RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 IL16Q14005 1332 aa15.42■□□□□ 0.06
COL27A1-202ENST00000451716 CDC42BPGQ6DT37 1551 aa15.42■□□□□ 0.06
COL27A1-202ENST00000451716 SLC4A3P48751 1232 aa15.42■□□□□ 0.06
COL27A1-202ENST00000451716 ELL2O00472 640 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-202ENST00000451716 NFE2L2Q16236 605 aa15.41■□□□□ 0.06
COL27A1-202ENST00000451716 ITPRIPQ8IWB1 547 aa15.41■□□□□ 0.06
COL27A1-202ENST00000451716 EID1Q9Y6B2 187 aa15.41■□□□□ 0.06
COL27A1-202ENST00000451716 CT47B1P0C2W7 299 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-202ENST00000451716 ZNF692Q9BU19 519 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-202ENST00000451716 PTPRUQ92729 1446 aa15.4■□□□□ 0.06
COL27A1-202ENST00000451716 PMFBP1Q8TBY8 1022 aa15.4■□□□□ 0.06
COL27A1-202ENST00000451716 AMOTL2Q9Y2J4 779 aa15.4■□□□□ 0.06
COL27A1-202ENST00000451716 PLEKHG1Q9ULL1 1385 aa15.4■□□□□ 0.06
COL27A1-202ENST00000451716 FAM83GA6ND36 823 aa15.4■□□□□ 0.06
COL27A1-202ENST00000451716 ATF7IPQ6VMQ6 1270 aa15.4■□□□□ 0.06
COL27A1-202ENST00000451716 KNDC1Q76NI1 1749 aa15.39■□□□□ 0.05
COL27A1-202ENST00000451716 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.39■□□□□ 0.05
COL27A1-202ENST00000451716 TTC21BQ7Z4L5 1316 aa15.39■□□□□ 0.05
COL27A1-202ENST00000451716 DCTN1Q14203 1278 aa15.39■□□□□ 0.05
COL27A1-202ENST00000451716 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
COL27A1-202ENST00000451716 AEBP1Q8IUX7 1158 aa15.38■□□□□ 0.05
COL27A1-202ENST00000451716 TSPYL6Q8N831 410 aa15.38■□□□□ 0.05
COL27A1-202ENST00000451716 PDZRN3Q9UPQ7 1066 aa15.38■□□□□ 0.05
COL27A1-202ENST00000451716 AATKQ6ZMQ8 1374 aa15.38■□□□□ 0.05
COL27A1-202ENST00000451716 TMEM57Q8N5G2 664 aa15.38■□□□□ 0.05
COL27A1-202ENST00000451716 CDK12Q9NYV4 1490 aaPredicted RBP15.37■□□□□ 0.05
COL27A1-202ENST00000451716 MON2Q7Z3U7 1717 aa15.37■□□□□ 0.05
COL27A1-202ENST00000451716 SEC24BO95487 1268 aa15.37■□□□□ 0.05
COL27A1-202ENST00000451716 RWDD1Q9H446 243 aaPredicted RBP15.37■□□□□ 0.05
COL27A1-202ENST00000451716 EIF4A2Q14240 407 aaKnown RBP15.35■□□□□ 0.05
COL27A1-202ENST00000451716 HSP90AB2PQ58FF8 381 aa15.35■□□□□ 0.05
COL27A1-202ENST00000451716 SULT6B1Q6IMI4 303 aa15.35■□□□□ 0.05
COL27A1-202ENST00000451716 MBIPQ9NS73 344 aa15.35■□□□□ 0.05
COL27A1-202ENST00000451716 ITSN1Q15811 1721 aa15.35■□□□□ 0.05
COL27A1-202ENST00000451716 C3P01024 1663 aa15.35■□□□□ 0.05
COL27A1-202ENST00000451716 RTL5Q5HYW3 569 aaPredicted RBP15.34■□□□□ 0.05
COL27A1-202ENST00000451716 AKAP12Q02952 1782 aa15.34■□□□□ 0.05
COL27A1-202ENST00000451716 PLEKHG3A1L390 1219 aa15.34■□□□□ 0.05
COL27A1-202ENST00000451716 DDX19BQ9UMR2 479 aa15.34■□□□□ 0.05
COL27A1-202ENST00000451716 VAMP4O75379 141 aa15.33■□□□□ 0.04
COL27A1-202ENST00000451716 DDRGK1Q96HY6 314 aa15.33■□□□□ 0.04
COL27A1-202ENST00000451716 KIF16BQ96L93 1317 aa15.32■□□□□ 0.04
COL27A1-202ENST00000451716 USP6P35125 1406 aa15.32■□□□□ 0.04
COL27A1-202ENST00000451716 GNAI1P63096 354 aa15.32■□□□□ 0.04
COL27A1-202ENST00000451716 THEMISQ8N1K5 641 aaPredicted RBP15.32■□□□□ 0.04
COL27A1-202ENST00000451716 IPO8O15397 1037 aaKnown RBP15.32■□□□□ 0.04
COL27A1-202ENST00000451716 C8orf58Q8NAV2 365 aa15.32■□□□□ 0.04
COL27A1-202ENST00000451716 NGDNQ8NEJ9 315 aaKnown RBP15.32■□□□□ 0.04
COL27A1-202ENST00000451716 TBX22Q9Y458 520 aa15.32■□□□□ 0.04
COL27A1-202ENST00000451716 ALDH1L2Q3SY69 923 aa15.31■□□□□ 0.04
COL27A1-202ENST00000451716 IFT57Q9NWB7 429 aa15.31■□□□□ 0.04
COL27A1-202ENST00000451716 TAF7LQ5H9L4 462 aa15.31■□□□□ 0.04
COL27A1-202ENST00000451716 ZNF853P0CG23 659 aa15.3■□□□□ 0.04
COL27A1-202ENST00000451716 RBM33Q96EV2 1170 aaKnown RBP15.3■□□□□ 0.04
COL27A1-202ENST00000451716 ZBTB40Q9NUA8 1239 aa15.3■□□□□ 0.04
COL27A1-202ENST00000451716 CALD1Q05682 793 aaKnown RBP15.3■□□□□ 0.04
COL27A1-202ENST00000451716 NUTM2GQ5VZR2 741 aa15.3■□□□□ 0.04
COL27A1-202ENST00000451716 OVOS2A0A0J9YW53 1432 aa15.3■□□□□ 0.04
COL27A1-202ENST00000451716 OVOS2Q6IE36 1432 aa15.3■□□□□ 0.04
COL27A1-202ENST00000451716 KCNA6P17658 529 aa15.3■□□□□ 0.04
COL27A1-202ENST00000451716 KRT24Q2M2I5 525 aa15.3■□□□□ 0.04
COL27A1-202ENST00000451716 TWISTNBQ3B726 338 aaPredicted RBP15.3■□□□□ 0.04
COL27A1-202ENST00000451716 MCM10Q7L590 875 aa15.3■□□□□ 0.04
COL27A1-202ENST00000451716 USP19O94966 1318 aa15.29■□□□□ 0.04
COL27A1-202ENST00000451716 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
COL27A1-202ENST00000451716 CFAP44Q96MT7 982 aa15.29■□□□□ 0.04
COL27A1-202ENST00000451716 C1orf115Q9H7X2 142 aa15.29■□□□□ 0.04
COL27A1-202ENST00000451716 DLG5Q8TDM6 1919 aa15.29■□□□□ 0.04
COL27A1-202ENST00000451716 ARHGAP23Q9P227 1491 aa15.28■□□□□ 0.04
COL27A1-202ENST00000451716 FER1L4A9Z1Z3 1794 aa15.28■□□□□ 0.04
COL27A1-202ENST00000451716 ARXQ96QS3 562 aa15.28■□□□□ 0.04
COL27A1-202ENST00000451716 MAP3K19Q56UN5 1328 aa15.28■□□□□ 0.04
COL27A1-202ENST00000451716 SLIT1O75093 1534 aa15.28■□□□□ 0.04
COL27A1-202ENST00000451716 LMOD3Q0VAK6 560 aa15.27■□□□□ 0.04
COL27A1-202ENST00000451716 HDAC1Q13547 482 aaPredicted RBP15.27■□□□□ 0.03
COL27A1-202ENST00000451716 TOPAZ1Q8N9V7 1692 aa15.27■□□□□ 0.03
COL27A1-202ENST00000451716 NRKQ7Z2Y5 1582 aa15.26■□□□□ 0.03
COL27A1-202ENST00000451716 FOXO3O43524 673 aa15.26■□□□□ 0.03
COL27A1-202ENST00000451716 RGPD8O14715 1765 aaPredicted RBP15.26■□□□□ 0.03
COL27A1-202ENST00000451716 SSH2Q76I76 1423 aa15.25■□□□□ 0.03
COL27A1-202ENST00000451716 PEAK1Q9H792 1746 aa15.25■□□□□ 0.03
COL27A1-202ENST00000451716 MIS18AQ9NYP9 233 aa15.25■□□□□ 0.03
COL27A1-202ENST00000451716 ZNF428Q96B54 188 aa15.25■□□□□ 0.03
COL27A1-202ENST00000451716 NLRP6P59044 892 aa15.24■□□□□ 0.03
COL27A1-202ENST00000451716 ZBTB7BO15156 539 aaPredicted RBP15.24■□□□□ 0.03
COL27A1-202ENST00000451716 DIP2AQ14689 1571 aa15.24■□□□□ 0.03
COL27A1-202ENST00000451716 USP31Q70CQ4 1352 aa15.24■□□□□ 0.03
COL27A1-202ENST00000451716 AMPHP49418 695 aa15.23■□□□□ 0.03
COL27A1-202ENST00000451716 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
COL27A1-202ENST00000451716 PTCH1Q13635 1447 aa15.23■□□□□ 0.03
COL27A1-202ENST00000451716 SMC5Q8IY18 1101 aa15.23■□□□□ 0.03
COL27A1-202ENST00000451716 LNPKQ9C0E8 428 aa15.23■□□□□ 0.03
COL27A1-202ENST00000451716 TTC21AQ8NDW8 1320 aa15.22■□□□□ 0.03
COL27A1-202ENST00000451716 C14orf37Q86TY3 774 aa15.22■□□□□ 0.03
COL27A1-202ENST00000451716 MTHFSDQ2M296 383 aaKnown RBP15.21■□□□□ 0.03
COL27A1-202ENST00000451716 VIRMAQ69YN4 1812 aaKnown RBP15.21■□□□□ 0.03
COL27A1-202ENST00000451716 ARHGAP45Q92619 1136 aa15.21■□□□□ 0.02
COL27A1-202ENST00000451716 EYA1Q99502 592 aa15.21■□□□□ 0.02
COL27A1-202ENST00000451716 LTV1Q96GA3 475 aaPredicted RBP15.2■□□□□ 0.02
COL27A1-202ENST00000451716 CHL1O00533 1208 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms