RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 IL16Q14005 1332 aa17.44■□□□□ 0.38
SSR4P1-201ENST00000415143 NEUROD2Q15784 382 aa17.43■□□□□ 0.38
SSR4P1-201ENST00000415143 COG3Q96JB2 828 aa17.43■□□□□ 0.38
SSR4P1-201ENST00000415143 AATKQ6ZMQ8 1374 aa17.42■□□□□ 0.38
SSR4P1-201ENST00000415143 CDC42BPGQ6DT37 1551 aa17.42■□□□□ 0.38
SSR4P1-201ENST00000415143 ATRNO75882 1429 aa17.42■□□□□ 0.38
SSR4P1-201ENST00000415143 AMOTL2Q9Y2J4 779 aa17.42■□□□□ 0.38
SSR4P1-201ENST00000415143 CALD1Q05682 793 aaKnown RBP17.41■□□□□ 0.38
SSR4P1-201ENST00000415143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.41■□□□□ 0.38
SSR4P1-201ENST00000415143 COL3A1P02461 1466 aaPredicted RBP17.41■□□□□ 0.38
SSR4P1-201ENST00000415143 ADGRB2O60241 1585 aa17.4■□□□□ 0.38
SSR4P1-201ENST00000415143 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
SSR4P1-201ENST00000415143 TMPOP42166 694 aaKnown RBP17.39■□□□□ 0.37
SSR4P1-201ENST00000415143 DEFB132Q7Z7B7 95 aa17.39■□□□□ 0.37
SSR4P1-201ENST00000415143 PLEKHF1Q96S99 279 aa17.39■□□□□ 0.37
SSR4P1-201ENST00000415143 RRP7AQ9Y3A4 280 aaKnown RBP17.39■□□□□ 0.37
SSR4P1-201ENST00000415143 PLEKHG3A1L390 1219 aa17.38■□□□□ 0.37
SSR4P1-201ENST00000415143 FNBP4Q8N3X1 1017 aaPredicted RBP17.38■□□□□ 0.37
SSR4P1-201ENST00000415143 POLKQ9UBT6 870 aa17.37■□□□□ 0.37
SSR4P1-201ENST00000415143 ANP32AP39687 249 aaKnown RBP17.36■□□□□ 0.37
SSR4P1-201ENST00000415143 ERICH6Q7L0X2 663 aa17.36■□□□□ 0.37
SSR4P1-201ENST00000415143 ROBO2Q9HCK4 1378 aa17.36■□□□□ 0.37
SSR4P1-201ENST00000415143 RARSP54136 660 aaKnown RBP17.35■□□□□ 0.37
SSR4P1-201ENST00000415143 RIPK4P57078 832 aa17.35■□□□□ 0.37
SSR4P1-201ENST00000415143 LMOD3Q0VAK6 560 aa17.35■□□□□ 0.37
SSR4P1-201ENST00000415143 C20orf194Q5TEA3 1177 aa17.35■□□□□ 0.37
SSR4P1-201ENST00000415143 PTCH1Q13635 1447 aa17.35■□□□□ 0.37
SSR4P1-201ENST00000415143 PSDA5PKW4 1024 aaPredicted RBP17.34■□□□□ 0.37
SSR4P1-201ENST00000415143 BCAR3O75815 825 aa17.34■□□□□ 0.37
SSR4P1-201ENST00000415143 ITSN1Q15811 1721 aa17.34■□□□□ 0.37
SSR4P1-201ENST00000415143 PPM1GO15355 546 aaPredicted RBP17.33■□□□□ 0.36
SSR4P1-201ENST00000415143 SF3B2Q13435 895 aaKnown RBP17.33■□□□□ 0.36
SSR4P1-201ENST00000415143 ZNF428Q96B54 188 aa17.33■□□□□ 0.36
SSR4P1-201ENST00000415143 MON2Q7Z3U7 1717 aa17.33■□□□□ 0.36
SSR4P1-201ENST00000415143 TTC21AQ8NDW8 1320 aa17.32■□□□□ 0.36
SSR4P1-201ENST00000415143 NME9Q86XW9 330 aa17.32■□□□□ 0.36
SSR4P1-201ENST00000415143 BRWD3Q6RI45 1802 aa17.31■□□□□ 0.36
SSR4P1-201ENST00000415143 AKAP12Q02952 1782 aa17.31■□□□□ 0.36
SSR4P1-201ENST00000415143 KDM2BQ8NHM5 1336 aa17.31■□□□□ 0.36
SSR4P1-201ENST00000415143 NALCNQ8IZF0 1738 aa17.31■□□□□ 0.36
SSR4P1-201ENST00000415143 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
SSR4P1-201ENST00000415143 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
SSR4P1-201ENST00000415143 GJD4Q96KN9 370 aaPredicted RBP17.3■□□□□ 0.36
SSR4P1-201ENST00000415143 BCL9LQ86UU0 1499 aa17.3■□□□□ 0.36
SSR4P1-201ENST00000415143 IPO8O15397 1037 aaKnown RBP17.29■□□□□ 0.36
SSR4P1-201ENST00000415143 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
SSR4P1-201ENST00000415143 NFE2L2Q16236 605 aa17.29■□□□□ 0.36
SSR4P1-201ENST00000415143 ZKSCAN2Q63HK3 967 aa17.29■□□□□ 0.36
SSR4P1-201ENST00000415143 FRAT1Q92837 279 aaPredicted RBP17.29■□□□□ 0.36
SSR4P1-201ENST00000415143 RSPH6AQ9H0K4 717 aa17.29■□□□□ 0.36
SSR4P1-201ENST00000415143 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
SSR4P1-201ENST00000415143 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
SSR4P1-201ENST00000415143 ADGRL3Q9HAR2 1447 aa17.29■□□□□ 0.36
SSR4P1-201ENST00000415143 ACEP12821 1306 aa17.28■□□□□ 0.36
SSR4P1-201ENST00000415143 PRR36Q9H6K5 1346 aa17.28■□□□□ 0.36
SSR4P1-201ENST00000415143 YY1P25490 414 aa17.28■□□□□ 0.36
SSR4P1-201ENST00000415143 IL13P35225 146 aa17.28■□□□□ 0.36
SSR4P1-201ENST00000415143 CLUAP1Q96AJ1 413 aa17.28■□□□□ 0.36
SSR4P1-201ENST00000415143 ANP32EQ9BTT0 268 aa17.28■□□□□ 0.36
SSR4P1-201ENST00000415143 PDE4AP27815 886 aa17.27■□□□□ 0.36
SSR4P1-201ENST00000415143 CHMP4BQ9H444 224 aaKnown RBP17.27■□□□□ 0.36
SSR4P1-201ENST00000415143 COL22A1Q8NFW1 1626 aaPredicted RBP17.27■□□□□ 0.36
SSR4P1-201ENST00000415143 SOS2Q07890 1332 aaPredicted RBP17.26■□□□□ 0.35
SSR4P1-201ENST00000415143 C1orf167Q5SNV9 1468 aa17.26■□□□□ 0.35
SSR4P1-201ENST00000415143 HAP1P54257 671 aaPredicted RBP17.26■□□□□ 0.35
SSR4P1-201ENST00000415143 GNAI1P63096 354 aa17.26■□□□□ 0.35
SSR4P1-201ENST00000415143 ALDH1L2Q3SY69 923 aa17.26■□□□□ 0.35
SSR4P1-201ENST00000415143 USP6P35125 1406 aa17.26■□□□□ 0.35
SSR4P1-201ENST00000415143 ANKARQ7Z5J8 1434 aa17.26■□□□□ 0.35
SSR4P1-201ENST00000415143 GLI3P10071 1580 aa17.25■□□□□ 0.35
SSR4P1-201ENST00000415143 FTSJ3Q8IY81 847 aaKnown RBP17.25■□□□□ 0.35
SSR4P1-201ENST00000415143 BACH2Q9BYV9 841 aa17.25■□□□□ 0.35
SSR4P1-201ENST00000415143 EMILIN1Q9Y6C2 1016 aa17.25■□□□□ 0.35
SSR4P1-201ENST00000415143 TOPAZ1Q8N9V7 1692 aa17.25■□□□□ 0.35
SSR4P1-201ENST00000415143 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
SSR4P1-201ENST00000415143 MAP2P11137 1827 aaKnown RBP17.24■□□□□ 0.35
SSR4P1-201ENST00000415143 EXOSC9Q06265 439 aaKnown RBP17.24■□□□□ 0.35
SSR4P1-201ENST00000415143 NGDNQ8NEJ9 315 aaKnown RBP17.24■□□□□ 0.35
SSR4P1-201ENST00000415143 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
SSR4P1-201ENST00000415143 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.24■□□□□ 0.35
SSR4P1-201ENST00000415143 ORAI2Q96SN7 254 aa17.23■□□□□ 0.35
SSR4P1-201ENST00000415143 RWDD1Q9H446 243 aaPredicted RBP17.23■□□□□ 0.35
SSR4P1-201ENST00000415143 IFT57Q9NWB7 429 aa17.23■□□□□ 0.35
SSR4P1-201ENST00000415143 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
SSR4P1-201ENST00000415143 COG6Q9Y2V7 657 aa17.22■□□□□ 0.35
SSR4P1-201ENST00000415143 USP31Q70CQ4 1352 aa17.22■□□□□ 0.35
SSR4P1-201ENST00000415143 PANK1Q8TE04 598 aa17.21■□□□□ 0.35
SSR4P1-201ENST00000415143 IPO9Q96P70 1041 aaKnown RBP17.21■□□□□ 0.35
SSR4P1-201ENST00000415143 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.34
SSR4P1-201ENST00000415143 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.34
SSR4P1-201ENST00000415143 MVPQ14764 893 aaKnown RBP17.2■□□□□ 0.34
SSR4P1-201ENST00000415143 TSR2Q969E8 191 aaKnown RBP17.2■□□□□ 0.34
SSR4P1-201ENST00000415143 DDX19BQ9UMR2 479 aa17.2■□□□□ 0.34
SSR4P1-201ENST00000415143 HMOX1P09601 288 aa17.19■□□□□ 0.34
SSR4P1-201ENST00000415143 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
SSR4P1-201ENST00000415143 FAM161AQ3B820 660 aa17.19■□□□□ 0.34
SSR4P1-201ENST00000415143 DDRGK1Q96HY6 314 aa17.19■□□□□ 0.34
SSR4P1-201ENST00000415143 NRKQ7Z2Y5 1582 aa17.19■□□□□ 0.34
SSR4P1-201ENST00000415143 BAG6P46379 1132 aa17.18■□□□□ 0.34
SSR4P1-201ENST00000415143 RRS1Q15050 365 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms