RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 KIF16BQ96L93 1317 aa19.31■□□□□ 0.68
ATG4B-205ENST00000404914 CCDC173Q0VFZ6 552 aa19.31■□□□□ 0.68
ATG4B-205ENST00000404914 ZBTB7BO15156 539 aaPredicted RBP19.3■□□□□ 0.68
ATG4B-205ENST00000404914 A0A1W2PP64 1363 aa19.3■□□□□ 0.68
ATG4B-205ENST00000404914 RIMS1Q86UR5 1692 aaKnown RBP19.3■□□□□ 0.68
ATG4B-205ENST00000404914 ADAMTSL3P82987 1691 aa19.3■□□□□ 0.68
ATG4B-205ENST00000404914 TPM2P07951 284 aa19.3■□□□□ 0.68
ATG4B-205ENST00000404914 ZSCAN30Q86W11 494 aa19.3■□□□□ 0.68
ATG4B-205ENST00000404914 CHAMP1Q96JM3 812 aa19.3■□□□□ 0.68
ATG4B-205ENST00000404914 THUMPD2Q9BTF0 503 aaKnown RBP19.3■□□□□ 0.68
ATG4B-205ENST00000404914 C3P01024 1663 aa19.3■□□□□ 0.68
ATG4B-205ENST00000404914 FBLN1P23142 703 aa19.29■□□□□ 0.68
ATG4B-205ENST00000404914 RBM10P98175 930 aaKnown RBP19.29■□□□□ 0.68
ATG4B-205ENST00000404914 IPO8O15397 1037 aaKnown RBP19.28■□□□□ 0.68
ATG4B-205ENST00000404914 KLHL40Q2TBA0 621 aa19.28■□□□□ 0.68
ATG4B-205ENST00000404914 MCTP1Q6DN14 999 aa19.28■□□□□ 0.68
ATG4B-205ENST00000404914 GSPT1P15170 499 aaKnown RBP19.27■□□□□ 0.68
ATG4B-205ENST00000404914 TSPYL6Q8N831 410 aa19.27■□□□□ 0.68
ATG4B-205ENST00000404914 IL16Q14005 1332 aa19.27■□□□□ 0.68
ATG4B-205ENST00000404914 EVC2Q86UK5 1308 aa19.27■□□□□ 0.68
ATG4B-205ENST00000404914 MED14O60244 1454 aa19.27■□□□□ 0.68
ATG4B-205ENST00000404914 NSD2O96028 1365 aa19.27■□□□□ 0.68
ATG4B-205ENST00000404914 ELL2O00472 640 aaPredicted RBP19.27■□□□□ 0.68
ATG4B-205ENST00000404914 ATAD2Q6PL18 1390 aa19.27■□□□□ 0.67
ATG4B-205ENST00000404914 CAVIN1Q6NZI2 390 aaKnown RBP19.26■□□□□ 0.67
ATG4B-205ENST00000404914 OFD1O75665 1012 aa19.26■□□□□ 0.67
ATG4B-205ENST00000404914 NCLP19338 710 aaKnown RBP19.26■□□□□ 0.67
ATG4B-205ENST00000404914 RBSNQ9H1K0 784 aa19.26■□□□□ 0.67
ATG4B-205ENST00000404914 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
ATG4B-205ENST00000404914 CLEC17AQ6ZS10 378 aa19.25■□□□□ 0.67
ATG4B-205ENST00000404914 FYB1O15117 783 aa19.25■□□□□ 0.67
ATG4B-205ENST00000404914 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.25■□□□□ 0.67
ATG4B-205ENST00000404914 IDI1Q13907 227 aa19.24■□□□□ 0.67
ATG4B-205ENST00000404914 RBM27Q9P2N5 1060 aaKnown RBP19.24■□□□□ 0.67
ATG4B-205ENST00000404914 PIK3C2BO00750 1634 aa19.24■□□□□ 0.67
ATG4B-205ENST00000404914 ALDH1L2Q3SY69 923 aa19.24■□□□□ 0.67
ATG4B-205ENST00000404914 SPATA31D1Q6ZQQ2 1576 aa19.24■□□□□ 0.67
ATG4B-205ENST00000404914 ZSCAN23Q3MJ62 389 aa19.23■□□□□ 0.67
ATG4B-205ENST00000404914 LMBRD1Q9NUN5 540 aa19.23■□□□□ 0.67
ATG4B-205ENST00000404914 MYO5BQ9ULV0 1848 aa19.23■□□□□ 0.67
ATG4B-205ENST00000404914 PDCL3Q9H2J4 239 aa19.23■□□□□ 0.67
ATG4B-205ENST00000404914 C16orf71Q8IYS4 520 aaPredicted RBP19.22■□□□□ 0.67
ATG4B-205ENST00000404914 MRPL50Q8N5N7 158 aaKnown RBP19.22■□□□□ 0.67
ATG4B-205ENST00000404914 GCC1Q96CN9 775 aa19.22■□□□□ 0.67
ATG4B-205ENST00000404914 STK26Q9P289 416 aa19.22■□□□□ 0.67
ATG4B-205ENST00000404914 GOLGA6L22H0YM25 854 aa19.22■□□□□ 0.67
ATG4B-205ENST00000404914 VAMP4O75379 141 aa19.22■□□□□ 0.67
ATG4B-205ENST00000404914 MSNP26038 577 aaKnown RBP19.22■□□□□ 0.67
ATG4B-205ENST00000404914 XPCQ01831 940 aaPredicted RBP19.22■□□□□ 0.67
ATG4B-205ENST00000404914 R3HCC1Q9Y3T6 440 aaKnown RBP19.22■□□□□ 0.67
ATG4B-205ENST00000404914 IBTKQ9P2D0 1353 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-205ENST00000404914 CDC45O75419 566 aa19.21■□□□□ 0.67
ATG4B-205ENST00000404914 PTMSP20962 102 aa19.21■□□□□ 0.67
ATG4B-205ENST00000404914 PRIM1P49642 420 aaKnown RBP19.21■□□□□ 0.67
ATG4B-205ENST00000404914 ZNF445P59923 1031 aa19.21■□□□□ 0.67
ATG4B-205ENST00000404914 ZGPATQ8N5A5 531 aaKnown RBP19.21■□□□□ 0.67
ATG4B-205ENST00000404914 DIAPH1O60610 1272 aaKnown RBP19.21■□□□□ 0.67
ATG4B-205ENST00000404914 SRPK2P78362 688 aaKnown RBP19.21■□□□□ 0.67
ATG4B-205ENST00000404914 OTUD7AQ8TE49 926 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-205ENST00000404914 PHACTR3Q96KR7 559 aa19.21■□□□□ 0.67
ATG4B-205ENST00000404914 CYP2E1P05181 493 aaPredicted RBP19.2■□□□□ 0.66
ATG4B-205ENST00000404914 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
ATG4B-205ENST00000404914 PRKAR2BP31323 418 aa19.2■□□□□ 0.66
ATG4B-205ENST00000404914 PLEKHM2Q8IWE5 1019 aa19.19■□□□□ 0.66
ATG4B-205ENST00000404914 GPT2Q8TD30 523 aa19.19■□□□□ 0.66
ATG4B-205ENST00000404914 NSFL1CQ9UNZ2 370 aaKnown RBP19.19■□□□□ 0.66
ATG4B-205ENST00000404914 KNDC1Q76NI1 1749 aa19.19■□□□□ 0.66
ATG4B-205ENST00000404914 HMOX1P09601 288 aa19.18■□□□□ 0.66
ATG4B-205ENST00000404914 ANP32BQ92688 251 aaKnown RBP19.18■□□□□ 0.66
ATG4B-205ENST00000404914 ZDHHC9Q9Y397 364 aa19.18■□□□□ 0.66
ATG4B-205ENST00000404914 KDM4FA0A1W2PPD8 638 aa19.17■□□□□ 0.66
ATG4B-205ENST00000404914 PRPF40AO75400 957 aaKnown RBP19.17■□□□□ 0.66
ATG4B-205ENST00000404914 CALD1Q05682 793 aaKnown RBP19.17■□□□□ 0.66
ATG4B-205ENST00000404914 CD163L1Q9NR16 1453 aa19.17■□□□□ 0.66
ATG4B-205ENST00000404914 PIK3R4Q99570 1358 aa19.17■□□□□ 0.66
ATG4B-205ENST00000404914 FAM13BQ9NYF5 915 aa19.17■□□□□ 0.66
ATG4B-205ENST00000404914 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
ATG4B-205ENST00000404914 MINK1Q8N4C8 1332 aaPredicted RBP19.17■□□□□ 0.66
ATG4B-205ENST00000404914 PDLIM2Q96JY6 352 aa19.16■□□□□ 0.66
ATG4B-205ENST00000404914 USP26Q9BXU7 913 aa19.16■□□□□ 0.66
ATG4B-205ENST00000404914 TNRQ92752 1358 aa19.16■□□□□ 0.66
ATG4B-205ENST00000404914 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.16■□□□□ 0.66
ATG4B-205ENST00000404914 ABCC4O15439 1325 aa19.16■□□□□ 0.66
ATG4B-205ENST00000404914 BRPF1P55201 1214 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-205ENST00000404914 FOXD4L5Q5VV16 416 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-205ENST00000404914 FOXD4L4Q8WXT5 416 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-205ENST00000404914 ARID3AQ99856 593 aa19.15■□□□□ 0.66
ATG4B-205ENST00000404914 TMEM131LA2VDJ0 1609 aa19.15■□□□□ 0.66
ATG4B-205ENST00000404914 RABEP1Q15276 862 aa19.15■□□□□ 0.66
ATG4B-205ENST00000404914 PUS7Q96PZ0 661 aaKnown RBP19.15■□□□□ 0.66
ATG4B-205ENST00000404914 NOL7Q9UMY1 257 aaKnown RBP19.15■□□□□ 0.66
ATG4B-205ENST00000404914 PTPRMP28827 1452 aa19.14■□□□□ 0.66
ATG4B-205ENST00000404914 SLC52A1Q9NWF4 448 aa19.14■□□□□ 0.65
ATG4B-205ENST00000404914 TMEM63CQ9P1W3 806 aa19.14■□□□□ 0.65
ATG4B-205ENST00000404914 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
ATG4B-205ENST00000404914 MBIPQ9NS73 344 aa19.14■□□□□ 0.65
ATG4B-205ENST00000404914 C8orf58Q8NAV2 365 aa19.13■□□□□ 0.65
ATG4B-205ENST00000404914 TTC22Q5TAA0 569 aa19.13■□□□□ 0.65
ATG4B-205ENST00000404914 FAM135BQ49AJ0 1406 aa19.13■□□□□ 0.65
ATG4B-205ENST00000404914 ANKRD26Q9UPS8 1709 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms