -0.91
NELFCD-212ENST00000497935 PTCD2Q8WV60 388 aaKnown RBP9.37□□□□□ -0.91
NELFCD-212ENST00000497935 CUEDC1Q9NWM3 386 aaPredicted RBP9.37□□□□□ -0.91
NELFCD-212ENST00000497935 KDM5CP41229 1560 aa9.37□□□□□ -0.91
NELFCD-212ENST00000497935 SAMD9LQ8IVG5 1584 aa9.37□□□□□ -0.91
NELFCD-212ENST00000497935 EHBP1L1Q8N3D4 1523 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 PLEKHH2Q8IVE3 1493 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 ABCA6Q8N139 1617 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L15C9J2P7 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L10C9JJH3 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L13C9JLJ4 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L12C9JPN9 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L11C9JVI0 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L21D6R901 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L18D6R9N7 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L22D6RA61 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L17D6RBQ6 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L19D6RCP7 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L20D6RJB6 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 TIE1P35590 1138 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 CACNB1Q02641 598 aaPredicted RBP9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L24Q0WX57 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 PDCD7Q8N8D1 485 aaKnown RBP9.36□□□□□ -0.91
NELFCD-212ENST00000497935 HELBQ8NG08 1087 aaPredicted RBP9.36□□□□□ -0.91
NELFCD-212ENST00000497935 PIK3R5Q8WYR1 880 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 ZRANB1Q9UGI0 708 aa9.36□□□□□ -0.91
NELFCD-212ENST00000497935 TTLL13PA6NNM8 815 aa9.35□□□□□ -0.91
NELFCD-212ENST00000497935 SCAMP3O14828 347 aaKnown RBP9.35□□□□□ -0.91
NELFCD-212ENST00000497935 LZTS3O60299 673 aaPredicted RBP9.35□□□□□ -0.91
NELFCD-212ENST00000497935 HDLBPQ00341 1268 aaKnown RBP9.35□□□□□ -0.91
NELFCD-212ENST00000497935 COL19A1Q14993 1142 aa9.35□□□□□ -0.91
NELFCD-212ENST00000497935 PLEKHM2Q8IWE5 1019 aa9.35□□□□□ -0.91
NELFCD-212ENST00000497935 MICAL1Q8TDZ2 1067 aa9.35□□□□□ -0.91
NELFCD-212ENST00000497935 BACH2Q9BYV9 841 aa9.35□□□□□ -0.91
NELFCD-212ENST00000497935 TANGO6Q9C0B7 1094 aa9.35□□□□□ -0.91
NELFCD-212ENST00000497935 LNPKQ9C0E8 428 aa9.35□□□□□ -0.91
NELFCD-212ENST00000497935 LMTK3Q96Q04 1460 aa9.34□□□□□ -0.91
NELFCD-212ENST00000497935 VPS8Q8N3P4 1428 aa9.34□□□□□ -0.91
NELFCD-212ENST00000497935 FAM200AQ8TCP9 573 aa9.34□□□□□ -0.91
NELFCD-212ENST00000497935 EPS8L1Q8TE68 723 aa9.34□□□□□ -0.91
NELFCD-212ENST00000497935 ASB16Q96NS5 453 aa9.34□□□□□ -0.91
NELFCD-212ENST00000497935 DNAJC2Q99543 621 aaKnown RBP9.34□□□□□ -0.91
NELFCD-212ENST00000497935 EGFL7Q9UHF1 273 aa9.34□□□□□ -0.91
NELFCD-212ENST00000497935 KIDINS220Q9ULH0 1771 aa9.34□□□□□ -0.91
NELFCD-212ENST00000497935 SUPT6HQ7KZ85 1726 aaKnown RBP9.34□□□□□ -0.92
NELFCD-212ENST00000497935 TIAM1Q13009 1591 aa9.33□□□□□ -0.92
NELFCD-212ENST00000497935 KIAA1107Q9UPP5 1409 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms