RNA–Protein interactions for RNA: ENST00000484181.5

PCCB-217, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-217ENST00000484181 ZNF428Q96B54 188 aa21.34■■□□□ 1.01
PCCB-217ENST00000484181 PEAK1Q9H792 1746 aa21.33■■□□□ 1
PCCB-217ENST00000484181 NLRP6P59044 892 aa21.33■■□□□ 1
PCCB-217ENST00000484181 TCERG1O14776 1098 aaKnown RBP21.32■■□□□ 1
PCCB-217ENST00000484181 GNAI1P63096 354 aa21.32■■□□□ 1
PCCB-217ENST00000484181 FRAT1Q92837 279 aaPredicted RBP21.32■■□□□ 1
PCCB-217ENST00000484181 MAP3K19Q56UN5 1328 aa21.31■■□□□ 1
PCCB-217ENST00000484181 AMPHP49418 695 aa21.31■■□□□ 1
PCCB-217ENST00000484181 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
PCCB-217ENST00000484181 IFT57Q9NWB7 429 aa21.31■■□□□ 1
PCCB-217ENST00000484181 RGPD1P0DJD0 1748 aa21.31■■□□□ 1
PCCB-217ENST00000484181 RTL1A6NKG5 1358 aa21.31■■□□□ 1
PCCB-217ENST00000484181 EXOSC9Q06265 439 aaKnown RBP21.31■■□□□ 1
PCCB-217ENST00000484181 ABTB2Q8N961 1025 aa21.3■■□□□ 1
PCCB-217ENST00000484181 PHACTR3Q96KR7 559 aa21.3■■□□□ 1
PCCB-217ENST00000484181 ZKSCAN2Q63HK3 967 aa21.29■■□□□ 1
PCCB-217ENST00000484181 SULT6B1Q6IMI4 303 aa21.29■■□□□ 1
PCCB-217ENST00000484181 KIF16BQ96L93 1317 aa21.29■■□□□ 1
PCCB-217ENST00000484181 PAK3O75914 559 aaPredicted RBP21.28■■□□□ 1
PCCB-217ENST00000484181 SMC4Q9NTJ3 1288 aa21.28■■□□□ 1
PCCB-217ENST00000484181 SOX12O15370 315 aa21.28■■□□□ 1
PCCB-217ENST00000484181 ALDH1L2Q3SY69 923 aa21.28■■□□□ 1
PCCB-217ENST00000484181 HSP90AB2PQ58FF8 381 aa21.28■■□□□ 1
PCCB-217ENST00000484181 KIF1AQ12756 1690 aa21.27■■□□□ 1
PCCB-217ENST00000484181 ESCO1Q5FWF5 840 aa21.27■■□□□ 1
PCCB-217ENST00000484181 KDM2BQ8NHM5 1336 aa21.26■□□□□ 0.99
PCCB-217ENST00000484181 HAP1P54257 671 aaPredicted RBP21.26■□□□□ 0.99
PCCB-217ENST00000484181 PSME1Q06323 249 aa21.26■□□□□ 0.99
PCCB-217ENST00000484181 PROSER2Q86WR7 435 aaPredicted RBP21.26■□□□□ 0.99
PCCB-217ENST00000484181 IPO8O15397 1037 aaKnown RBP21.25■□□□□ 0.99
PCCB-217ENST00000484181 FTSJ3Q8IY81 847 aaKnown RBP21.25■□□□□ 0.99
PCCB-217ENST00000484181 NCOA3Q9Y6Q9 1424 aa21.25■□□□□ 0.99
PCCB-217ENST00000484181 CLUAP1Q96AJ1 413 aa21.24■□□□□ 0.99
PCCB-217ENST00000484181 MARF1Q9Y4F3 1742 aaKnown RBP21.24■□□□□ 0.99
PCCB-217ENST00000484181 KDRP35968 1356 aa21.24■□□□□ 0.99
PCCB-217ENST00000484181 KCNH5Q8NCM2 988 aa21.24■□□□□ 0.99
PCCB-217ENST00000484181 CFAP44Q96MT7 982 aa21.24■□□□□ 0.99
PCCB-217ENST00000484181 BCL2L13Q9BXK5 485 aa21.23■□□□□ 0.99
PCCB-217ENST00000484181 LAS1LQ9Y4W2 734 aaKnown RBP21.23■□□□□ 0.99
PCCB-217ENST00000484181 DCCP43146 1447 aa21.23■□□□□ 0.99
PCCB-217ENST00000484181 IGSF1Q8N6C5 1336 aa21.23■□□□□ 0.99
PCCB-217ENST00000484181 PANK1Q8TE04 598 aa21.22■□□□□ 0.99
PCCB-217ENST00000484181 COG6Q9Y2V7 657 aa21.22■□□□□ 0.99
PCCB-217ENST00000484181 DLG5Q8TDM6 1919 aa21.22■□□□□ 0.99
PCCB-217ENST00000484181 DZIP1LQ8IYY4 767 aaKnown RBP21.21■□□□□ 0.99
PCCB-217ENST00000484181 C19orf44Q9H6X5 657 aa21.21■□□□□ 0.99
PCCB-217ENST00000484181 ZNF853P0CG23 659 aa21.21■□□□□ 0.99
PCCB-217ENST00000484181 HOXC9P31274 260 aa21.21■□□□□ 0.99
PCCB-217ENST00000484181 AEBP1Q8IUX7 1158 aa21.21■□□□□ 0.99
PCCB-217ENST00000484181 GAS2L2Q8NHY3 880 aa21.2■□□□□ 0.98
PCCB-217ENST00000484181 SSH1Q8WYL5 1049 aa21.2■□□□□ 0.98
PCCB-217ENST00000484181 BRPF1P55201 1214 aaPredicted RBP21.19■□□□□ 0.98
PCCB-217ENST00000484181 MVPQ14764 893 aaKnown RBP21.19■□□□□ 0.98
PCCB-217ENST00000484181 ATF7IPQ6VMQ6 1270 aa21.18■□□□□ 0.98
PCCB-217ENST00000484181 RBM33Q96EV2 1170 aaKnown RBP21.18■□□□□ 0.98
PCCB-217ENST00000484181 NFAT5O94916 1531 aa21.17■□□□□ 0.98
PCCB-217ENST00000484181 NUTM2GQ5VZR2 741 aa21.17■□□□□ 0.98
PCCB-217ENST00000484181 RTF1Q92541 710 aaKnown RBP21.17■□□□□ 0.98
PCCB-217ENST00000484181 CHMP4BQ9H444 224 aaKnown RBP21.17■□□□□ 0.98
PCCB-217ENST00000484181 MBIPQ9NS73 344 aa21.17■□□□□ 0.98
PCCB-217ENST00000484181 DDX19BQ9UMR2 479 aa21.17■□□□□ 0.98
PCCB-217ENST00000484181 C1orf167Q5SNV9 1468 aa21.17■□□□□ 0.98
PCCB-217ENST00000484181 PHRF1Q9P1Y6 1649 aaKnown RBP21.17■□□□□ 0.98
PCCB-217ENST00000484181 ATF3P18847 181 aa21.15■□□□□ 0.98
PCCB-217ENST00000484181 THUMPD2Q9BTF0 503 aaKnown RBP21.15■□□□□ 0.98
PCCB-217ENST00000484181 HTATSF1O43719 755 aaKnown RBP21.15■□□□□ 0.98
PCCB-217ENST00000484181 EYA1Q99502 592 aa21.15■□□□□ 0.98
PCCB-217ENST00000484181 LTN1O94822 1766 aa21.14■□□□□ 0.98
PCCB-217ENST00000484181 TRIM27P14373 513 aa21.14■□□□□ 0.97
PCCB-217ENST00000484181 SLIT3O75094 1523 aa21.14■□□□□ 0.97
PCCB-217ENST00000484181 TWISTNBQ3B726 338 aaPredicted RBP21.13■□□□□ 0.97
PCCB-217ENST00000484181 IP6K1Q92551 441 aa21.13■□□□□ 0.97
PCCB-217ENST00000484181 ARHGAP45Q92619 1136 aa21.13■□□□□ 0.97
PCCB-217ENST00000484181 NOB1Q9ULX3 412 aaKnown RBP21.13■□□□□ 0.97
PCCB-217ENST00000484181 RLBP1P12271 317 aa21.12■□□□□ 0.97
PCCB-217ENST00000484181 MST1RQ04912 1400 aa21.12■□□□□ 0.97
PCCB-217ENST00000484181 TMEM94Q12767 1356 aa21.12■□□□□ 0.97
PCCB-217ENST00000484181 KIAA0232Q92628 1395 aa21.12■□□□□ 0.97
PCCB-217ENST00000484181 VAMP4O75379 141 aa21.12■□□□□ 0.97
PCCB-217ENST00000484181 ORAI2Q96SN7 254 aa21.12■□□□□ 0.97
PCCB-217ENST00000484181 FAM83GA6ND36 823 aa21.11■□□□□ 0.97
PCCB-217ENST00000484181 RWDD1Q9H446 243 aaPredicted RBP21.11■□□□□ 0.97
PCCB-217ENST00000484181 TRPM3Q9HCF6 1732 aaPredicted RBP21.1■□□□□ 0.97
PCCB-217ENST00000484181 FOXO3O43524 673 aa21.1■□□□□ 0.97
PCCB-217ENST00000484181 CADPS2Q86UW7 1296 aa21.1■□□□□ 0.97
PCCB-217ENST00000484181 ITPRIPQ8IWB1 547 aa21.1■□□□□ 0.97
PCCB-217ENST00000484181 CHL1O00533 1208 aa21.09■□□□□ 0.97
PCCB-217ENST00000484181 MTHFSDQ2M296 383 aaKnown RBP21.09■□□□□ 0.97
PCCB-217ENST00000484181 KRT28Q7Z3Y7 464 aa21.09■□□□□ 0.97
PCCB-217ENST00000484181 MSH6P52701 1360 aa21.08■□□□□ 0.97
PCCB-217ENST00000484181 USP19O94966 1318 aa21.08■□□□□ 0.97
PCCB-217ENST00000484181 DCTN1Q14203 1278 aa21.08■□□□□ 0.96
PCCB-217ENST00000484181 ANP32AP39687 249 aaKnown RBP21.07■□□□□ 0.96
PCCB-217ENST00000484181 MRPL50Q8N5N7 158 aaKnown RBP21.07■□□□□ 0.96
PCCB-217ENST00000484181 API5Q9BZZ5 524 aaKnown RBP21.07■□□□□ 0.96
PCCB-217ENST00000484181 CRB1P82279 1406 aa21.07■□□□□ 0.96
PCCB-217ENST00000484181 MCM10Q7L590 875 aa21.06■□□□□ 0.96
PCCB-217ENST00000484181 MAP3K5Q99683 1374 aa21.06■□□□□ 0.96
PCCB-217ENST00000484181 GNAT3A8MTJ3 354 aa21.05■□□□□ 0.96
PCCB-217ENST00000484181 PDE4AP27815 886 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms