RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 NUTM2FA1L443 756 aa16.67■□□□□ 0.26
LITAF-203ENST00000413364 CT47B1P0C2W7 299 aaPredicted RBP16.67■□□□□ 0.26
LITAF-203ENST00000413364 CANXP27824 592 aaKnown RBP16.66■□□□□ 0.26
LITAF-203ENST00000413364 CENPQQ7L2Z9 268 aaPredicted RBP16.66■□□□□ 0.26
LITAF-203ENST00000413364 OVOS2A0A0J9YW53 1432 aa16.66■□□□□ 0.26
LITAF-203ENST00000413364 OVOS2Q6IE36 1432 aa16.66■□□□□ 0.26
LITAF-203ENST00000413364 SSH2Q76I76 1423 aa16.66■□□□□ 0.26
LITAF-203ENST00000413364 PDIA4P13667 645 aaKnown RBP16.65■□□□□ 0.26
LITAF-203ENST00000413364 RRS1Q15050 365 aaKnown RBP16.65■□□□□ 0.26
LITAF-203ENST00000413364 MS4A1P11836 297 aa16.65■□□□□ 0.26
LITAF-203ENST00000413364 ADAMTSL3P82987 1691 aa16.64■□□□□ 0.25
LITAF-203ENST00000413364 TSR2Q969E8 191 aaKnown RBP16.64■□□□□ 0.25
LITAF-203ENST00000413364 ZNF142P52746 1687 aaPredicted RBP16.64■□□□□ 0.25
LITAF-203ENST00000413364 HMOX1P09601 288 aa16.63■□□□□ 0.25
LITAF-203ENST00000413364 KCNA6P17658 529 aa16.63■□□□□ 0.25
LITAF-203ENST00000413364 NFE2L2Q16236 605 aa16.63■□□□□ 0.25
LITAF-203ENST00000413364 FRAT1Q92837 279 aaPredicted RBP16.63■□□□□ 0.25
LITAF-203ENST00000413364 TTC21AQ8NDW8 1320 aa16.63■□□□□ 0.25
LITAF-203ENST00000413364 ANKARQ7Z5J8 1434 aa16.62■□□□□ 0.25
LITAF-203ENST00000413364 A0A0U1RQG5 324 aaPredicted RBP16.62■□□□□ 0.25
LITAF-203ENST00000413364 PANK1Q8TE04 598 aa16.62■□□□□ 0.25
LITAF-203ENST00000413364 USP31Q70CQ4 1352 aa16.62■□□□□ 0.25
LITAF-203ENST00000413364 EXOSC9Q06265 439 aaKnown RBP16.62■□□□□ 0.25
LITAF-203ENST00000413364 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
LITAF-203ENST00000413364 NALCNQ8IZF0 1738 aa16.62■□□□□ 0.25
LITAF-203ENST00000413364 PHACTR3Q96KR7 559 aa16.61■□□□□ 0.25
LITAF-203ENST00000413364 BCL2L13Q9BXK5 485 aa16.6■□□□□ 0.25
LITAF-203ENST00000413364 COG6Q9Y2V7 657 aa16.6■□□□□ 0.25
LITAF-203ENST00000413364 PMFBP1Q8TBY8 1022 aa16.59■□□□□ 0.25
LITAF-203ENST00000413364 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
LITAF-203ENST00000413364 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.25
LITAF-203ENST00000413364 CALD1Q05682 793 aaKnown RBP16.58■□□□□ 0.24
LITAF-203ENST00000413364 RGPD8O14715 1765 aaPredicted RBP16.57■□□□□ 0.24
LITAF-203ENST00000413364 FMN2Q9NZ56 1722 aa16.57■□□□□ 0.24
LITAF-203ENST00000413364 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
LITAF-203ENST00000413364 RLBP1P12271 317 aa16.57■□□□□ 0.24
LITAF-203ENST00000413364 ZKSCAN2Q63HK3 967 aa16.56■□□□□ 0.24
LITAF-203ENST00000413364 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
LITAF-203ENST00000413364 PEAK1Q9H792 1746 aa16.56■□□□□ 0.24
LITAF-203ENST00000413364 HSP90AA1P07900 732 aaKnown RBP16.56■□□□□ 0.24
LITAF-203ENST00000413364 PDE4AP27815 886 aa16.56■□□□□ 0.24
LITAF-203ENST00000413364 LMOD3Q0VAK6 560 aa16.56■□□□□ 0.24
LITAF-203ENST00000413364 SMC4Q9NTJ3 1288 aa16.56■□□□□ 0.24
LITAF-203ENST00000413364 TNNQ9UQP3 1299 aa16.56■□□□□ 0.24
LITAF-203ENST00000413364 SKAP1Q86WV1 359 aa16.55■□□□□ 0.24
LITAF-203ENST00000413364 SSH1Q8WYL5 1049 aa16.55■□□□□ 0.24
LITAF-203ENST00000413364 SETD1BQ9UPS6 1966 aaKnown RBP16.55■□□□□ 0.24
LITAF-203ENST00000413364 BACH2Q9BYV9 841 aa16.54■□□□□ 0.24
LITAF-203ENST00000413364 IFT57Q9NWB7 429 aa16.53■□□□□ 0.24
LITAF-203ENST00000413364 IGHDP01880 384 aa16.53■□□□□ 0.24
LITAF-203ENST00000413364 PIK3C2AO00443 1686 aa16.53■□□□□ 0.24
LITAF-203ENST00000413364 GNAI1P63096 354 aa16.52■□□□□ 0.24
LITAF-203ENST00000413364 HSP90AB2PQ58FF8 381 aa16.52■□□□□ 0.24
LITAF-203ENST00000413364 DZIP1LQ8IYY4 767 aaKnown RBP16.52■□□□□ 0.24
LITAF-203ENST00000413364 THUMPD2Q9BTF0 503 aaKnown RBP16.52■□□□□ 0.24
LITAF-203ENST00000413364 MAP3K19Q56UN5 1328 aa16.52■□□□□ 0.23
LITAF-203ENST00000413364 ZNF853P0CG23 659 aa16.52■□□□□ 0.23
LITAF-203ENST00000413364 MVPQ14764 893 aaKnown RBP16.52■□□□□ 0.23
LITAF-203ENST00000413364 ALDH1L2Q3SY69 923 aa16.52■□□□□ 0.23
LITAF-203ENST00000413364 SULT6B1Q6IMI4 303 aa16.52■□□□□ 0.23
LITAF-203ENST00000413364 ZNF428Q96B54 188 aa16.52■□□□□ 0.23
LITAF-203ENST00000413364 RGPD1P0DJD0 1748 aa16.52■□□□□ 0.23
LITAF-203ENST00000413364 AEBP1Q8IUX7 1158 aa16.51■□□□□ 0.23
LITAF-203ENST00000413364 FTSJ3Q8IY81 847 aaKnown RBP16.51■□□□□ 0.23
LITAF-203ENST00000413364 LAS1LQ9Y4W2 734 aaKnown RBP16.51■□□□□ 0.23
LITAF-203ENST00000413364 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
LITAF-203ENST00000413364 NPHP4O75161 1426 aaPredicted RBP16.5■□□□□ 0.23
LITAF-203ENST00000413364 FLT4P35916 1363 aa16.5■□□□□ 0.23
LITAF-203ENST00000413364 DLG5Q8TDM6 1919 aa16.5■□□□□ 0.23
LITAF-203ENST00000413364 SOX12O15370 315 aa16.5■□□□□ 0.23
LITAF-203ENST00000413364 KIF16BQ96L93 1317 aa16.5■□□□□ 0.23
LITAF-203ENST00000413364 ARHGEF10O15013 1369 aa16.49■□□□□ 0.23
LITAF-203ENST00000413364 TRIM27P14373 513 aa16.49■□□□□ 0.23
LITAF-203ENST00000413364 ATF7IPQ6VMQ6 1270 aa16.49■□□□□ 0.23
LITAF-203ENST00000413364 USP54Q70EL1 1684 aa16.49■□□□□ 0.23
LITAF-203ENST00000413364 IPO8O15397 1037 aaKnown RBP16.48■□□□□ 0.23
LITAF-203ENST00000413364 BRPF1P55201 1214 aaPredicted RBP16.48■□□□□ 0.23
LITAF-203ENST00000413364 CFAP44Q96MT7 982 aa16.48■□□□□ 0.23
LITAF-203ENST00000413364 ADGRL3Q9HAR2 1447 aa16.48■□□□□ 0.23
LITAF-203ENST00000413364 NOB1Q9ULX3 412 aaKnown RBP16.48■□□□□ 0.23
LITAF-203ENST00000413364 NLRP6P59044 892 aa16.48■□□□□ 0.23
LITAF-203ENST00000413364 MBIPQ9NS73 344 aa16.48■□□□□ 0.23
LITAF-203ENST00000413364 PCDHB15Q9Y5E8 787 aa16.48■□□□□ 0.23
LITAF-203ENST00000413364 PHF8Q9UPP1 1060 aa16.47■□□□□ 0.23
LITAF-203ENST00000413364 FAM83GA6ND36 823 aa16.46■□□□□ 0.23
LITAF-203ENST00000413364 VAMP4O75379 141 aa16.46■□□□□ 0.23
LITAF-203ENST00000413364 AMPHP49418 695 aa16.46■□□□□ 0.23
LITAF-203ENST00000413364 KIF24Q5T7B8 1368 aa16.46■□□□□ 0.23
LITAF-203ENST00000413364 MARF1Q9Y4F3 1742 aaKnown RBP16.46■□□□□ 0.23
LITAF-203ENST00000413364 DDX19BQ9UMR2 479 aa16.45■□□□□ 0.22
LITAF-203ENST00000413364 RGS3P49796 1198 aa16.44■□□□□ 0.22
LITAF-203ENST00000413364 DCTN1Q14203 1278 aa16.44■□□□□ 0.22
LITAF-203ENST00000413364 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
LITAF-203ENST00000413364 TSPYL6Q8N831 410 aa16.44■□□□□ 0.22
LITAF-203ENST00000413364 ABTB2Q8N961 1025 aa16.44■□□□□ 0.22
LITAF-203ENST00000413364 RWDD1Q9H446 243 aaPredicted RBP16.44■□□□□ 0.22
LITAF-203ENST00000413364 KDRP35968 1356 aa16.44■□□□□ 0.22
LITAF-203ENST00000413364 IGSF1Q8N6C5 1336 aa16.43■□□□□ 0.22
LITAF-203ENST00000413364 ITPRIPQ8IWB1 547 aa16.43■□□□□ 0.22
LITAF-203ENST00000413364 RBM33Q96EV2 1170 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms