RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 LMTK2Q8IWU2 1503 aa13.86□□□□□ -0.19
DDR1-239ENST00000452441 SBNO2Q9Y2G9 1366 aa13.86□□□□□ -0.19
DDR1-239ENST00000452441 PPLO60437 1756 aa13.86□□□□□ -0.19
DDR1-239ENST00000452441 TBC1D32Q96NH3 1257 aa13.86□□□□□ -0.19
DDR1-239ENST00000452441 HSP90AB2PQ58FF8 381 aa13.85□□□□□ -0.19
DDR1-239ENST00000452441 C16orf71Q8IYS4 520 aaPredicted RBP13.85□□□□□ -0.19
DDR1-239ENST00000452441 POLKQ9UBT6 870 aa13.85□□□□□ -0.19
DDR1-239ENST00000452441 MAP4K4O95819 1239 aaPredicted RBP13.85□□□□□ -0.19
DDR1-239ENST00000452441 ANKRD36BQ8N2N9 1353 aa13.85□□□□□ -0.19
DDR1-239ENST00000452441 ZC3H13Q5T200 1668 aaKnown RBP13.84□□□□□ -0.19
DDR1-239ENST00000452441 FKBP5Q13451 457 aaPredicted RBP13.84□□□□□ -0.19
DDR1-239ENST00000452441 ABCC3O15438 1527 aa13.84□□□□□ -0.19
DDR1-239ENST00000452441 TULP4Q9NRJ4 1543 aa13.84□□□□□ -0.19
DDR1-239ENST00000452441 FCHSD2O94868 740 aa13.84□□□□□ -0.19
DDR1-239ENST00000452441 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
DDR1-239ENST00000452441 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
DDR1-239ENST00000452441 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
DDR1-239ENST00000452441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.83□□□□□ -0.2
DDR1-239ENST00000452441 FOXO3O43524 673 aa13.83□□□□□ -0.2
DDR1-239ENST00000452441 TRAK2O60296 914 aa13.83□□□□□ -0.2
DDR1-239ENST00000452441 NFE2L2Q16236 605 aa13.83□□□□□ -0.2
DDR1-239ENST00000452441 IQSEC2Q5JU85 1478 aa13.83□□□□□ -0.2
DDR1-239ENST00000452441 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.2
DDR1-239ENST00000452441 AIMP1Q12904 312 aaKnown RBP13.83□□□□□ -0.2
DDR1-239ENST00000452441 CHD1LQ86WJ1 897 aa13.83□□□□□ -0.2
DDR1-239ENST00000452441 CHMP4BQ9H444 224 aaKnown RBP13.83□□□□□ -0.2
DDR1-239ENST00000452441 DDX49Q9Y6V7 483 aaKnown RBP13.83□□□□□ -0.2
DDR1-239ENST00000452441 ZC3H6P61129 1189 aaKnown RBP13.82□□□□□ -0.2
DDR1-239ENST00000452441 ACEP12821 1306 aa13.82□□□□□ -0.2
DDR1-239ENST00000452441 GLI2P10070 1586 aa13.82□□□□□ -0.2
DDR1-239ENST00000452441 C8orf58Q8NAV2 365 aa13.82□□□□□ -0.2
DDR1-239ENST00000452441 LARP6Q9BRS8 491 aaKnown RBP13.81□□□□□ -0.2
DDR1-239ENST00000452441 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
DDR1-239ENST00000452441 EXOC6BQ9Y2D4 811 aa13.81□□□□□ -0.2
DDR1-239ENST00000452441 CHMP3Q9Y3E7 222 aa13.81□□□□□ -0.2
DDR1-239ENST00000452441 PANK2Q9BZ23 570 aa13.81□□□□□ -0.2
DDR1-239ENST00000452441 HECW2Q9P2P5 1572 aa13.81□□□□□ -0.2
DDR1-239ENST00000452441 AAMPQ13685 434 aa13.81□□□□□ -0.2
DDR1-239ENST00000452441 L1TD1Q5T7N2 865 aaKnown RBP13.81□□□□□ -0.2
DDR1-239ENST00000452441 CHMP5Q9NZZ3 219 aa13.81□□□□□ -0.2
DDR1-239ENST00000452441 THEMISQ8N1K5 641 aaPredicted RBP13.8□□□□□ -0.2
DDR1-239ENST00000452441 RIMS2Q9UQ26 1411 aa13.8□□□□□ -0.2
DDR1-239ENST00000452441 TSPOAP1O95153 1857 aa13.8□□□□□ -0.2
DDR1-239ENST00000452441 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
DDR1-239ENST00000452441 KCNJ4P48050 445 aa13.8□□□□□ -0.2
DDR1-239ENST00000452441 MCTP1Q6DN14 999 aa13.8□□□□□ -0.2
DDR1-239ENST00000452441 YTHDC2Q9H6S0 1430 aaKnown RBP13.8□□□□□ -0.2
DDR1-239ENST00000452441 TEFQ10587 303 aa13.8□□□□□ -0.2
DDR1-239ENST00000452441 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
DDR1-239ENST00000452441 ANTXR1Q9H6X2 564 aa13.79□□□□□ -0.2
DDR1-239ENST00000452441 MBIPQ9NS73 344 aa13.79□□□□□ -0.2
DDR1-239ENST00000452441 NLRP2Q9NX02 1062 aa13.79□□□□□ -0.2
DDR1-239ENST00000452441 NAP1L2Q9ULW6 460 aaPredicted RBP13.79□□□□□ -0.2
DDR1-239ENST00000452441 TRIM35Q9UPQ4 493 aa13.79□□□□□ -0.2
DDR1-239ENST00000452441 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
DDR1-239ENST00000452441 PTMAP06454 111 aaKnown RBP13.79□□□□□ -0.2
DDR1-239ENST00000452441 FAM43AQ8N2R8 423 aa13.79□□□□□ -0.2
DDR1-239ENST00000452441 DDX54Q8TDD1 881 aaKnown RBP13.79□□□□□ -0.2
DDR1-239ENST00000452441 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
DDR1-239ENST00000452441 ANO2Q9NQ90 1003 aa13.79□□□□□ -0.2
DDR1-239ENST00000452441 ZMYM3Q14202 1370 aa13.78□□□□□ -0.2
DDR1-239ENST00000452441 GBP4Q96PP9 640 aa13.78□□□□□ -0.2
DDR1-239ENST00000452441 NEXMIFQ5QGS0 1516 aa13.78□□□□□ -0.2
DDR1-239ENST00000452441 API5Q9BZZ5 524 aaKnown RBP13.78□□□□□ -0.2
DDR1-239ENST00000452441 ARHGEF28Q8N1W1 1705 aaKnown RBP13.77□□□□□ -0.2
DDR1-239ENST00000452441 CCDC27Q2M243 656 aa13.77□□□□□ -0.2
DDR1-239ENST00000452441 ANXA1P04083 346 aa13.77□□□□□ -0.21
DDR1-239ENST00000452441 MCM4P33991 863 aa13.77□□□□□ -0.21
DDR1-239ENST00000452441 RNF214Q8ND24 703 aa13.77□□□□□ -0.21
DDR1-239ENST00000452441 PROSER2Q86WR7 435 aaPredicted RBP13.77□□□□□ -0.21
DDR1-239ENST00000452441 PPIP5K1Q6PFW1 1433 aa13.77□□□□□ -0.21
DDR1-239ENST00000452441 NLRP1Q9C000 1473 aa13.77□□□□□ -0.21
DDR1-239ENST00000452441 OTUD7AQ8TE49 926 aaPredicted RBP13.76□□□□□ -0.21
DDR1-239ENST00000452441 TNRQ92752 1358 aa13.75□□□□□ -0.21
DDR1-239ENST00000452441 LTKP29376 864 aa13.75□□□□□ -0.21
DDR1-239ENST00000452441 DNTTIP2Q5QJE6 756 aaKnown RBP13.75□□□□□ -0.21
DDR1-239ENST00000452441 BCL11BQ9C0K0 894 aaPredicted RBP13.75□□□□□ -0.21
DDR1-239ENST00000452441 VIRMAQ69YN4 1812 aaKnown RBP13.75□□□□□ -0.21
DDR1-239ENST00000452441 MYO5BQ9ULV0 1848 aa13.74□□□□□ -0.21
DDR1-239ENST00000452441 CHAMP1Q96JM3 812 aa13.74□□□□□ -0.21
DDR1-239ENST00000452441 DIP2CQ9Y2E4 1556 aa13.74□□□□□ -0.21
DDR1-239ENST00000452441 PIK3C2BO00750 1634 aa13.73□□□□□ -0.21
DDR1-239ENST00000452441 SYTL4Q96C24 671 aaPredicted RBP13.73□□□□□ -0.21
DDR1-239ENST00000452441 PLEKHF1Q96S99 279 aa13.73□□□□□ -0.21
DDR1-239ENST00000452441 NEK4P51957 841 aa13.73□□□□□ -0.21
DDR1-239ENST00000452441 EIF4A2Q14240 407 aaKnown RBP13.73□□□□□ -0.21
DDR1-239ENST00000452441 CAVIN1Q6NZI2 390 aaKnown RBP13.73□□□□□ -0.21
DDR1-239ENST00000452441 TBC1D9Q6ZT07 1266 aa13.73□□□□□ -0.21
DDR1-239ENST00000452441 UPF3BQ9BZI7 483 aaKnown RBP13.73□□□□□ -0.21
DDR1-239ENST00000452441 RRAGDQ9NQL2 400 aaPredicted RBP13.73□□□□□ -0.21
DDR1-239ENST00000452441 HMMRO75330 724 aa13.72□□□□□ -0.21
DDR1-239ENST00000452441 XRCC6P12956 609 aaKnown RBP eCLIP13.72□□□□□ -0.21
DDR1-239ENST00000452441 SSFA2P28290 1259 aa13.72□□□□□ -0.21
DDR1-239ENST00000452441 MEIS3Q99687 375 aa13.72□□□□□ -0.21
DDR1-239ENST00000452441 KAT6BQ8WYB5 2073 aa13.72□□□□□ -0.21
DDR1-239ENST00000452441 TTC21BQ7Z4L5 1316 aa13.72□□□□□ -0.21
DDR1-239ENST00000452441 C1orf141Q5JVX7 400 aa13.72□□□□□ -0.21
DDR1-239ENST00000452441 METP08581 1390 aa13.71□□□□□ -0.21
DDR1-239ENST00000452441 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
DDR1-239ENST00000452441 PRPF40AO75400 957 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms