RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 MTMR7Q9Y216 660 aa17.51■□□□□ 0.39
GABPA-202ENST00000400075 CEP170Q5SW79 1584 aa17.51■□□□□ 0.39
GABPA-202ENST00000400075 HSP90AB3PQ58FF7 597 aa17.51■□□□□ 0.39
GABPA-202ENST00000400075 ZCRB1Q8TBF4 217 aaKnown RBP17.51■□□□□ 0.39
GABPA-202ENST00000400075 FSD1Q9BTV5 496 aa17.51■□□□□ 0.39
GABPA-202ENST00000400075 MCM10Q7L590 875 aa17.51■□□□□ 0.39
GABPA-202ENST00000400075 SLC3A2P08195 630 aaKnown RBP17.51■□□□□ 0.39
GABPA-202ENST00000400075 ZSCAN29Q8IWY8 852 aaPredicted RBP17.51■□□□□ 0.39
GABPA-202ENST00000400075 DNAJC2Q99543 621 aaKnown RBP17.51■□□□□ 0.39
GABPA-202ENST00000400075 ZNF219Q9P2Y4 722 aaPredicted RBP17.51■□□□□ 0.39
GABPA-202ENST00000400075 PHF14O94880 888 aa17.5■□□□□ 0.39
GABPA-202ENST00000400075 CHAF1AQ13111 956 aaPredicted RBP17.5■□□□□ 0.39
GABPA-202ENST00000400075 TTC39AQ5SRH9 613 aa17.5■□□□□ 0.39
GABPA-202ENST00000400075 TTC21BQ7Z4L5 1316 aa17.5■□□□□ 0.39
GABPA-202ENST00000400075 SLC4A3P48751 1232 aa17.5■□□□□ 0.39
GABPA-202ENST00000400075 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
GABPA-202ENST00000400075 CCDC43Q96MW1 224 aaKnown RBP17.5■□□□□ 0.39
GABPA-202ENST00000400075 RPGRQ92834 1020 aaKnown RBP17.5■□□□□ 0.39
GABPA-202ENST00000400075 WDHD1O75717 1129 aaPredicted RBP17.5■□□□□ 0.39
GABPA-202ENST00000400075 EXOC6Q8TAG9 804 aa17.5■□□□□ 0.39
GABPA-202ENST00000400075 SMARCC1Q92922 1105 aaPredicted RBP17.5■□□□□ 0.39
GABPA-202ENST00000400075 LNPKQ9C0E8 428 aa17.5■□□□□ 0.39
GABPA-202ENST00000400075 SIL1Q9H173 461 aa17.49■□□□□ 0.39
GABPA-202ENST00000400075 MIS18AQ9NYP9 233 aa17.49■□□□□ 0.39
GABPA-202ENST00000400075 PANK1Q8TE04 598 aa17.49■□□□□ 0.39
GABPA-202ENST00000400075 GBP4Q96PP9 640 aa17.49■□□□□ 0.39
GABPA-202ENST00000400075 PAXIP1Q6ZW49 1069 aaPredicted RBP17.48■□□□□ 0.39
GABPA-202ENST00000400075 SLAIN2Q9P270 581 aa17.48■□□□□ 0.39
GABPA-202ENST00000400075 TMPOP42166 694 aaKnown RBP17.47■□□□□ 0.39
GABPA-202ENST00000400075 LARP1Q6PKG0 1096 aaKnown RBP17.47■□□□□ 0.39
GABPA-202ENST00000400075 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
GABPA-202ENST00000400075 POLD1P28340 1107 aa17.47■□□□□ 0.39
GABPA-202ENST00000400075 ATP2B2Q01814 1243 aa17.47■□□□□ 0.39
GABPA-202ENST00000400075 DNTTIP2Q5QJE6 756 aaKnown RBP17.47■□□□□ 0.39
GABPA-202ENST00000400075 TRMT112Q9UI30 125 aaKnown RBP17.47■□□□□ 0.39
GABPA-202ENST00000400075 SLKQ9H2G2 1235 aaPredicted RBP17.47■□□□□ 0.39
GABPA-202ENST00000400075 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.46■□□□□ 0.39
GABPA-202ENST00000400075 CSPP1Q1MSJ5 1256 aa17.46■□□□□ 0.39
GABPA-202ENST00000400075 FAM161AQ3B820 660 aa17.46■□□□□ 0.39
GABPA-202ENST00000400075 MCTP1Q6DN14 999 aa17.46■□□□□ 0.39
GABPA-202ENST00000400075 SART3Q15020 963 aaKnown RBP17.46■□□□□ 0.39
GABPA-202ENST00000400075 SCAF11Q99590 1463 aaKnown RBP17.46■□□□□ 0.39
GABPA-202ENST00000400075 AAMPQ13685 434 aa17.45■□□□□ 0.38
GABPA-202ENST00000400075 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
GABPA-202ENST00000400075 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
GABPA-202ENST00000400075 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
GABPA-202ENST00000400075 ZNF622Q969S3 477 aaKnown RBP eCLIP17.45■□□□□ 0.384e-6■□□□□ 9.9
GABPA-202ENST00000400075 THUMPD2Q9BTF0 503 aaKnown RBP17.45■□□□□ 0.38
GABPA-202ENST00000400075 BTG4Q9NY30 223 aa17.45■□□□□ 0.38
GABPA-202ENST00000400075 DRC7Q8IY82 874 aa17.45■□□□□ 0.38
GABPA-202ENST00000400075 A0A087WZG4 1122 aa17.44■□□□□ 0.38
GABPA-202ENST00000400075 IL2RBP14784 551 aa17.44■□□□□ 0.38
GABPA-202ENST00000400075 CREBRFQ8IUR6 639 aa17.44■□□□□ 0.38
GABPA-202ENST00000400075 NINLQ9Y2I6 1382 aa17.44■□□□□ 0.38
GABPA-202ENST00000400075 KIAA2012Q0VF49 1180 aa17.44■□□□□ 0.38
GABPA-202ENST00000400075 TFCP2L1Q9NZI6 479 aa17.44■□□□□ 0.38
GABPA-202ENST00000400075 CNTROBQ8N137 903 aa17.44■□□□□ 0.38
GABPA-202ENST00000400075 GCP02774 474 aa17.43■□□□□ 0.38
GABPA-202ENST00000400075 NEO1Q92859 1461 aa17.43■□□□□ 0.38
GABPA-202ENST00000400075 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
GABPA-202ENST00000400075 C6orf229H3BNL8 230 aa17.43■□□□□ 0.38
GABPA-202ENST00000400075 CT47B1P0C2W7 299 aaPredicted RBP17.42■□□□□ 0.38
GABPA-202ENST00000400075 NACAP1Q9BZK3 213 aa17.42■□□□□ 0.38
GABPA-202ENST00000400075 GPTP24298 496 aa17.42■□□□□ 0.38
GABPA-202ENST00000400075 CDCA7LQ96GN5 454 aa17.42■□□□□ 0.38
GABPA-202ENST00000400075 RAI14Q9P0K7 980 aa17.42■□□□□ 0.38
GABPA-202ENST00000400075 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
GABPA-202ENST00000400075 SRGAP3O43295 1099 aa17.41■□□□□ 0.38
GABPA-202ENST00000400075 METTL24Q5JXM2 366 aa17.41■□□□□ 0.38
GABPA-202ENST00000400075 SYAP1Q96A49 352 aaPredicted RBP17.41■□□□□ 0.38
GABPA-202ENST00000400075 ZBTB3Q9H5J0 574 aa17.41■□□□□ 0.38
GABPA-202ENST00000400075 ATP6V1AP38606 617 aa17.41■□□□□ 0.38
GABPA-202ENST00000400075 SAFBQ15424 915 aaKnown RBP eCLIP17.41■□□□□ 0.38
GABPA-202ENST00000400075 RRP12Q5JTH9 1297 aaKnown RBP17.41■□□□□ 0.38
GABPA-202ENST00000400075 TPM4P67936 248 aa17.41■□□□□ 0.38
GABPA-202ENST00000400075 INTS3Q68E01 1043 aaKnown RBP17.41■□□□□ 0.38
GABPA-202ENST00000400075 LRP2BPQ9P2M1 347 aa17.41■□□□□ 0.38
GABPA-202ENST00000400075 ABCF2Q9UG63 623 aa17.41■□□□□ 0.38
GABPA-202ENST00000400075 HSP90AB2PQ58FF8 381 aa17.4■□□□□ 0.38
GABPA-202ENST00000400075 IFIT1P09914 478 aaKnown RBP17.4■□□□□ 0.38
GABPA-202ENST00000400075 TTLL12Q14166 644 aaPredicted RBP17.4■□□□□ 0.38
GABPA-202ENST00000400075 CAVIN4Q5BKX8 364 aa17.4■□□□□ 0.38
GABPA-202ENST00000400075 ORAI2Q96SN7 254 aa17.4■□□□□ 0.38
GABPA-202ENST00000400075 DBF4Q9UBU7 674 aaPredicted RBP17.4■□□□□ 0.38
GABPA-202ENST00000400075 FKBP4Q02790 459 aaKnown RBP eCLIP17.4■□□□□ 0.38
GABPA-202ENST00000400075 DISP1Q96F81 1524 aa17.39■□□□□ 0.38
GABPA-202ENST00000400075 MYD88Q99836 296 aa17.39■□□□□ 0.37
GABPA-202ENST00000400075 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
GABPA-202ENST00000400075 DDX46Q7L014 1031 aaKnown RBP17.39■□□□□ 0.37
GABPA-202ENST00000400075 NBPF5PQ86XG9 351 aaPredicted RBP17.39■□□□□ 0.37
GABPA-202ENST00000400075 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
GABPA-202ENST00000400075 ZSCAN25Q6NSZ9 544 aa17.38■□□□□ 0.37
GABPA-202ENST00000400075 ITSN2Q9NZM3 1697 aa17.38■□□□□ 0.37
GABPA-202ENST00000400075 PPP1R42Q7Z4L9 355 aa17.38■□□□□ 0.37
GABPA-202ENST00000400075 NOP58Q9Y2X3 529 aaKnown RBP17.38■□□□□ 0.37
GABPA-202ENST00000400075 ATP6V1DQ9Y5K8 247 aa17.38■□□□□ 0.37
GABPA-202ENST00000400075 ST5P78524 1137 aa17.38■□□□□ 0.37
GABPA-202ENST00000400075 IFIT5Q13325 482 aaKnown RBP17.38■□□□□ 0.37
GABPA-202ENST00000400075 CDCA7Q9BWT1 371 aaPredicted RBP17.38■□□□□ 0.37
GABPA-202ENST00000400075 USP21Q9UK80 565 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms