RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 CABLES1Q8TDN4 633 aa14.93□□□□□ -0.02
PCCB-214ENST00000478469 IFT57Q9NWB7 429 aa14.93□□□□□ -0.02
PCCB-214ENST00000478469 MIS18AQ9NYP9 233 aa14.93□□□□□ -0.02
PCCB-214ENST00000478469 PIK3C2GO75747 1445 aa14.93□□□□□ -0.02
PCCB-214ENST00000478469 NPC1L1Q9UHC9 1359 aa14.93□□□□□ -0.02
PCCB-214ENST00000478469 LMTK3Q96Q04 1460 aa14.93□□□□□ -0.02
PCCB-214ENST00000478469 ATF7IPQ6VMQ6 1270 aa14.92□□□□□ -0.02
PCCB-214ENST00000478469 FLT4P35916 1363 aa14.92□□□□□ -0.02
PCCB-214ENST00000478469 EDC4Q6P2E9 1401 aaKnown RBP14.92□□□□□ -0.02
PCCB-214ENST00000478469 MPRIPQ6WCQ1 1025 aa14.92□□□□□ -0.02
PCCB-214ENST00000478469 PHF23Q9BUL5 403 aaPredicted RBP14.92□□□□□ -0.02
PCCB-214ENST00000478469 EIF4A2Q14240 407 aaKnown RBP14.92□□□□□ -0.02
PCCB-214ENST00000478469 NPHP4O75161 1426 aaPredicted RBP14.91□□□□□ -0.02
PCCB-214ENST00000478469 GLI2P10070 1586 aa14.91□□□□□ -0.02
PCCB-214ENST00000478469 LRRC59Q96AG4 307 aaKnown RBP14.91□□□□□ -0.02
PCCB-214ENST00000478469 MAP3K19Q56UN5 1328 aa14.9□□□□□ -0.02
PCCB-214ENST00000478469 DUSP27Q5VZP5 1158 aa14.9□□□□□ -0.02
PCCB-214ENST00000478469 FRAT2O75474 233 aaPredicted RBP14.9□□□□□ -0.02
PCCB-214ENST00000478469 G3BP1Q13283 466 aaKnown RBP eCLIP14.9□□□□□ -0.024e-6■■■□□ 16.9
PCCB-214ENST00000478469 DIP2CQ9Y2E4 1556 aa14.9□□□□□ -0.02
PCCB-214ENST00000478469 EXOC5O00471 708 aa14.89□□□□□ -0.03
PCCB-214ENST00000478469 NBR1Q14596 966 aa14.89□□□□□ -0.03
PCCB-214ENST00000478469 IFNL2Q8IZJ0 200 aa14.89□□□□□ -0.03
PCCB-214ENST00000478469 SLAIN2Q9P270 581 aa14.89□□□□□ -0.03
PCCB-214ENST00000478469 HSP90AB4PQ58FF6 505 aa14.89□□□□□ -0.03
PCCB-214ENST00000478469 HSCBQ8IWL3 235 aa14.89□□□□□ -0.03
PCCB-214ENST00000478469 ZFYVE9O95405 1425 aa14.89□□□□□ -0.03
PCCB-214ENST00000478469 A2ML1A8K2U0 1454 aa14.89□□□□□ -0.03
PCCB-214ENST00000478469 MFAP1P55081 439 aaKnown RBP14.89□□□□□ -0.03
PCCB-214ENST00000478469 INO80Q9ULG1 1556 aaPredicted RBP14.89□□□□□ -0.03
PCCB-214ENST00000478469 RNF17Q9BXT8 1623 aaKnown RBP14.89□□□□□ -0.03
PCCB-214ENST00000478469 NAP1L2Q9ULW6 460 aaPredicted RBP14.88□□□□□ -0.03
PCCB-214ENST00000478469 PTCD1O75127 700 aaKnown RBP14.88□□□□□ -0.03
PCCB-214ENST00000478469 KIF6Q6ZMV9 814 aa14.88□□□□□ -0.03
PCCB-214ENST00000478469 AEBP1Q8IUX7 1158 aa14.88□□□□□ -0.03
PCCB-214ENST00000478469 TMOD3Q9NYL9 352 aa14.88□□□□□ -0.03
PCCB-214ENST00000478469 FANCIQ9NVI1 1328 aa14.88□□□□□ -0.03
PCCB-214ENST00000478469 GOLGA6L22H0YM25 854 aa14.87□□□□□ -0.03
PCCB-214ENST00000478469 MYL6BP14649 208 aa14.87□□□□□ -0.03
PCCB-214ENST00000478469 CCT4P50991 539 aaKnown RBP14.87□□□□□ -0.03
PCCB-214ENST00000478469 RBM19Q9Y4C8 960 aaKnown RBP14.87□□□□□ -0.03
PCCB-214ENST00000478469 SRCIN1Q9C0H9 1055 aa14.87□□□□□ -0.03
PCCB-214ENST00000478469 FAM83GA6ND36 823 aa14.86□□□□□ -0.03
PCCB-214ENST00000478469 G3V3G9 751 aa14.86□□□□□ -0.03
PCCB-214ENST00000478469 DCAF8Q5TAQ9 597 aa14.86□□□□□ -0.03
PCCB-214ENST00000478469 CLTCL1P53675 1640 aa14.86□□□□□ -0.03
PCCB-214ENST00000478469 TMEM94Q12767 1356 aa14.86□□□□□ -0.03
PCCB-214ENST00000478469 RILPL2Q969X0 211 aa14.86□□□□□ -0.03
PCCB-214ENST00000478469 LNPKQ9C0E8 428 aa14.86□□□□□ -0.03
PCCB-214ENST00000478469 ROBO2Q9HCK4 1378 aa14.86□□□□□ -0.03
PCCB-214ENST00000478469 IFIT2P09913 472 aaKnown RBP14.86□□□□□ -0.03
PCCB-214ENST00000478469 SSH1Q8WYL5 1049 aa14.86□□□□□ -0.03
PCCB-214ENST00000478469 IP6K1Q92551 441 aa14.86□□□□□ -0.03
PCCB-214ENST00000478469 RARSP54136 660 aaKnown RBP14.85□□□□□ -0.03
PCCB-214ENST00000478469 LMTK2Q8IWU2 1503 aa14.85□□□□□ -0.03
PCCB-214ENST00000478469 PIK3R4Q99570 1358 aa14.85□□□□□ -0.03
PCCB-214ENST00000478469 HOXC9P31274 260 aa14.85□□□□□ -0.03
PCCB-214ENST00000478469 EYA1Q99502 592 aa14.85□□□□□ -0.03
PCCB-214ENST00000478469 NCLP19338 710 aaKnown RBP14.84□□□□□ -0.03
PCCB-214ENST00000478469 KIDINS220Q9ULH0 1771 aa14.84□□□□□ -0.03
PCCB-214ENST00000478469 GNAI2P04899 355 aa14.84□□□□□ -0.03
PCCB-214ENST00000478469 ANP32BQ92688 251 aaKnown RBP14.84□□□□□ -0.03
PCCB-214ENST00000478469 MVPQ14764 893 aaKnown RBP14.84□□□□□ -0.03
PCCB-214ENST00000478469 NKTRP30414 1462 aaKnown RBP14.84□□□□□ -0.03
PCCB-214ENST00000478469 SPHKAPQ2M3C7 1700 aa14.84□□□□□ -0.03
PCCB-214ENST00000478469 IL16Q14005 1332 aa14.84□□□□□ -0.03
PCCB-214ENST00000478469 STARD3NLO95772 234 aa14.84□□□□□ -0.03
PCCB-214ENST00000478469 ALDH1L2Q3SY69 923 aa14.84□□□□□ -0.03
PCCB-214ENST00000478469 AGLP35573 1532 aa14.83□□□□□ -0.03
PCCB-214ENST00000478469 KDM5CP41229 1560 aa14.83□□□□□ -0.03
PCCB-214ENST00000478469 KAT6BQ8WYB5 2073 aa14.83□□□□□ -0.04
PCCB-214ENST00000478469 FAM177BA6PVY3 158 aa14.83□□□□□ -0.04
PCCB-214ENST00000478469 HSP90B1P14625 803 aaKnown RBP14.83□□□□□ -0.04
PCCB-214ENST00000478469 FAM161AQ3B820 660 aa14.83□□□□□ -0.04
PCCB-214ENST00000478469 SURF6O75683 361 aaKnown RBP14.82□□□□□ -0.04
PCCB-214ENST00000478469 ABCA6Q8N139 1617 aa14.82□□□□□ -0.04
PCCB-214ENST00000478469 C1orf115Q9H7X2 142 aa14.82□□□□□ -0.04
PCCB-214ENST00000478469 ZCRB1Q8TBF4 217 aaKnown RBP14.82□□□□□ -0.04
PCCB-214ENST00000478469 DDX17Q92841 729 aaKnown RBP14.82□□□□□ -0.04
PCCB-214ENST00000478469 CEP152O94986 1710 aa14.82□□□□□ -0.04
PCCB-214ENST00000478469 FAM135BQ49AJ0 1406 aa14.82□□□□□ -0.04
PCCB-214ENST00000478469 CCDC27Q2M243 656 aa14.81□□□□□ -0.04
PCCB-214ENST00000478469 MBIPQ9NS73 344 aa14.81□□□□□ -0.04
PCCB-214ENST00000478469 TAOK2Q9UL54 1235 aa14.81□□□□□ -0.04
PCCB-214ENST00000478469 PDE4AP27815 886 aa14.8□□□□□ -0.04
PCCB-214ENST00000478469 FMNL2Q96PY5 1086 aa14.8□□□□□ -0.04
PCCB-214ENST00000478469 E9PCH4 1651 aa14.8□□□□□ -0.04
PCCB-214ENST00000478469 SBNO1A3KN83 1393 aa14.8□□□□□ -0.04
PCCB-214ENST00000478469 SF3B2Q13435 895 aaKnown RBP14.8□□□□□ -0.04
PCCB-214ENST00000478469 MAP3K4Q9Y6R4 1608 aa14.8□□□□□ -0.04
PCCB-214ENST00000478469 CLASRPQ8N2M8 674 aaKnown RBP14.8□□□□□ -0.04
PCCB-214ENST00000478469 MTHFSDQ2M296 383 aaKnown RBP14.79□□□□□ -0.04
PCCB-214ENST00000478469 PHACTR3Q96KR7 559 aa14.79□□□□□ -0.04
PCCB-214ENST00000478469 C8orf37Q96NL8 207 aa14.79□□□□□ -0.04
PCCB-214ENST00000478469 KDM5AP29375 1690 aaKnown RBP14.79□□□□□ -0.04
PCCB-214ENST00000478469 LRRFIP1Q32MZ4 808 aaKnown RBP14.79□□□□□ -0.04
PCCB-214ENST00000478469 AKAP4Q5JQC9 854 aa14.79□□□□□ -0.04
PCCB-214ENST00000478469 ZNF335Q9H4Z2 1342 aaPredicted RBP14.79□□□□□ -0.04
PCCB-214ENST00000478469 TMEM57Q8N5G2 664 aa14.79□□□□□ -0.04
PCCB-214ENST00000478469 DBF4Q9UBU7 674 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms