RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 RRS1Q15050 365 aaKnown RBP9.37□□□□□ -0.91
LSM8-204ENST00000424702 C8orf37Q96NL8 207 aa9.37□□□□□ -0.91
LSM8-204ENST00000424702 MYH16Q9H6N6 1097 aa9.37□□□□□ -0.91
LSM8-204ENST00000424702 ANKRD24Q8TF21 1146 aa9.36□□□□□ -0.91
LSM8-204ENST00000424702 IP6K1Q92551 441 aa9.36□□□□□ -0.91
LSM8-204ENST00000424702 CHD2O14647 1828 aaKnown RBP9.36□□□□□ -0.91
LSM8-204ENST00000424702 NRXN3Q9Y4C0 1643 aa9.36□□□□□ -0.91
LSM8-204ENST00000424702 SF3B2Q13435 895 aaKnown RBP9.36□□□□□ -0.91
LSM8-204ENST00000424702 ZNF772Q68DY9 489 aaPredicted RBP9.36□□□□□ -0.91
LSM8-204ENST00000424702 RRP7AQ9Y3A4 280 aaKnown RBP9.36□□□□□ -0.91
LSM8-204ENST00000424702 CCDC136Q96JN2 1154 aa9.35□□□□□ -0.91
LSM8-204ENST00000424702 USP31Q70CQ4 1352 aa9.35□□□□□ -0.91
LSM8-204ENST00000424702 FCHSD2O94868 740 aa9.35□□□□□ -0.91
LSM8-204ENST00000424702 AATKQ6ZMQ8 1374 aa9.35□□□□□ -0.91
LSM8-204ENST00000424702 SOS2Q07890 1332 aaPredicted RBP9.35□□□□□ -0.91
LSM8-204ENST00000424702 ERICH6BQ5W0A0 696 aa9.34□□□□□ -0.91
LSM8-204ENST00000424702 E9PSI1 815 aa9.34□□□□□ -0.91
LSM8-204ENST00000424702 LAS1LQ9Y4W2 734 aaKnown RBP9.34□□□□□ -0.91
LSM8-204ENST00000424702 SULT6B1Q6IMI4 303 aa9.34□□□□□ -0.92
LSM8-204ENST00000424702 ZNF530Q6P9A1 599 aaPredicted RBP9.34□□□□□ -0.92
LSM8-204ENST00000424702 TTC5Q8N0Z6 440 aa9.34□□□□□ -0.92
LSM8-204ENST00000424702 PPP4R2Q9NY27 417 aa9.34□□□□□ -0.92
LSM8-204ENST00000424702 EMILIN1Q9Y6C2 1016 aa9.34□□□□□ -0.92
LSM8-204ENST00000424702 CHRNA2Q15822 529 aa9.33□□□□□ -0.92
LSM8-204ENST00000424702 TCP11L2Q8N4U5 519 aa9.33□□□□□ -0.92
LSM8-204ENST00000424702 USP35Q9P2H5 1018 aa9.33□□□□□ -0.92
LSM8-204ENST00000424702 CPSF1Q10570 1443 aaKnown RBP9.33□□□□□ -0.92
LSM8-204ENST00000424702 CABLES1Q8TDN4 633 aa9.33□□□□□ -0.92
LSM8-204ENST00000424702 TRPC5Q9UL62 973 aaPredicted RBP9.33□□□□□ -0.92
LSM8-204ENST00000424702 MAP3K19Q56UN5 1328 aa9.33□□□□□ -0.92
LSM8-204ENST00000424702 EXOC5O00471 708 aa9.33□□□□□ -0.92
LSM8-204ENST00000424702 MS4A1P11836 297 aa9.33□□□□□ -0.92
LSM8-204ENST00000424702 HOXC9P31274 260 aa9.32□□□□□ -0.92
LSM8-204ENST00000424702 PRKAR2BP31323 418 aa9.32□□□□□ -0.92
LSM8-204ENST00000424702 USP21Q9UK80 565 aa9.32□□□□□ -0.92
LSM8-204ENST00000424702 FMN2Q9NZ56 1722 aa9.32□□□□□ -0.92
LSM8-204ENST00000424702 DDX17Q92841 729 aaKnown RBP9.32□□□□□ -0.92
LSM8-204ENST00000424702 HMOX1P09601 288 aa9.31□□□□□ -0.92
LSM8-204ENST00000424702 BTG4Q9NY30 223 aa9.31□□□□□ -0.92
LSM8-204ENST00000424702 HSPA1LP34931 641 aa9.31□□□□□ -0.92
LSM8-204ENST00000424702 CDCA7LQ96GN5 454 aa9.31□□□□□ -0.92
LSM8-204ENST00000424702 ZBTB47Q9UFB7 747 aaPredicted RBP9.31□□□□□ -0.92
LSM8-204ENST00000424702 BLMP54132 1417 aaPredicted RBP9.31□□□□□ -0.92
LSM8-204ENST00000424702 CHMP4BQ9H444 224 aaKnown RBP9.31□□□□□ -0.92
LSM8-204ENST00000424702 POLKQ9UBT6 870 aa9.31□□□□□ -0.92
LSM8-204ENST00000424702 INSRP06213 1382 aa9.31□□□□□ -0.92
LSM8-204ENST00000424702 IL2RBP14784 551 aa9.3□□□□□ -0.92
LSM8-204ENST00000424702 RIPK4P57078 832 aa9.3□□□□□ -0.92
LSM8-204ENST00000424702 GNAI1P63096 354 aa9.3□□□□□ -0.92
LSM8-204ENST00000424702 ARHGEF25Q86VW2 580 aa9.3□□□□□ -0.92
LSM8-204ENST00000424702 USP32Q8NFA0 1604 aa9.3□□□□□ -0.92
LSM8-204ENST00000424702 KIAA0232Q92628 1395 aa9.29□□□□□ -0.92
LSM8-204ENST00000424702 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.29□□□□□ -0.92
LSM8-204ENST00000424702 STK31Q9BXU1 1019 aa9.29□□□□□ -0.92
LSM8-204ENST00000424702 ZRANB1Q9UGI0 708 aa9.29□□□□□ -0.92
LSM8-204ENST00000424702 FRAT1Q92837 279 aaPredicted RBP9.29□□□□□ -0.92
LSM8-204ENST00000424702 USP19O94966 1318 aa9.28□□□□□ -0.92
LSM8-204ENST00000424702 DDB1Q16531 1140 aa9.28□□□□□ -0.92
LSM8-204ENST00000424702 IFNL2Q8IZJ0 200 aa9.28□□□□□ -0.92
LSM8-204ENST00000424702 NFE2L2Q16236 605 aa9.28□□□□□ -0.92
LSM8-204ENST00000424702 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
LSM8-204ENST00000424702 PNPLA6Q8IY17 1366 aa9.28□□□□□ -0.92
LSM8-204ENST00000424702 RRP1P56182 461 aaKnown RBP9.28□□□□□ -0.92
LSM8-204ENST00000424702 CABP4P57796 275 aa9.28□□□□□ -0.92
LSM8-204ENST00000424702 SYTL4Q96C24 671 aaPredicted RBP9.28□□□□□ -0.92
LSM8-204ENST00000424702 ZCRB1Q8TBF4 217 aaKnown RBP9.28□□□□□ -0.92
LSM8-204ENST00000424702 THRAP3Q9Y2W1 955 aaKnown RBP9.28□□□□□ -0.92
LSM8-204ENST00000424702 STRCQ7RTU9 1775 aa9.27□□□□□ -0.92
LSM8-204ENST00000424702 EIF4A2Q14240 407 aaKnown RBP9.27□□□□□ -0.93
LSM8-204ENST00000424702 HSP90AB2PQ58FF8 381 aa9.27□□□□□ -0.93
LSM8-204ENST00000424702 UNC5CLQ8IV45 518 aa9.27□□□□□ -0.93
LSM8-204ENST00000424702 DDX54Q8TDD1 881 aaKnown RBP9.27□□□□□ -0.93
LSM8-204ENST00000424702 FBLN1P23142 703 aa9.27□□□□□ -0.93
LSM8-204ENST00000424702 CARD10Q9BWT7 1032 aa9.27□□□□□ -0.93
LSM8-204ENST00000424702 WDR17Q8IZU2 1322 aa9.27□□□□□ -0.93
LSM8-204ENST00000424702 PCDH11XQ9BZA7 1347 aa9.27□□□□□ -0.93
LSM8-204ENST00000424702 PCDH11YQ9BZA8 1340 aa9.27□□□□□ -0.93
LSM8-204ENST00000424702 GNAT3A8MTJ3 354 aa9.27□□□□□ -0.93
LSM8-204ENST00000424702 ADRA2BP18089 450 aa9.27□□□□□ -0.93
LSM8-204ENST00000424702 WDR63Q8IWG1 891 aa9.27□□□□□ -0.93
LSM8-204ENST00000424702 SETD1AO15047 1707 aaKnown RBP9.26□□□□□ -0.93
LSM8-204ENST00000424702 NALCNQ8IZF0 1738 aa9.26□□□□□ -0.93
LSM8-204ENST00000424702 HTATSF1O43719 755 aaKnown RBP9.26□□□□□ -0.93
LSM8-204ENST00000424702 B4GALNT3Q6L9W6 998 aa9.26□□□□□ -0.93
LSM8-204ENST00000424702 FTSJ3Q8IY81 847 aaKnown RBP9.26□□□□□ -0.93
LSM8-204ENST00000424702 HDAC5Q9UQL6 1122 aa9.26□□□□□ -0.93
LSM8-204ENST00000424702 WWC1Q8IX03 1113 aa9.26□□□□□ -0.93
LSM8-204ENST00000424702 ARXQ96QS3 562 aa9.26□□□□□ -0.93
LSM8-204ENST00000424702 IPO8O15397 1037 aaKnown RBP9.26□□□□□ -0.93
LSM8-204ENST00000424702 OVOS2A0A0J9YW53 1432 aa9.25□□□□□ -0.93
LSM8-204ENST00000424702 OVOS2Q6IE36 1432 aa9.25□□□□□ -0.93
LSM8-204ENST00000424702 TMPOP42166 694 aaKnown RBP9.25□□□□□ -0.93
LSM8-204ENST00000424702 SMARCC1Q92922 1105 aaPredicted RBP9.25□□□□□ -0.93
LSM8-204ENST00000424702 CPDO75976 1380 aa9.25□□□□□ -0.93
LSM8-204ENST00000424702 SLFN5Q08AF3 891 aa9.25□□□□□ -0.93
LSM8-204ENST00000424702 TMOD3Q9NYL9 352 aa9.25□□□□□ -0.93
LSM8-204ENST00000424702 AFF2P51816 1311 aa9.25□□□□□ -0.93
LSM8-204ENST00000424702 TSPYL4Q9UJ04 414 aa9.25□□□□□ -0.93
LSM8-204ENST00000424702 NPHP1O15259 732 aa9.24□□□□□ -0.93
LSM8-204ENST00000424702 LTBP4Q8N2S1 1624 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms