RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 SULT6B1Q6IMI4 303 aa15.84■□□□□ 0.13
PHF3-205ENST00000494284 C3P01024 1663 aa15.83■□□□□ 0.13
PHF3-205ENST00000494284 EDC4Q6P2E9 1401 aaKnown RBP15.83■□□□□ 0.12
PHF3-205ENST00000494284 MCM10Q7L590 875 aa15.83■□□□□ 0.12
PHF3-205ENST00000494284 FAM135BQ49AJ0 1406 aa15.82■□□□□ 0.12
PHF3-205ENST00000494284 FOXO3O43524 673 aa15.82■□□□□ 0.12
PHF3-205ENST00000494284 IL27Q8NEV9 243 aa15.82■□□□□ 0.12
PHF3-205ENST00000494284 MBIPQ9NS73 344 aa15.82■□□□□ 0.12
PHF3-205ENST00000494284 FER1L4A9Z1Z3 1794 aa15.82■□□□□ 0.12
PHF3-205ENST00000494284 FRAT2O75474 233 aaPredicted RBP15.82■□□□□ 0.12
PHF3-205ENST00000494284 EIF4A2Q14240 407 aaKnown RBP15.82■□□□□ 0.12
PHF3-205ENST00000494284 C8orf58Q8NAV2 365 aa15.82■□□□□ 0.12
PHF3-205ENST00000494284 TTC21BQ7Z4L5 1316 aa15.82■□□□□ 0.12
PHF3-205ENST00000494284 NFE2L2Q16236 605 aa15.81■□□□□ 0.12
PHF3-205ENST00000494284 ATF7IPQ6VMQ6 1270 aa15.81■□□□□ 0.12
PHF3-205ENST00000494284 KNDC1Q76NI1 1749 aa15.8■□□□□ 0.12
PHF3-205ENST00000494284 CDC42BPGQ6DT37 1551 aa15.79■□□□□ 0.12
PHF3-205ENST00000494284 KCNA6P17658 529 aa15.79■□□□□ 0.12
PHF3-205ENST00000494284 RGPD8O14715 1765 aaPredicted RBP15.79■□□□□ 0.12
PHF3-205ENST00000494284 USP19O94966 1318 aa15.78■□□□□ 0.12
PHF3-205ENST00000494284 EID1Q9Y6B2 187 aa15.78■□□□□ 0.12
PHF3-205ENST00000494284 TECPR2O15040 1411 aa15.78■□□□□ 0.12
PHF3-205ENST00000494284 VAMP4O75379 141 aa15.77■□□□□ 0.12
PHF3-205ENST00000494284 NGDNQ8NEJ9 315 aaKnown RBP15.77■□□□□ 0.12
PHF3-205ENST00000494284 ARXQ96QS3 562 aa15.77■□□□□ 0.12
PHF3-205ENST00000494284 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.12
PHF3-205ENST00000494284 PLEKHG1Q9ULL1 1385 aa15.77■□□□□ 0.11
PHF3-205ENST00000494284 C14orf37Q86TY3 774 aa15.77■□□□□ 0.11
PHF3-205ENST00000494284 DLG5Q8TDM6 1919 aa15.76■□□□□ 0.11
PHF3-205ENST00000494284 SIRT1Q96EB6 747 aa15.76■□□□□ 0.11
PHF3-205ENST00000494284 ZBTB7CA1YPR0 619 aa15.75■□□□□ 0.11
PHF3-205ENST00000494284 RIMS1Q86UR5 1692 aaKnown RBP15.75■□□□□ 0.11
PHF3-205ENST00000494284 MON2Q7Z3U7 1717 aa15.74■□□□□ 0.11
PHF3-205ENST00000494284 TWISTNBQ3B726 338 aaPredicted RBP15.74■□□□□ 0.11
PHF3-205ENST00000494284 RWDD1Q9H446 243 aaPredicted RBP15.74■□□□□ 0.11
PHF3-205ENST00000494284 MAP3K19Q56UN5 1328 aa15.74■□□□□ 0.11
PHF3-205ENST00000494284 ITSN1Q15811 1721 aa15.74■□□□□ 0.11
PHF3-205ENST00000494284 MFAP1P55081 439 aaKnown RBP15.73■□□□□ 0.11
PHF3-205ENST00000494284 LNPKQ9C0E8 428 aa15.73■□□□□ 0.11
PHF3-205ENST00000494284 XPCQ01831 940 aaPredicted RBP15.73■□□□□ 0.11
PHF3-205ENST00000494284 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
PHF3-205ENST00000494284 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
PHF3-205ENST00000494284 CDK12Q9NYV4 1490 aaPredicted RBP15.72■□□□□ 0.11
PHF3-205ENST00000494284 PEAK1Q9H792 1746 aa15.72■□□□□ 0.11
PHF3-205ENST00000494284 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
PHF3-205ENST00000494284 ZBTB40Q9NUA8 1239 aa15.72■□□□□ 0.11
PHF3-205ENST00000494284 USP6P35125 1406 aa15.72■□□□□ 0.11
PHF3-205ENST00000494284 AKAP12Q02952 1782 aa15.72■□□□□ 0.11
PHF3-205ENST00000494284 NECTIN2Q92692 538 aa15.72■□□□□ 0.11
PHF3-205ENST00000494284 BRPF3Q9ULD4 1205 aa15.72■□□□□ 0.11
PHF3-205ENST00000494284 SLIT1O75093 1534 aa15.71■□□□□ 0.11
PHF3-205ENST00000494284 IL16Q14005 1332 aa15.71■□□□□ 0.11
PHF3-205ENST00000494284 PNNQ9H307 717 aaKnown RBP15.71■□□□□ 0.11
PHF3-205ENST00000494284 SETD1BQ9UPS6 1966 aaKnown RBP15.71■□□□□ 0.1
PHF3-205ENST00000494284 ARHGAP23Q9P227 1491 aa15.71■□□□□ 0.1
PHF3-205ENST00000494284 NLRP6P59044 892 aa15.7■□□□□ 0.1
PHF3-205ENST00000494284 DDX19BQ9UMR2 479 aa15.7■□□□□ 0.1
PHF3-205ENST00000494284 THEMISQ8N1K5 641 aaPredicted RBP15.7■□□□□ 0.1
PHF3-205ENST00000494284 AATKQ6ZMQ8 1374 aa15.7■□□□□ 0.1
PHF3-205ENST00000494284 PLEKHG3A1L390 1219 aa15.69■□□□□ 0.1
PHF3-205ENST00000494284 ZNF853P0CG23 659 aa15.69■□□□□ 0.1
PHF3-205ENST00000494284 GNAI1P63096 354 aa15.69■□□□□ 0.1
PHF3-205ENST00000494284 GSE1Q14687 1217 aa15.69■□□□□ 0.1
PHF3-205ENST00000494284 MTHFSDQ2M296 383 aaKnown RBP15.69■□□□□ 0.1
PHF3-205ENST00000494284 CFAP44Q96MT7 982 aa15.69■□□□□ 0.1
PHF3-205ENST00000494284 USP35Q9P2H5 1018 aa15.69■□□□□ 0.1
PHF3-205ENST00000494284 OVOS2A0A0J9YW53 1432 aa15.69■□□□□ 0.1
PHF3-205ENST00000494284 OVOS2Q6IE36 1432 aa15.69■□□□□ 0.1
PHF3-205ENST00000494284 APBB1O00213 710 aa15.68■□□□□ 0.1
PHF3-205ENST00000494284 AMPHP49418 695 aa15.68■□□□□ 0.1
PHF3-205ENST00000494284 IFT57Q9NWB7 429 aa15.68■□□□□ 0.1
PHF3-205ENST00000494284 SIRT2Q8IXJ6 389 aa15.68■□□□□ 0.1
PHF3-205ENST00000494284 UPF2Q9HAU5 1272 aaKnown RBP15.68■□□□□ 0.1
PHF3-205ENST00000494284 KIF16BQ96L93 1317 aa15.67■□□□□ 0.1
PHF3-205ENST00000494284 ZBTB7BO15156 539 aaPredicted RBP15.67■□□□□ 0.1
PHF3-205ENST00000494284 EYA1Q99502 592 aa15.67■□□□□ 0.1
PHF3-205ENST00000494284 CT47B1P0C2W7 299 aaPredicted RBP15.66■□□□□ 0.1
PHF3-205ENST00000494284 TBX22Q9Y458 520 aa15.66■□□□□ 0.1
PHF3-205ENST00000494284 ABTB2Q8N961 1025 aa15.65■□□□□ 0.1
PHF3-205ENST00000494284 NRKQ7Z2Y5 1582 aa15.65■□□□□ 0.1
PHF3-205ENST00000494284 F6X3S4 739 aa15.65■□□□□ 0.1
PHF3-205ENST00000494284 IPO8O15397 1037 aaKnown RBP15.65■□□□□ 0.1
PHF3-205ENST00000494284 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
PHF3-205ENST00000494284 ANKRD45Q5TZF3 282 aa15.65■□□□□ 0.1
PHF3-205ENST00000494284 G2E3Q7L622 706 aa15.65■□□□□ 0.1
PHF3-205ENST00000494284 DIP2AQ14689 1571 aa15.64■□□□□ 0.09
PHF3-205ENST00000494284 CEP170BQ9Y4F5 1589 aaPredicted RBP15.64■□□□□ 0.09
PHF3-205ENST00000494284 ALDH1L2Q3SY69 923 aa15.64■□□□□ 0.09
PHF3-205ENST00000494284 TBC1D2Q9BYX2 928 aa15.64■□□□□ 0.09
PHF3-205ENST00000494284 TOPAZ1Q8N9V7 1692 aa15.63■□□□□ 0.09
PHF3-205ENST00000494284 SSH2Q76I76 1423 aa15.63■□□□□ 0.09
PHF3-205ENST00000494284 HDAC1Q13547 482 aaPredicted RBP15.62■□□□□ 0.09
PHF3-205ENST00000494284 LMOD2Q6P5Q4 547 aa15.62■□□□□ 0.09
PHF3-205ENST00000494284 BECN1Q14457 450 aa15.61■□□□□ 0.09
PHF3-205ENST00000494284 SMC5Q8IY18 1101 aa15.61■□□□□ 0.09
PHF3-205ENST00000494284 C16orf71Q8IYS4 520 aaPredicted RBP15.61■□□□□ 0.09
PHF3-205ENST00000494284 ZNF428Q96B54 188 aa15.61■□□□□ 0.09
PHF3-205ENST00000494284 TBC1D32Q96NH3 1257 aa15.61■□□□□ 0.09
PHF3-205ENST00000494284 SLC4A10Q6U841 1118 aa15.61■□□□□ 0.09
PHF3-205ENST00000494284 GZF1Q9H116 711 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms