RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 CLCN1P35523 988 aa11□□□□□ -0.65
LINC00299-204ENST00000454043 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
LINC00299-204ENST00000454043 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
LINC00299-204ENST00000454043 NUP155O75694 1391 aa11□□□□□ -0.65
LINC00299-204ENST00000454043 DENND4BO75064 1496 aaPredicted RBP11□□□□□ -0.65
LINC00299-204ENST00000454043 TLL1O43897 1013 aa10.99□□□□□ -0.65
LINC00299-204ENST00000454043 GGCXP38435 758 aa10.99□□□□□ -0.65
LINC00299-204ENST00000454043 NEUROD1Q13562 356 aa10.99□□□□□ -0.65
LINC00299-204ENST00000454043 MAP3K4Q9Y6R4 1608 aa10.98□□□□□ -0.65
LINC00299-204ENST00000454043 FAM217BQ9NTX9 383 aaPredicted RBP10.98□□□□□ -0.65
LINC00299-204ENST00000454043 POGZQ7Z3K3 1410 aa10.98□□□□□ -0.65
LINC00299-204ENST00000454043 ADH1BP00325 375 aa10.97□□□□□ -0.65
LINC00299-204ENST00000454043 SLC27A5Q9Y2P5 690 aa10.97□□□□□ -0.65
LINC00299-204ENST00000454043 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
LINC00299-204ENST00000454043 DIP2BQ9P265 1576 aa10.97□□□□□ -0.65
LINC00299-204ENST00000454043 KDM6BO15054 1643 aa10.96□□□□□ -0.65
LINC00299-204ENST00000454043 ATP7AQ04656 1500 aa10.96□□□□□ -0.65
LINC00299-204ENST00000454043 MLH3Q9UHC1 1453 aa10.96□□□□□ -0.65
LINC00299-204ENST00000454043 KANK1Q14678 1352 aa10.96□□□□□ -0.65
LINC00299-204ENST00000454043 TONSLQ96HA7 1378 aa10.96□□□□□ -0.65
LINC00299-204ENST00000454043 PRKD2Q9BZL6 878 aa10.96□□□□□ -0.65
LINC00299-204ENST00000454043 ZFYVE16Q7Z3T8 1539 aa10.95□□□□□ -0.66
LINC00299-204ENST00000454043 RNF223E7ERA6 249 aa10.95□□□□□ -0.66
LINC00299-204ENST00000454043 AMHR2Q16671 573 aa10.95□□□□□ -0.66
LINC00299-204ENST00000454043 GRIPAP1Q4V328 841 aa10.95□□□□□ -0.66
LINC00299-204ENST00000454043 THAP11Q96EK4 314 aa10.95□□□□□ -0.66
LINC00299-204ENST00000454043 SIN3AQ96ST3 1273 aa10.95□□□□□ -0.66
LINC00299-204ENST00000454043 SPSB2Q99619 263 aa10.95□□□□□ -0.66
LINC00299-204ENST00000454043 SALL2Q9Y467 1007 aaPredicted RBP10.95□□□□□ -0.66
LINC00299-204ENST00000454043 KDM4AO75164 1064 aa10.94□□□□□ -0.66
LINC00299-204ENST00000454043 V9GY48 417 aaPredicted RBP10.94□□□□□ -0.66
LINC00299-204ENST00000454043 KDM5DQ9BY66 1539 aa10.94□□□□□ -0.66
LINC00299-204ENST00000454043 S1PR4O95977 384 aa10.93□□□□□ -0.66
LINC00299-204ENST00000454043 SSTR3P32745 418 aaPredicted RBP10.93□□□□□ -0.66
LINC00299-204ENST00000454043 BRICD5Q6PL45 260 aa10.93□□□□□ -0.66
LINC00299-204ENST00000454043 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
LINC00299-204ENST00000454043 SLC6A16Q9GZN6 736 aa10.93□□□□□ -0.66
LINC00299-204ENST00000454043 INO80Q9ULG1 1556 aaPredicted RBP10.93□□□□□ -0.66
LINC00299-204ENST00000454043 PZPP20742 1482 aa10.93□□□□□ -0.66
LINC00299-204ENST00000454043 ANKRD30BQ9BXX2 1392 aa10.92□□□□□ -0.66
LINC00299-204ENST00000454043 KDM5CP41229 1560 aa10.92□□□□□ -0.66
LINC00299-204ENST00000454043 PPEF1O14829 653 aaPredicted RBP10.92□□□□□ -0.66
LINC00299-204ENST00000454043 TRIM66O15016 1216 aa10.92□□□□□ -0.66
LINC00299-204ENST00000454043 KIF3BO15066 747 aa10.92□□□□□ -0.66
LINC00299-204ENST00000454043 RAPGEF3O95398 923 aa10.92□□□□□ -0.66
LINC00299-204ENST00000454043 BCANQ96GW7 911 aa10.92□□□□□ -0.66
LINC00299-204ENST00000454043 AK7Q96M32 723 aa10.92□□□□□ -0.66
LINC00299-204ENST00000454043 FMNL1O95466 1100 aaPredicted RBP10.91□□□□□ -0.66
LINC00299-204ENST00000454043 USP46P62068 366 aa10.91□□□□□ -0.66
LINC00299-204ENST00000454043 ANKLE1Q8NAG6 615 aa10.91□□□□□ -0.66
LINC00299-204ENST00000454043 A2MP01023 1474 aa10.91□□□□□ -0.66
LINC00299-204ENST00000454043 MAGI2Q86UL8 1455 aa10.91□□□□□ -0.66
LINC00299-204ENST00000454043 PPP1R15AO75807 674 aaPredicted RBP10.9□□□□□ -0.66
LINC00299-204ENST00000454043 FAM160A2Q8N612 972 aaPredicted RBP10.9□□□□□ -0.66
LINC00299-204ENST00000454043 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.67
LINC00299-204ENST00000454043 FAM135AQ9P2D6 1515 aa10.89□□□□□ -0.67
LINC00299-204ENST00000454043 UNC13BO14795 1591 aa10.89□□□□□ -0.67
LINC00299-204ENST00000454043 EIF2AK4Q9P2K8 1649 aaKnown RBP10.88□□□□□ -0.67
LINC00299-204ENST00000454043 EMID1Q96A84 441 aaPredicted RBP10.88□□□□□ -0.67
LINC00299-204ENST00000454043 TTLL12Q14166 644 aaPredicted RBP10.87□□□□□ -0.67
LINC00299-204ENST00000454043 KIDINS220Q9ULH0 1771 aa10.87□□□□□ -0.67
LINC00299-204ENST00000454043 RPRD2Q5VT52 1461 aaKnown RBP10.87□□□□□ -0.67
LINC00299-204ENST00000454043 HOXA2O43364 376 aa10.86□□□□□ -0.67
LINC00299-204ENST00000454043 RNF19BQ6ZMZ0 732 aa10.86□□□□□ -0.67
LINC00299-204ENST00000454043 IQGAP3Q86VI3 1631 aa10.86□□□□□ -0.67
LINC00299-204ENST00000454043 ZMYM4Q5VZL5 1548 aa10.85□□□□□ -0.67
LINC00299-204ENST00000454043 SLC19A1P41440 591 aa10.85□□□□□ -0.67
LINC00299-204ENST00000454043 Q3C1V9 767 aa10.85□□□□□ -0.67
LINC00299-204ENST00000454043 GIGYF2Q6Y7W6 1299 aaKnown RBP10.85□□□□□ -0.67
LINC00299-204ENST00000454043 NUTM1Q86Y26 1132 aa10.85□□□□□ -0.67
LINC00299-204ENST00000454043 HLA-CQ95604 372 aa10.85□□□□□ -0.67
LINC00299-204ENST00000454043 SLC24A3Q9HC58 644 aa10.85□□□□□ -0.67
LINC00299-204ENST00000454043 RICTORQ6R327 1708 aa10.84□□□□□ -0.67
LINC00299-204ENST00000454043 GGT6Q6P531 493 aa10.84□□□□□ -0.67
LINC00299-204ENST00000454043 LIAT1Q6ZQX7 453 aa10.84□□□□□ -0.67
LINC00299-204ENST00000454043 ATP10AO60312 1499 aa10.84□□□□□ -0.67
LINC00299-204ENST00000454043 TSPOAP1O95153 1857 aa10.84□□□□□ -0.67
LINC00299-204ENST00000454043 CCDC144AA2RUR9 1427 aa10.84□□□□□ -0.67
LINC00299-204ENST00000454043 WASHC2CQ9Y4E1 1318 aa10.84□□□□□ -0.67
LINC00299-204ENST00000454043 PARP9Q8IXQ6 854 aa10.83□□□□□ -0.68
LINC00299-204ENST00000454043 SPIRE2Q8WWL2 714 aa10.83□□□□□ -0.68
LINC00299-204ENST00000454043 L3MBTL2Q969R5 705 aa10.83□□□□□ -0.68
LINC00299-204ENST00000454043 KIF13AQ9H1H9 1805 aa10.83□□□□□ -0.68
LINC00299-204ENST00000454043 DEPDC5O75140 1603 aa10.83□□□□□ -0.68
LINC00299-204ENST00000454043 MSS51Q4VC12 460 aa10.82□□□□□ -0.68
LINC00299-204ENST00000454043 PPRC1Q5VV67 1664 aaKnown RBP10.82□□□□□ -0.68
LINC00299-204ENST00000454043 PRDM15P57071 1507 aaPredicted RBP10.81□□□□□ -0.68
LINC00299-204ENST00000454043 GUCA2AQ02747 115 aa10.81□□□□□ -0.68
LINC00299-204ENST00000454043 PDE4DQ08499 809 aa10.81□□□□□ -0.68
LINC00299-204ENST00000454043 PLA2G2CQ5R387 149 aa10.81□□□□□ -0.68
LINC00299-204ENST00000454043 SPRYD7Q5W111 196 aa10.81□□□□□ -0.68
LINC00299-204ENST00000454043 GFRA3O60609 400 aa10.8□□□□□ -0.68
LINC00299-204ENST00000454043 USB1Q9BQ65 265 aaKnown RBP10.8□□□□□ -0.68
LINC00299-204ENST00000454043 BEGAINQ9BUH8 593 aa10.8□□□□□ -0.68
LINC00299-204ENST00000454043 DIP2CQ9Y2E4 1556 aa10.8□□□□□ -0.68
LINC00299-204ENST00000454043 BCORL1Q5H9F3 1711 aa10.8□□□□□ -0.68
LINC00299-204ENST00000454043 ABCA6Q8N139 1617 aa10.8□□□□□ -0.68
LINC00299-204ENST00000454043 RNF17Q9BXT8 1623 aaKnown RBP10.8□□□□□ -0.68
LINC00299-204ENST00000454043 LMTK2Q8IWU2 1503 aa10.79□□□□□ -0.68
LINC00299-204ENST00000454043 VWDEQ8N2E2 1590 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms