RNA–Protein interactions for RNA: ENST00000394121.8

THRA-202, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 2 BASIC

Gene THRA, Length 2,260 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-202ENST00000394121 FTSJ3Q8IY81 847 aaKnown RBP29.57■■■□□ 2.32
THRA-202ENST00000394121 STRCP1A6NGW2 1772 aa29.57■■■□□ 2.32
THRA-202ENST00000394121 ADGRL3Q9HAR2 1447 aa29.56■■■□□ 2.32
THRA-202ENST00000394121 TMPOP42166 694 aaKnown RBP29.56■■■□□ 2.32
THRA-202ENST00000394121 ZRANB1Q9UGI0 708 aa29.56■■■□□ 2.32
THRA-202ENST00000394121 PLEKHG3A1L390 1219 aa29.55■■■□□ 2.32
THRA-202ENST00000394121 TSR2Q969E8 191 aaKnown RBP29.55■■■□□ 2.32
THRA-202ENST00000394121 CDC42BPGQ6DT37 1551 aa29.54■■■□□ 2.32
THRA-202ENST00000394121 ZNF335Q9H4Z2 1342 aaPredicted RBP29.54■■■□□ 2.32
THRA-202ENST00000394121 U2SURPO15042 1029 aaKnown RBP29.54■■■□□ 2.32
THRA-202ENST00000394121 TBC1D32Q96NH3 1257 aa29.54■■■□□ 2.32
THRA-202ENST00000394121 NME9Q86XW9 330 aa29.54■■■□□ 2.32
THRA-202ENST00000394121 TMEM94Q12767 1356 aa29.53■■■□□ 2.32
THRA-202ENST00000394121 RGPD8O14715 1765 aaPredicted RBP29.53■■■□□ 2.32
THRA-202ENST00000394121 TRIM35Q9UPQ4 493 aa29.53■■■□□ 2.32
THRA-202ENST00000394121 EXOSC9Q06265 439 aaKnown RBP29.52■■■□□ 2.32
THRA-202ENST00000394121 IL16Q14005 1332 aa29.52■■■□□ 2.32
THRA-202ENST00000394121 FBLN1P23142 703 aa29.52■■■□□ 2.32
THRA-202ENST00000394121 SMC4Q9NTJ3 1288 aa29.52■■■□□ 2.32
THRA-202ENST00000394121 TOPAZ1Q8N9V7 1692 aa29.51■■■□□ 2.31
THRA-202ENST00000394121 NGDNQ8NEJ9 315 aaKnown RBP29.49■■■□□ 2.31
THRA-202ENST00000394121 EDC4Q6P2E9 1401 aaKnown RBP29.48■■■□□ 2.31
THRA-202ENST00000394121 TRIM27P14373 513 aa29.48■■■□□ 2.31
THRA-202ENST00000394121 FMN2Q9NZ56 1722 aa29.48■■■□□ 2.31
THRA-202ENST00000394121 DDX19BQ9UMR2 479 aa29.47■■■□□ 2.31
THRA-202ENST00000394121 HDAC1Q13547 482 aaPredicted RBP29.47■■■□□ 2.31
THRA-202ENST00000394121 SSH1Q8WYL5 1049 aa29.47■■■□□ 2.31
THRA-202ENST00000394121 ZNF692Q9BU19 519 aaPredicted RBP29.47■■■□□ 2.31
THRA-202ENST00000394121 ORAI2Q96SN7 254 aa29.46■■■□□ 2.31
THRA-202ENST00000394121 BRPF3Q9ULD4 1205 aa29.46■■■□□ 2.31
THRA-202ENST00000394121 ANKARQ7Z5J8 1434 aa29.45■■■□□ 2.31
THRA-202ENST00000394121 ESCO1Q5FWF5 840 aa29.45■■■□□ 2.31
THRA-202ENST00000394121 ATF7IPQ6VMQ6 1270 aa29.45■■■□□ 2.31
THRA-202ENST00000394121 PNNQ9H307 717 aaKnown RBP29.45■■■□□ 2.3
THRA-202ENST00000394121 C19orf44Q9H6X5 657 aa29.45■■■□□ 2.3
THRA-202ENST00000394121 USP6P35125 1406 aa29.44■■■□□ 2.3
THRA-202ENST00000394121 PNPLA6Q8IY17 1366 aa29.43■■■□□ 2.3
THRA-202ENST00000394121 TTC21BQ7Z4L5 1316 aa29.43■■■□□ 2.3
THRA-202ENST00000394121 ANTXR1Q9H6X2 564 aa29.43■■■□□ 2.3
THRA-202ENST00000394121 DIAPH1O60610 1272 aaKnown RBP29.42■■■□□ 2.3
THRA-202ENST00000394121 RIPK4P57078 832 aa29.42■■■□□ 2.3
THRA-202ENST00000394121 SLKQ9H2G2 1235 aaPredicted RBP29.42■■■□□ 2.3
THRA-202ENST00000394121 RTN4Q9NQC3 1192 aaKnown RBP29.42■■■□□ 2.3
THRA-202ENST00000394121 ITPRIPQ8IWB1 547 aa29.42■■■□□ 2.3
THRA-202ENST00000394121 PHF8Q9UPP1 1060 aa29.41■■■□□ 2.3
THRA-202ENST00000394121 AKAP12Q02952 1782 aa29.41■■■□□ 2.3
THRA-202ENST00000394121 MON2Q7Z3U7 1717 aa29.41■■■□□ 2.3
THRA-202ENST00000394121 ITSN1Q15811 1721 aa29.41■■■□□ 2.3
THRA-202ENST00000394121 TBC1D2Q9BYX2 928 aa29.41■■■□□ 2.3
THRA-202ENST00000394121 NOB1Q9ULX3 412 aaKnown RBP29.41■■■□□ 2.3
THRA-202ENST00000394121 KIF20BQ96Q89 1820 aa29.4■■■□□ 2.3
THRA-202ENST00000394121 KIF16BQ96L93 1317 aa29.38■■■□□ 2.29
THRA-202ENST00000394121 SMC5Q8IY18 1101 aa29.37■■■□□ 2.29
THRA-202ENST00000394121 SSH2Q76I76 1423 aa29.36■■■□□ 2.29
THRA-202ENST00000394121 IPO8O15397 1037 aaKnown RBP29.36■■■□□ 2.29
THRA-202ENST00000394121 XPCQ01831 940 aaPredicted RBP29.36■■■□□ 2.29
THRA-202ENST00000394121 ATF3P18847 181 aa29.35■■■□□ 2.29
THRA-202ENST00000394121 TMEM57Q8N5G2 664 aa29.35■■■□□ 2.29
THRA-202ENST00000394121 FOXO3O43524 673 aa29.34■■■□□ 2.29
THRA-202ENST00000394121 ALDH1L2Q3SY69 923 aa29.34■■■□□ 2.29
THRA-202ENST00000394121 NUTM2GQ5VZR2 741 aa29.34■■■□□ 2.29
THRA-202ENST00000394121 FCHSD2O94868 740 aa29.34■■■□□ 2.29
THRA-202ENST00000394121 ZBTB40Q9NUA8 1239 aa29.34■■■□□ 2.29
THRA-202ENST00000394121 LRRC7Q96NW7 1537 aa29.34■■■□□ 2.29
THRA-202ENST00000394121 NRKQ7Z2Y5 1582 aa29.34■■■□□ 2.29
THRA-202ENST00000394121 COG3Q96JB2 828 aa29.33■■■□□ 2.29
THRA-202ENST00000394121 SOX12O15370 315 aa29.32■■■□□ 2.28
THRA-202ENST00000394121 C22orf23Q9BZE7 217 aa29.32■■■□□ 2.28
THRA-202ENST00000394121 C1orf167Q5SNV9 1468 aa29.31■■■□□ 2.28
THRA-202ENST00000394121 DDX17Q92841 729 aaKnown RBP29.31■■■□□ 2.28
THRA-202ENST00000394121 RRS1Q15050 365 aaKnown RBP29.29■■■□□ 2.28
THRA-202ENST00000394121 POLKQ9UBT6 870 aa29.29■■■□□ 2.28
THRA-202ENST00000394121 EMILIN1Q9Y6C2 1016 aa29.29■■■□□ 2.28
THRA-202ENST00000394121 MST1RQ04912 1400 aa29.28■■■□□ 2.28
THRA-202ENST00000394121 MSH6P52701 1360 aa29.28■■■□□ 2.28
THRA-202ENST00000394121 MFAP1P55081 439 aaKnown RBP29.28■■■□□ 2.28
THRA-202ENST00000394121 PSME1Q06323 249 aa29.28■■■□□ 2.28
THRA-202ENST00000394121 ZNF428Q96B54 188 aa29.28■■■□□ 2.28
THRA-202ENST00000394121 BRPF1P55201 1214 aaPredicted RBP29.27■■■□□ 2.28
THRA-202ENST00000394121 RSPH6AQ9H0K4 717 aa29.27■■■□□ 2.28
THRA-202ENST00000394121 XIRP1Q702N8 1843 aaKnown RBP29.27■■■□□ 2.28
THRA-202ENST00000394121 NCOA3Q9Y6Q9 1424 aa29.26■■■□□ 2.27
THRA-202ENST00000394121 CADPS2Q86UW7 1296 aa29.25■■■□□ 2.27
THRA-202ENST00000394121 OVOS2A0A0J9YW53 1432 aa29.24■■■□□ 2.27
THRA-202ENST00000394121 OVOS2Q6IE36 1432 aa29.24■■■□□ 2.27
THRA-202ENST00000394121 PRKAR2BP31323 418 aa29.24■■■□□ 2.27
THRA-202ENST00000394121 PLEKHG5O94827 1062 aa29.24■■■□□ 2.27
THRA-202ENST00000394121 NUCB1Q02818 461 aa29.24■■■□□ 2.27
THRA-202ENST00000394121 TTC21AQ8NDW8 1320 aa29.24■■■□□ 2.27
THRA-202ENST00000394121 ABTB2Q8N961 1025 aa29.23■■■□□ 2.27
THRA-202ENST00000394121 NLRP6P59044 892 aa29.23■■■□□ 2.27
THRA-202ENST00000394121 DCCP43146 1447 aa29.21■■■□□ 2.27
THRA-202ENST00000394121 MAP2P11137 1827 aaKnown RBP29.2■■■□□ 2.27
THRA-202ENST00000394121 PIK3C2AO00443 1686 aa29.2■■■□□ 2.26
THRA-202ENST00000394121 NFE2L2Q16236 605 aa29.19■■■□□ 2.26
THRA-202ENST00000394121 CALD1Q05682 793 aaKnown RBP29.18■■■□□ 2.26
THRA-202ENST00000394121 CHMP4BQ9H444 224 aaKnown RBP29.18■■■□□ 2.26
THRA-202ENST00000394121 CHMP5Q9NZZ3 219 aa29.18■■■□□ 2.26
THRA-202ENST00000394121 KRT28Q7Z3Y7 464 aa29.17■■■□□ 2.26
THRA-202ENST00000394121 CHD1LQ86WJ1 897 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms