RNA–Protein interactions for RNA: ENST00000486964.5

POLR1A-208, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5

Gene POLR1A, Length 1,427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-208ENST00000486964 PIK3C2AO00443 1686 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 MSH6P52701 1360 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 KIF24Q5T7B8 1368 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 MAP3K19Q56UN5 1328 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 KRT28Q7Z3Y7 464 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 TCP11L2Q8N4U5 519 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
POLR1A-208ENST00000486964 WWC1Q8IX03 1113 aa12.52□□□□□ -0.41
POLR1A-208ENST00000486964 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.41
POLR1A-208ENST00000486964 PNNQ9H307 717 aaKnown RBP12.52□□□□□ -0.41
POLR1A-208ENST00000486964 RCAN3Q9UKA8 241 aa12.52□□□□□ -0.41
POLR1A-208ENST00000486964 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.41
POLR1A-208ENST00000486964 SBNO1A3KN83 1393 aa12.51□□□□□ -0.41
POLR1A-208ENST00000486964 USP19O94966 1318 aa12.51□□□□□ -0.41
POLR1A-208ENST00000486964 TCERG1O14776 1098 aaKnown RBP12.51□□□□□ -0.41
POLR1A-208ENST00000486964 U2SURPO15042 1029 aaKnown RBP12.51□□□□□ -0.41
POLR1A-208ENST00000486964 PPM1GO15355 546 aaPredicted RBP12.51□□□□□ -0.41
POLR1A-208ENST00000486964 SLFN5Q08AF3 891 aa12.51□□□□□ -0.41
POLR1A-208ENST00000486964 EIF4A2Q14240 407 aaKnown RBP12.51□□□□□ -0.41
POLR1A-208ENST00000486964 HSP90AB2PQ58FF8 381 aa12.51□□□□□ -0.41
POLR1A-208ENST00000486964 XIRP1Q702N8 1843 aaKnown RBP12.51□□□□□ -0.41
POLR1A-208ENST00000486964 MAP2P11137 1827 aaKnown RBP12.5□□□□□ -0.41
POLR1A-208ENST00000486964 PAK3O75914 559 aaPredicted RBP12.5□□□□□ -0.41
POLR1A-208ENST00000486964 MS4A1P11836 297 aa12.5□□□□□ -0.41
POLR1A-208ENST00000486964 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
POLR1A-208ENST00000486964 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
POLR1A-208ENST00000486964 WDR63Q8IWG1 891 aa12.5□□□□□ -0.41
POLR1A-208ENST00000486964 SLAIN2Q9P270 581 aa12.5□□□□□ -0.41
POLR1A-208ENST00000486964 MARF1Q9Y4F3 1742 aaKnown RBP12.5□□□□□ -0.41
POLR1A-208ENST00000486964 KIF1AQ12756 1690 aa12.5□□□□□ -0.41
POLR1A-208ENST00000486964 TMPOP42166 694 aaKnown RBP12.49□□□□□ -0.41
POLR1A-208ENST00000486964 NUTM2GQ5VZR2 741 aa12.49□□□□□ -0.41
POLR1A-208ENST00000486964 BRINP3Q76B58 766 aa12.49□□□□□ -0.41
POLR1A-208ENST00000486964 KCNH5Q8NCM2 988 aa12.49□□□□□ -0.41
POLR1A-208ENST00000486964 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
POLR1A-208ENST00000486964 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
POLR1A-208ENST00000486964 FLT4P35916 1363 aa12.49□□□□□ -0.41
POLR1A-208ENST00000486964 PEAK1Q9H792 1746 aa12.49□□□□□ -0.41
POLR1A-208ENST00000486964 IPO9Q96P70 1041 aaKnown RBP12.48□□□□□ -0.41
POLR1A-208ENST00000486964 TRPM3Q9HCF6 1732 aaPredicted RBP12.48□□□□□ -0.41
POLR1A-208ENST00000486964 SLIT3O75094 1523 aa12.48□□□□□ -0.41
POLR1A-208ENST00000486964 NFAT5O94916 1531 aa12.48□□□□□ -0.41
POLR1A-208ENST00000486964 NPHP3Q7Z494 1330 aa12.48□□□□□ -0.41
POLR1A-208ENST00000486964 GCP02774 474 aa12.47□□□□□ -0.41
POLR1A-208ENST00000486964 HOXC9P31274 260 aa12.47□□□□□ -0.41
POLR1A-208ENST00000486964 XPCQ01831 940 aaPredicted RBP12.47□□□□□ -0.41
POLR1A-208ENST00000486964 ARHGEF25Q86VW2 580 aa12.47□□□□□ -0.41
POLR1A-208ENST00000486964 IP6K1Q92551 441 aa12.47□□□□□ -0.41
POLR1A-208ENST00000486964 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
POLR1A-208ENST00000486964 E9PSI1 815 aa12.46□□□□□ -0.41
POLR1A-208ENST00000486964 PHACTR3Q96KR7 559 aa12.46□□□□□ -0.41
POLR1A-208ENST00000486964 BCL11AQ9H165 835 aa12.46□□□□□ -0.41
POLR1A-208ENST00000486964 RTL1A6NKG5 1358 aa12.46□□□□□ -0.41
POLR1A-208ENST00000486964 PXDNQ92626 1479 aa12.46□□□□□ -0.41
POLR1A-208ENST00000486964 SOS2Q07890 1332 aaPredicted RBP12.46□□□□□ -0.42
POLR1A-208ENST00000486964 SPATA31A3Q5VYP0 1347 aa12.46□□□□□ -0.42
POLR1A-208ENST00000486964 PRKAR2BP31323 418 aa12.45□□□□□ -0.42
POLR1A-208ENST00000486964 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
POLR1A-208ENST00000486964 RRP7AQ9Y3A4 280 aaKnown RBP12.45□□□□□ -0.42
POLR1A-208ENST00000486964 AMPHP49418 695 aa12.45□□□□□ -0.42
POLR1A-208ENST00000486964 KDRP35968 1356 aa12.45□□□□□ -0.42
POLR1A-208ENST00000486964 IGSF1Q8N6C5 1336 aa12.44□□□□□ -0.42
POLR1A-208ENST00000486964 SOX12O15370 315 aa12.44□□□□□ -0.42
POLR1A-208ENST00000486964 HMOX1P09601 288 aa12.44□□□□□ -0.42
POLR1A-208ENST00000486964 NFE2L2Q16236 605 aa12.44□□□□□ -0.42
POLR1A-208ENST00000486964 EYA1Q99502 592 aa12.44□□□□□ -0.42
POLR1A-208ENST00000486964 ARHGEF10O15013 1369 aa12.44□□□□□ -0.42
POLR1A-208ENST00000486964 RGPD1P0DJD0 1748 aa12.43□□□□□ -0.42
POLR1A-208ENST00000486964 IL16Q14005 1332 aa12.43□□□□□ -0.42
POLR1A-208ENST00000486964 ALS2Q96Q42 1657 aa12.43□□□□□ -0.42
POLR1A-208ENST00000486964 SULT6B1Q6IMI4 303 aa12.43□□□□□ -0.42
POLR1A-208ENST00000486964 AEBP1Q8IUX7 1158 aa12.43□□□□□ -0.42
POLR1A-208ENST00000486964 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
POLR1A-208ENST00000486964 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
POLR1A-208ENST00000486964 RIPK4P57078 832 aa12.42□□□□□ -0.42
POLR1A-208ENST00000486964 NEUROD2Q15784 382 aa12.42□□□□□ -0.42
POLR1A-208ENST00000486964 PHRF1Q9P1Y6 1649 aaKnown RBP12.42□□□□□ -0.42
POLR1A-208ENST00000486964 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
POLR1A-208ENST00000486964 RTL5Q5HYW3 569 aaPredicted RBP12.41□□□□□ -0.42
POLR1A-208ENST00000486964 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.41□□□□□ -0.42
POLR1A-208ENST00000486964 RGS17Q9UGC6 210 aaPredicted RBP12.41□□□□□ -0.42
POLR1A-208ENST00000486964 EXOC6Q8TAG9 804 aa12.4□□□□□ -0.42
POLR1A-208ENST00000486964 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
POLR1A-208ENST00000486964 ZNF853P0CG23 659 aa12.38□□□□□ -0.43
POLR1A-208ENST00000486964 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
POLR1A-208ENST00000486964 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
POLR1A-208ENST00000486964 CPDO75976 1380 aa12.38□□□□□ -0.43
POLR1A-208ENST00000486964 NEFMP07197 916 aa12.37□□□□□ -0.43
POLR1A-208ENST00000486964 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
POLR1A-208ENST00000486964 NBPF6Q5VWK0 638 aa12.37□□□□□ -0.43
POLR1A-208ENST00000486964 NBPF4Q96M43 638 aa12.37□□□□□ -0.43
POLR1A-208ENST00000486964 MYH16Q9H6N6 1097 aa12.37□□□□□ -0.43
POLR1A-208ENST00000486964 USP35Q9P2H5 1018 aa12.36□□□□□ -0.43
POLR1A-208ENST00000486964 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
POLR1A-208ENST00000486964 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
POLR1A-208ENST00000486964 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
POLR1A-208ENST00000486964 MTHFSDQ2M296 383 aaKnown RBP12.35□□□□□ -0.43
POLR1A-208ENST00000486964 CABLES1Q8TDN4 633 aa12.35□□□□□ -0.43
POLR1A-208ENST00000486964 BACH2Q9BYV9 841 aa12.35□□□□□ -0.43
POLR1A-208ENST00000486964 ROBO1Q9Y6N7 1651 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms