RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 TMEM57Q8N5G2 664 aa17.5■□□□□ 0.39
CCDC142-202ENST00000393965 CDC42BPGQ6DT37 1551 aa17.49■□□□□ 0.39
CCDC142-202ENST00000393965 FCHSD2O94868 740 aa17.49■□□□□ 0.39
CCDC142-202ENST00000393965 USP19O94966 1318 aa17.49■□□□□ 0.39
CCDC142-202ENST00000393965 AKAP12Q02952 1782 aa17.48■□□□□ 0.39
CCDC142-202ENST00000393965 C3P01024 1663 aa17.48■□□□□ 0.39
CCDC142-202ENST00000393965 KNDC1Q76NI1 1749 aa17.48■□□□□ 0.39
CCDC142-202ENST00000393965 VIRMAQ69YN4 1812 aaKnown RBP17.48■□□□□ 0.39
CCDC142-202ENST00000393965 PMFBP1Q8TBY8 1022 aa17.47■□□□□ 0.39
CCDC142-202ENST00000393965 COG3Q96JB2 828 aa17.47■□□□□ 0.39
CCDC142-202ENST00000393965 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
CCDC142-202ENST00000393965 ACEP12821 1306 aa17.46■□□□□ 0.39
CCDC142-202ENST00000393965 RGPD8O14715 1765 aaPredicted RBP17.46■□□□□ 0.39
CCDC142-202ENST00000393965 ATF7IPQ6VMQ6 1270 aa17.46■□□□□ 0.39
CCDC142-202ENST00000393965 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
CCDC142-202ENST00000393965 TECPR2O15040 1411 aa17.45■□□□□ 0.38
CCDC142-202ENST00000393965 KRT24Q2M2I5 525 aa17.44■□□□□ 0.38
CCDC142-202ENST00000393965 MBIPQ9NS73 344 aa17.44■□□□□ 0.38
CCDC142-202ENST00000393965 C1orf115Q9H7X2 142 aa17.44■□□□□ 0.38
CCDC142-202ENST00000393965 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
CCDC142-202ENST00000393965 HSP90AB2PQ58FF8 381 aa17.43■□□□□ 0.38
CCDC142-202ENST00000393965 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
CCDC142-202ENST00000393965 RBM33Q96EV2 1170 aaKnown RBP17.43■□□□□ 0.38
CCDC142-202ENST00000393965 C8orf58Q8NAV2 365 aa17.42■□□□□ 0.38
CCDC142-202ENST00000393965 PEAK1Q9H792 1746 aa17.42■□□□□ 0.38
CCDC142-202ENST00000393965 IL16Q14005 1332 aa17.42■□□□□ 0.38
CCDC142-202ENST00000393965 TTC21BQ7Z4L5 1316 aa17.42■□□□□ 0.38
CCDC142-202ENST00000393965 CDK12Q9NYV4 1490 aaPredicted RBP17.42■□□□□ 0.38
CCDC142-202ENST00000393965 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
CCDC142-202ENST00000393965 VAMP4O75379 141 aa17.41■□□□□ 0.38
CCDC142-202ENST00000393965 RIMS1Q86UR5 1692 aaKnown RBP17.41■□□□□ 0.38
CCDC142-202ENST00000393965 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
CCDC142-202ENST00000393965 MFAP1P55081 439 aaKnown RBP17.4■□□□□ 0.38
CCDC142-202ENST00000393965 SULT6B1Q6IMI4 303 aa17.4■□□□□ 0.38
CCDC142-202ENST00000393965 PLEKHG5O94827 1062 aa17.4■□□□□ 0.38
CCDC142-202ENST00000393965 NRKQ7Z2Y5 1582 aa17.39■□□□□ 0.38
CCDC142-202ENST00000393965 NUTM2GQ5VZR2 741 aa17.39■□□□□ 0.37
CCDC142-202ENST00000393965 RWDD1Q9H446 243 aaPredicted RBP17.39■□□□□ 0.37
CCDC142-202ENST00000393965 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
CCDC142-202ENST00000393965 MCM10Q7L590 875 aa17.38■□□□□ 0.37
CCDC142-202ENST00000393965 TOPAZ1Q8N9V7 1692 aa17.38■□□□□ 0.37
CCDC142-202ENST00000393965 AATKQ6ZMQ8 1374 aa17.38■□□□□ 0.37
CCDC142-202ENST00000393965 PLEKHG1Q9ULL1 1385 aa17.38■□□□□ 0.37
CCDC142-202ENST00000393965 ZBTB40Q9NUA8 1239 aa17.38■□□□□ 0.37
CCDC142-202ENST00000393965 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
CCDC142-202ENST00000393965 FOXO3O43524 673 aa17.37■□□□□ 0.37
CCDC142-202ENST00000393965 MRPL50Q8N5N7 158 aaKnown RBP17.37■□□□□ 0.37
CCDC142-202ENST00000393965 PNNQ9H307 717 aaKnown RBP17.37■□□□□ 0.37
CCDC142-202ENST00000393965 MIS18AQ9NYP9 233 aa17.37■□□□□ 0.37
CCDC142-202ENST00000393965 ZNF853P0CG23 659 aa17.36■□□□□ 0.37
CCDC142-202ENST00000393965 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
CCDC142-202ENST00000393965 DDX19BQ9UMR2 479 aa17.36■□□□□ 0.37
CCDC142-202ENST00000393965 UPF2Q9HAU5 1272 aaKnown RBP17.35■□□□□ 0.37
CCDC142-202ENST00000393965 USP6P35125 1406 aa17.35■□□□□ 0.37
CCDC142-202ENST00000393965 USP35Q9P2H5 1018 aa17.35■□□□□ 0.37
CCDC142-202ENST00000393965 EID1Q9Y6B2 187 aa17.35■□□□□ 0.37
CCDC142-202ENST00000393965 TWISTNBQ3B726 338 aaPredicted RBP17.34■□□□□ 0.37
CCDC142-202ENST00000393965 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
CCDC142-202ENST00000393965 OVOS2A0A0J9YW53 1432 aa17.34■□□□□ 0.37
CCDC142-202ENST00000393965 OVOS2Q6IE36 1432 aa17.34■□□□□ 0.37
CCDC142-202ENST00000393965 FER1L4A9Z1Z3 1794 aa17.34■□□□□ 0.37
CCDC142-202ENST00000393965 LNPKQ9C0E8 428 aa17.33■□□□□ 0.36
CCDC142-202ENST00000393965 KIF16BQ96L93 1317 aa17.33■□□□□ 0.36
CCDC142-202ENST00000393965 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
CCDC142-202ENST00000393965 IFT57Q9NWB7 429 aa17.32■□□□□ 0.36
CCDC142-202ENST00000393965 PLEKHG3A1L390 1219 aa17.32■□□□□ 0.36
CCDC142-202ENST00000393965 MAP3K19Q56UN5 1328 aa17.32■□□□□ 0.36
CCDC142-202ENST00000393965 GNAI1P63096 354 aa17.31■□□□□ 0.36
CCDC142-202ENST00000393965 ZBTB7BO15156 539 aaPredicted RBP17.31■□□□□ 0.36
CCDC142-202ENST00000393965 KCNA6P17658 529 aa17.31■□□□□ 0.36
CCDC142-202ENST00000393965 CFAP44Q96MT7 982 aa17.31■□□□□ 0.36
CCDC142-202ENST00000393965 HDAC1Q13547 482 aaPredicted RBP17.31■□□□□ 0.36
CCDC142-202ENST00000393965 SIRT2Q8IXJ6 389 aa17.31■□□□□ 0.36
CCDC142-202ENST00000393965 NALCNQ8IZF0 1738 aa17.3■□□□□ 0.36
CCDC142-202ENST00000393965 BECN1Q14457 450 aa17.29■□□□□ 0.36
CCDC142-202ENST00000393965 TPRNQ4KMQ1 711 aa17.29■□□□□ 0.36
CCDC142-202ENST00000393965 NGDNQ8NEJ9 315 aaKnown RBP17.29■□□□□ 0.36
CCDC142-202ENST00000393965 APBB1O00213 710 aa17.29■□□□□ 0.36
CCDC142-202ENST00000393965 SSH2Q76I76 1423 aa17.29■□□□□ 0.36
CCDC142-202ENST00000393965 DIP2AQ14689 1571 aa17.29■□□□□ 0.36
CCDC142-202ENST00000393965 IPO8O15397 1037 aaKnown RBP17.28■□□□□ 0.36
CCDC142-202ENST00000393965 SMC5Q8IY18 1101 aa17.28■□□□□ 0.36
CCDC142-202ENST00000393965 HSP90AA1P07900 732 aaKnown RBP17.28■□□□□ 0.36
CCDC142-202ENST00000393965 AAMPQ13685 434 aa17.28■□□□□ 0.36
CCDC142-202ENST00000393965 SETD1BQ9UPS6 1966 aaKnown RBP17.28■□□□□ 0.36
CCDC142-202ENST00000393965 RGPD1P0DJD0 1748 aa17.27■□□□□ 0.35
CCDC142-202ENST00000393965 ARHGAP23Q9P227 1491 aa17.27■□□□□ 0.35
CCDC142-202ENST00000393965 PIK3C2AO00443 1686 aa17.27■□□□□ 0.35
CCDC142-202ENST00000393965 SLIT1O75093 1534 aa17.26■□□□□ 0.35
CCDC142-202ENST00000393965 CEP170BQ9Y4F5 1589 aaPredicted RBP17.26■□□□□ 0.35
CCDC142-202ENST00000393965 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
CCDC142-202ENST00000393965 C14orf37Q86TY3 774 aa17.26■□□□□ 0.35
CCDC142-202ENST00000393965 THEMISQ8N1K5 641 aaPredicted RBP17.25■□□□□ 0.35
CCDC142-202ENST00000393965 PTCH1Q13635 1447 aa17.25■□□□□ 0.35
CCDC142-202ENST00000393965 FMN2Q9NZ56 1722 aa17.25■□□□□ 0.35
CCDC142-202ENST00000393965 TBC1D32Q96NH3 1257 aa17.25■□□□□ 0.35
CCDC142-202ENST00000393965 LTV1Q96GA3 475 aaPredicted RBP17.25■□□□□ 0.35
CCDC142-202ENST00000393965 TBX22Q9Y458 520 aa17.25■□□□□ 0.35
CCDC142-202ENST00000393965 ABCC4O15439 1325 aa17.24■□□□□ 0.35
CCDC142-202ENST00000393965 ANKRD45Q5TZF3 282 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms