RNA–Protein interactions for RNA: ENST00000471909.1

RRP1-202, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 2,544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-202ENST00000471909 PMFBP1Q8TBY8 1022 aa22.3■■□□□ 1.16
RRP1-202ENST00000471909 XRN1Q8IZH2 1706 aaKnown RBP22.3■■□□□ 1.16
RRP1-202ENST00000471909 KCNA6P17658 529 aa22.29■■□□□ 1.16
RRP1-202ENST00000471909 RIMS1Q86UR5 1692 aaKnown RBP22.28■■□□□ 1.16
RRP1-202ENST00000471909 IGHDP01880 384 aa22.28■■□□□ 1.16
RRP1-202ENST00000471909 IL27Q8NEV9 243 aa22.27■■□□□ 1.16
RRP1-202ENST00000471909 PIK3R4Q99570 1358 aa22.26■■□□□ 1.15
RRP1-202ENST00000471909 SSH1Q8WYL5 1049 aa22.26■■□□□ 1.15
RRP1-202ENST00000471909 SMC4Q9NTJ3 1288 aa22.25■■□□□ 1.15
RRP1-202ENST00000471909 USP31Q70CQ4 1352 aa22.25■■□□□ 1.15
RRP1-202ENST00000471909 ZKSCAN2Q63HK3 967 aa22.25■■□□□ 1.15
RRP1-202ENST00000471909 EIF4A2Q14240 407 aaKnown RBP22.24■■□□□ 1.15
RRP1-202ENST00000471909 THUMPD2Q9BTF0 503 aaKnown RBP22.24■■□□□ 1.15
RRP1-202ENST00000471909 NGDNQ8NEJ9 315 aaKnown RBP22.24■■□□□ 1.15
RRP1-202ENST00000471909 TTC21AQ8NDW8 1320 aa22.23■■□□□ 1.15
RRP1-202ENST00000471909 AAMPQ13685 434 aa22.23■■□□□ 1.15
RRP1-202ENST00000471909 NALCNQ8IZF0 1738 aa22.22■■□□□ 1.15
RRP1-202ENST00000471909 ANKLE2Q86XL3 938 aa22.22■■□□□ 1.15
RRP1-202ENST00000471909 HSP90AB2PQ58FF8 381 aa22.2■■□□□ 1.14
RRP1-202ENST00000471909 DZIP1LQ8IYY4 767 aaKnown RBP22.2■■□□□ 1.14
RRP1-202ENST00000471909 RGPD8O14715 1765 aaPredicted RBP22.2■■□□□ 1.14
RRP1-202ENST00000471909 SOX12O15370 315 aa22.2■■□□□ 1.14
RRP1-202ENST00000471909 MVPQ14764 893 aaKnown RBP22.2■■□□□ 1.14
RRP1-202ENST00000471909 AEBP1Q8IUX7 1158 aa22.2■■□□□ 1.14
RRP1-202ENST00000471909 PCDHB15Q9Y5E8 787 aa22.2■■□□□ 1.14
RRP1-202ENST00000471909 ANKARQ7Z5J8 1434 aa22.2■■□□□ 1.14
RRP1-202ENST00000471909 TRIM27P14373 513 aa22.19■■□□□ 1.14
RRP1-202ENST00000471909 CALD1Q05682 793 aaKnown RBP22.19■■□□□ 1.14
RRP1-202ENST00000471909 PEAK1Q9H792 1746 aa22.19■■□□□ 1.14
RRP1-202ENST00000471909 FTSJ3Q8IY81 847 aaKnown RBP22.19■■□□□ 1.14
RRP1-202ENST00000471909 SULT6B1Q6IMI4 303 aa22.18■■□□□ 1.14
RRP1-202ENST00000471909 NOB1Q9ULX3 412 aaKnown RBP22.18■■□□□ 1.14
RRP1-202ENST00000471909 ADAMTSL3P82987 1691 aa22.17■■□□□ 1.14
RRP1-202ENST00000471909 ZNF853P0CG23 659 aa22.17■■□□□ 1.14
RRP1-202ENST00000471909 RGS3P49796 1198 aa22.17■■□□□ 1.14
RRP1-202ENST00000471909 IFT57Q9NWB7 429 aa22.17■■□□□ 1.14
RRP1-202ENST00000471909 ATF7IPQ6VMQ6 1270 aa22.17■■□□□ 1.14
RRP1-202ENST00000471909 MAP3K19Q56UN5 1328 aa22.17■■□□□ 1.14
RRP1-202ENST00000471909 GNAI1P63096 354 aa22.16■■□□□ 1.14
RRP1-202ENST00000471909 LMOD3Q0VAK6 560 aa22.16■■□□□ 1.14
RRP1-202ENST00000471909 RTN4Q9NQC3 1192 aaKnown RBP22.16■■□□□ 1.14
RRP1-202ENST00000471909 ZNF142P52746 1687 aaPredicted RBP22.16■■□□□ 1.14
RRP1-202ENST00000471909 FAM83GA6ND36 823 aa22.16■■□□□ 1.14
RRP1-202ENST00000471909 ALDH1L2Q3SY69 923 aa22.16■■□□□ 1.14
RRP1-202ENST00000471909 ANO8Q9HCE9 1232 aaPredicted RBP22.15■■□□□ 1.14
RRP1-202ENST00000471909 MBIPQ9NS73 344 aa22.15■■□□□ 1.14
RRP1-202ENST00000471909 DAXXQ9UER7 740 aaPredicted RBP22.15■■□□□ 1.14
RRP1-202ENST00000471909 KIF16BQ96L93 1317 aa22.13■■□□□ 1.13
RRP1-202ENST00000471909 FMN2Q9NZ56 1722 aa22.13■■□□□ 1.13
RRP1-202ENST00000471909 VAMP4O75379 141 aa22.13■■□□□ 1.13
RRP1-202ENST00000471909 DCTN1Q14203 1278 aa22.13■■□□□ 1.13
RRP1-202ENST00000471909 ZNF428Q96B54 188 aa22.13■■□□□ 1.13
RRP1-202ENST00000471909 CFAP44Q96MT7 982 aa22.13■■□□□ 1.13
RRP1-202ENST00000471909 PIK3C2AO00443 1686 aa22.12■■□□□ 1.13
RRP1-202ENST00000471909 DLG5Q8TDM6 1919 aa22.12■■□□□ 1.13
RRP1-202ENST00000471909 TSPYL6Q8N831 410 aa22.12■■□□□ 1.13
RRP1-202ENST00000471909 RBM33Q96EV2 1170 aaKnown RBP22.12■■□□□ 1.13
RRP1-202ENST00000471909 CHD2O14647 1828 aaKnown RBP22.11■■□□□ 1.13
RRP1-202ENST00000471909 GSE1Q14687 1217 aa22.11■■□□□ 1.13
RRP1-202ENST00000471909 RGPD1P0DJD0 1748 aa22.11■■□□□ 1.13
RRP1-202ENST00000471909 SBNO1A3KN83 1393 aa22.11■■□□□ 1.13
RRP1-202ENST00000471909 IPO8O15397 1037 aaKnown RBP22.11■■□□□ 1.13
RRP1-202ENST00000471909 NLRP6P59044 892 aa22.11■■□□□ 1.13
RRP1-202ENST00000471909 NFKBIBQ15653 356 aa22.11■■□□□ 1.13
RRP1-202ENST00000471909 FAM161AQ3B820 660 aa22.11■■□□□ 1.13
RRP1-202ENST00000471909 C8orf34Q49A92 452 aa22.11■■□□□ 1.13
RRP1-202ENST00000471909 FLT4P35916 1363 aa22.11■■□□□ 1.13
RRP1-202ENST00000471909 BRPF1P55201 1214 aaPredicted RBP22.1■■□□□ 1.13
RRP1-202ENST00000471909 ITPRIPQ8IWB1 547 aa22.1■■□□□ 1.13
RRP1-202ENST00000471909 TMEM57Q8N5G2 664 aa22.09■■□□□ 1.13
RRP1-202ENST00000471909 DDX19BQ9UMR2 479 aa22.09■■□□□ 1.13
RRP1-202ENST00000471909 RWDD1Q9H446 243 aaPredicted RBP22.08■■□□□ 1.13
RRP1-202ENST00000471909 ARHGEF10O15013 1369 aa22.08■■□□□ 1.12
RRP1-202ENST00000471909 ELL2O00472 640 aaPredicted RBP22.08■■□□□ 1.12
RRP1-202ENST00000471909 SLC4A3P48751 1232 aa22.08■■□□□ 1.12
RRP1-202ENST00000471909 NUTM2GQ5VZR2 741 aa22.08■■□□□ 1.12
RRP1-202ENST00000471909 AMPHP49418 695 aa22.07■■□□□ 1.12
RRP1-202ENST00000471909 SETD1BQ9UPS6 1966 aaKnown RBP22.07■■□□□ 1.12
RRP1-202ENST00000471909 MRPL50Q8N5N7 158 aaKnown RBP22.07■■□□□ 1.12
RRP1-202ENST00000471909 C8orf58Q8NAV2 365 aa22.07■■□□□ 1.12
RRP1-202ENST00000471909 TWISTNBQ3B726 338 aaPredicted RBP22.06■■□□□ 1.12
RRP1-202ENST00000471909 PHF8Q9UPP1 1060 aa22.06■■□□□ 1.12
RRP1-202ENST00000471909 ABTB2Q8N961 1025 aa22.05■■□□□ 1.12
RRP1-202ENST00000471909 MCM10Q7L590 875 aa22.04■■□□□ 1.12
RRP1-202ENST00000471909 NPHP4O75161 1426 aaPredicted RBP22.04■■□□□ 1.12
RRP1-202ENST00000471909 EYA1Q99502 592 aa22.03■■□□□ 1.12
RRP1-202ENST00000471909 ZBTB40Q9NUA8 1239 aa22.03■■□□□ 1.12
RRP1-202ENST00000471909 KDRP35968 1356 aa22.03■■□□□ 1.12
RRP1-202ENST00000471909 IGSF1Q8N6C5 1336 aa22.03■■□□□ 1.12
RRP1-202ENST00000471909 ADGRL3Q9HAR2 1447 aa22.03■■□□□ 1.12
RRP1-202ENST00000471909 PDZRN3Q9UPQ7 1066 aa22.02■■□□□ 1.12
RRP1-202ENST00000471909 MARF1Q9Y4F3 1742 aaKnown RBP22.02■■□□□ 1.12
RRP1-202ENST00000471909 ARHGAP45Q92619 1136 aa22.02■■□□□ 1.11
RRP1-202ENST00000471909 CHL1O00533 1208 aa22.01■■□□□ 1.11
RRP1-202ENST00000471909 HOXC9P31274 260 aa22.01■■□□□ 1.11
RRP1-202ENST00000471909 BRPF3Q9ULD4 1205 aa22.01■■□□□ 1.11
RRP1-202ENST00000471909 HDAC1Q13547 482 aaPredicted RBP22■■□□□ 1.11
RRP1-202ENST00000471909 MTHFSDQ2M296 383 aaKnown RBP22■■□□□ 1.11
RRP1-202ENST00000471909 KIF24Q5T7B8 1368 aa22■■□□□ 1.11
RRP1-202ENST00000471909 FOXO3O43524 673 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms