RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 MVPQ14764 893 aaKnown RBP25.94■■□□□ 1.74
PDCD2-204ENST00000453163 THUMPD2Q9BTF0 503 aaKnown RBP25.94■■□□□ 1.74
PDCD2-204ENST00000453163 DIP2AQ14689 1571 aa25.94■■□□□ 1.74
PDCD2-204ENST00000453163 AAMPQ13685 434 aa25.93■■□□□ 1.74
PDCD2-204ENST00000453163 DZIP1LQ8IYY4 767 aaKnown RBP25.93■■□□□ 1.74
PDCD2-204ENST00000453163 NALCNQ8IZF0 1738 aa25.93■■□□□ 1.74
PDCD2-204ENST00000453163 C8orf34Q49A92 452 aa25.92■■□□□ 1.74
PDCD2-204ENST00000453163 ZBTB47Q9UFB7 747 aaPredicted RBP25.92■■□□□ 1.74
PDCD2-204ENST00000453163 LAS1LQ9Y4W2 734 aaKnown RBP25.92■■□□□ 1.74
PDCD2-204ENST00000453163 TRIM27P14373 513 aa25.92■■□□□ 1.74
PDCD2-204ENST00000453163 FAM161AQ3B820 660 aa25.92■■□□□ 1.74
PDCD2-204ENST00000453163 XRN1Q8IZH2 1706 aaKnown RBP25.91■■□□□ 1.74
PDCD2-204ENST00000453163 PMFBP1Q8TBY8 1022 aa25.9■■□□□ 1.74
PDCD2-204ENST00000453163 NOB1Q9ULX3 412 aaKnown RBP25.89■■□□□ 1.74
PDCD2-204ENST00000453163 PEAK1Q9H792 1746 aa25.89■■□□□ 1.74
PDCD2-204ENST00000453163 SSH2Q76I76 1423 aa25.88■■□□□ 1.73
PDCD2-204ENST00000453163 CEP170BQ9Y4F5 1589 aaPredicted RBP25.88■■□□□ 1.73
PDCD2-204ENST00000453163 ATF7IPQ6VMQ6 1270 aa25.88■■□□□ 1.73
PDCD2-204ENST00000453163 EIF4A2Q14240 407 aaKnown RBP25.87■■□□□ 1.73
PDCD2-204ENST00000453163 VIRMAQ69YN4 1812 aaKnown RBP25.86■■□□□ 1.73
PDCD2-204ENST00000453163 RIMS1Q86UR5 1692 aaKnown RBP25.85■■□□□ 1.73
PDCD2-204ENST00000453163 AEBP1Q8IUX7 1158 aa25.85■■□□□ 1.73
PDCD2-204ENST00000453163 SOX12O15370 315 aa25.84■■□□□ 1.73
PDCD2-204ENST00000453163 KIF16BQ96L93 1317 aa25.84■■□□□ 1.73
PDCD2-204ENST00000453163 CALD1Q05682 793 aaKnown RBP25.84■■□□□ 1.73
PDCD2-204ENST00000453163 USP31Q70CQ4 1352 aa25.84■■□□□ 1.73
PDCD2-204ENST00000453163 ITPRIPQ8IWB1 547 aa25.83■■□□□ 1.73
PDCD2-204ENST00000453163 ALDH1L2Q3SY69 923 aa25.83■■□□□ 1.73
PDCD2-204ENST00000453163 FAM83GA6ND36 823 aa25.82■■□□□ 1.72
PDCD2-204ENST00000453163 IFT57Q9NWB7 429 aa25.82■■□□□ 1.72
PDCD2-204ENST00000453163 KCNA6P17658 529 aa25.82■■□□□ 1.72
PDCD2-204ENST00000453163 GNAI1P63096 354 aa25.81■■□□□ 1.72
PDCD2-204ENST00000453163 SULT6B1Q6IMI4 303 aa25.81■■□□□ 1.72
PDCD2-204ENST00000453163 HSP90AB2PQ58FF8 381 aa25.81■■□□□ 1.72
PDCD2-204ENST00000453163 MBIPQ9NS73 344 aa25.81■■□□□ 1.72
PDCD2-204ENST00000453163 RGPD1P0DJD0 1748 aa25.81■■□□□ 1.72
PDCD2-204ENST00000453163 ZNF853P0CG23 659 aa25.81■■□□□ 1.72
PDCD2-204ENST00000453163 TMEM57Q8N5G2 664 aa25.81■■□□□ 1.72
PDCD2-204ENST00000453163 NGDNQ8NEJ9 315 aaKnown RBP25.81■■□□□ 1.72
PDCD2-204ENST00000453163 RWDD1Q9H446 243 aaPredicted RBP25.81■■□□□ 1.72
PDCD2-204ENST00000453163 LMOD3Q0VAK6 560 aa25.8■■□□□ 1.72
PDCD2-204ENST00000453163 DDX19BQ9UMR2 479 aa25.8■■□□□ 1.72
PDCD2-204ENST00000453163 TTC21AQ8NDW8 1320 aa25.8■■□□□ 1.72
PDCD2-204ENST00000453163 FMN2Q9NZ56 1722 aa25.8■■□□□ 1.72
PDCD2-204ENST00000453163 TSPYL6Q8N831 410 aa25.8■■□□□ 1.72
PDCD2-204ENST00000453163 DCTN1Q14203 1278 aa25.79■■□□□ 1.72
PDCD2-204ENST00000453163 RTL5Q5HYW3 569 aaPredicted RBP25.79■■□□□ 1.72
PDCD2-204ENST00000453163 PIK3C2AO00443 1686 aa25.79■■□□□ 1.72
PDCD2-204ENST00000453163 IPO8O15397 1037 aaKnown RBP25.78■■□□□ 1.72
PDCD2-204ENST00000453163 VAMP4O75379 141 aa25.78■■□□□ 1.72
PDCD2-204ENST00000453163 PDZRN3Q9UPQ7 1066 aa25.78■■□□□ 1.72
PDCD2-204ENST00000453163 ZNF428Q96B54 188 aa25.77■■□□□ 1.72
PDCD2-204ENST00000453163 ELL2O00472 640 aaPredicted RBP25.76■■□□□ 1.71
PDCD2-204ENST00000453163 CFAP44Q96MT7 982 aa25.76■■□□□ 1.71
PDCD2-204ENST00000453163 MAP3K19Q56UN5 1328 aa25.76■■□□□ 1.71
PDCD2-204ENST00000453163 PIK3R4Q99570 1358 aa25.74■■□□□ 1.71
PDCD2-204ENST00000453163 BRPF1P55201 1214 aaPredicted RBP25.74■■□□□ 1.71
PDCD2-204ENST00000453163 ANKARQ7Z5J8 1434 aa25.73■■□□□ 1.71
PDCD2-204ENST00000453163 MRPL50Q8N5N7 158 aaKnown RBP25.72■■□□□ 1.71
PDCD2-204ENST00000453163 DDRGK1Q96HY6 314 aa25.72■■□□□ 1.71
PDCD2-204ENST00000453163 TWISTNBQ3B726 338 aaPredicted RBP25.71■■□□□ 1.71
PDCD2-204ENST00000453163 C8orf58Q8NAV2 365 aa25.71■■□□□ 1.71
PDCD2-204ENST00000453163 ZBTB40Q9NUA8 1239 aa25.71■■□□□ 1.71
PDCD2-204ENST00000453163 ZNF142P52746 1687 aaPredicted RBP25.71■■□□□ 1.71
PDCD2-204ENST00000453163 CHD2O14647 1828 aaKnown RBP25.71■■□□□ 1.71
PDCD2-204ENST00000453163 SBNO1A3KN83 1393 aa25.7■■□□□ 1.7
PDCD2-204ENST00000453163 FLT4P35916 1363 aa25.7■■□□□ 1.7
PDCD2-204ENST00000453163 MARF1Q9Y4F3 1742 aaKnown RBP25.7■■□□□ 1.7
PDCD2-204ENST00000453163 HDAC1Q13547 482 aaPredicted RBP25.7■■□□□ 1.7
PDCD2-204ENST00000453163 ARHGEF10O15013 1369 aa25.68■■□□□ 1.7
PDCD2-204ENST00000453163 MCM10Q7L590 875 aa25.67■■□□□ 1.7
PDCD2-204ENST00000453163 NLRP6P59044 892 aa25.66■■□□□ 1.7
PDCD2-204ENST00000453163 ANKLE2Q86XL3 938 aa25.66■■□□□ 1.7
PDCD2-204ENST00000453163 NUTM2GQ5VZR2 741 aa25.65■■□□□ 1.7
PDCD2-204ENST00000453163 SEC24BO95487 1268 aa25.65■■□□□ 1.7
PDCD2-204ENST00000453163 ARHGAP45Q92619 1136 aa25.65■■□□□ 1.7
PDCD2-204ENST00000453163 AMPHP49418 695 aa25.64■■□□□ 1.7
PDCD2-204ENST00000453163 RBM33Q96EV2 1170 aaKnown RBP25.64■■□□□ 1.7
PDCD2-204ENST00000453163 ADAMTSL3P82987 1691 aa25.64■■□□□ 1.7
PDCD2-204ENST00000453163 USP19O94966 1318 aa25.62■■□□□ 1.69
PDCD2-204ENST00000453163 KRT24Q2M2I5 525 aa25.62■■□□□ 1.69
PDCD2-204ENST00000453163 USP54Q70EL1 1684 aa25.61■■□□□ 1.69
PDCD2-204ENST00000453163 KDRP35968 1356 aa25.61■■□□□ 1.69
PDCD2-204ENST00000453163 ABCC4O15439 1325 aa25.61■■□□□ 1.69
PDCD2-204ENST00000453163 SLC4A3P48751 1232 aa25.61■■□□□ 1.69
PDCD2-204ENST00000453163 SMC5Q8IY18 1101 aa25.61■■□□□ 1.69
PDCD2-204ENST00000453163 FOXO3O43524 673 aa25.6■■□□□ 1.69
PDCD2-204ENST00000453163 USP35Q9P2H5 1018 aa25.6■■□□□ 1.69
PDCD2-204ENST00000453163 CHL1O00533 1208 aa25.6■■□□□ 1.69
PDCD2-204ENST00000453163 EYA1Q99502 592 aa25.6■■□□□ 1.69
PDCD2-204ENST00000453163 SETD1BQ9UPS6 1966 aaKnown RBP25.6■■□□□ 1.69
PDCD2-204ENST00000453163 IGSF1Q8N6C5 1336 aa25.6■■□□□ 1.69
PDCD2-204ENST00000453163 ZBTB7BO15156 539 aaPredicted RBP25.6■■□□□ 1.69
PDCD2-204ENST00000453163 MTHFSDQ2M296 383 aaKnown RBP25.59■■□□□ 1.69
PDCD2-204ENST00000453163 ABTB2Q8N961 1025 aa25.59■■□□□ 1.69
PDCD2-204ENST00000453163 CRB1P82279 1406 aa25.58■■□□□ 1.69
PDCD2-204ENST00000453163 C1orf115Q9H7X2 142 aa25.57■■□□□ 1.68
PDCD2-204ENST00000453163 PHF8Q9UPP1 1060 aa25.56■■□□□ 1.68
PDCD2-204ENST00000453163 HOXC9P31274 260 aa25.56■■□□□ 1.68
PDCD2-204ENST00000453163 C14orf37Q86TY3 774 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms