RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 ZCRB1Q8TBF4 217 aaKnown RBP10.47□□□□□ -0.73
LIMS1-203ENST00000393310 ST5P78524 1137 aa10.46□□□□□ -0.73
LIMS1-203ENST00000393310 TRAPPC3LQ5T215 181 aa10.46□□□□□ -0.73
LIMS1-203ENST00000393310 EZH2Q15910 746 aaKnown RBP10.46□□□□□ -0.74
LIMS1-203ENST00000393310 STARD3NLO95772 234 aa10.46□□□□□ -0.74
LIMS1-203ENST00000393310 BARGINQ6ZT62 677 aa10.46□□□□□ -0.74
LIMS1-203ENST00000393310 CGNL1Q0VF96 1302 aa10.45□□□□□ -0.74
LIMS1-203ENST00000393310 ARHGEF5Q12774 1597 aa10.45□□□□□ -0.74
LIMS1-203ENST00000393310 CFAP70Q5T0N1 1121 aa10.45□□□□□ -0.74
LIMS1-203ENST00000393310 TEX13AQ9BXU3 409 aaPredicted RBP10.45□□□□□ -0.74
LIMS1-203ENST00000393310 NAIPQ13075 1403 aa10.45□□□□□ -0.74
LIMS1-203ENST00000393310 RALGAPBQ86X10 1494 aa10.45□□□□□ -0.74
LIMS1-203ENST00000393310 EIF6P56537 245 aaKnown RBP10.45□□□□□ -0.74
LIMS1-203ENST00000393310 ACSBG1Q96GR2 724 aa10.44□□□□□ -0.74
LIMS1-203ENST00000393310 CWC22Q9HCG8 908 aaKnown RBP10.44□□□□□ -0.74
LIMS1-203ENST00000393310 GCP02774 474 aa10.44□□□□□ -0.74
LIMS1-203ENST00000393310 TXNRD1Q16881 649 aa10.44□□□□□ -0.74
LIMS1-203ENST00000393310 ABCC5O15440 1437 aa10.44□□□□□ -0.74
LIMS1-203ENST00000393310 RBM10P98175 930 aaKnown RBP10.44□□□□□ -0.74
LIMS1-203ENST00000393310 C1QTNF8P60827 252 aa10.44□□□□□ -0.74
LIMS1-203ENST00000393310 OVOS2A0A0G2JMS6 1433 aa10.44□□□□□ -0.74
LIMS1-203ENST00000393310 OVOS2A0A0J9YW53 1432 aa10.44□□□□□ -0.74
LIMS1-203ENST00000393310 TNS3Q68CZ2 1445 aa10.44□□□□□ -0.74
LIMS1-203ENST00000393310 OVOS2Q6IE36 1432 aa10.44□□□□□ -0.74
LIMS1-203ENST00000393310 SLC15A2Q16348 729 aa10.43□□□□□ -0.74
LIMS1-203ENST00000393310 SMC1BQ8NDV3 1235 aa10.43□□□□□ -0.74
LIMS1-203ENST00000393310 ABCC11Q96J66 1382 aa10.43□□□□□ -0.74
LIMS1-203ENST00000393310 DDX17Q92841 729 aaKnown RBP10.43□□□□□ -0.74
LIMS1-203ENST00000393310 GRM1Q13255 1194 aa10.43□□□□□ -0.74
LIMS1-203ENST00000393310 C1orf167Q5SNV9 1468 aa10.43□□□□□ -0.74
LIMS1-203ENST00000393310 ROCK2O75116 1388 aaKnown RBP10.43□□□□□ -0.74
LIMS1-203ENST00000393310 C14orf93Q9H972 538 aaKnown RBP10.42□□□□□ -0.74
LIMS1-203ENST00000393310 HDAC9Q9UKV0 1011 aa10.42□□□□□ -0.74
LIMS1-203ENST00000393310 ZNF622Q969S3 477 aaKnown RBP eCLIP10.42□□□□□ -0.74
LIMS1-203ENST00000393310 DIP2AQ14689 1571 aa10.42□□□□□ -0.74
LIMS1-203ENST00000393310 RICTORQ6R327 1708 aa10.42□□□□□ -0.74
LIMS1-203ENST00000393310 MAP3K1Q13233 1512 aa10.42□□□□□ -0.74
LIMS1-203ENST00000393310 IRX6P78412 446 aaPredicted RBP10.42□□□□□ -0.74
LIMS1-203ENST00000393310 NOS1P29475 1434 aa10.42□□□□□ -0.74
LIMS1-203ENST00000393310 HSP90AA2PQ14568 343 aaPredicted RBP10.42□□□□□ -0.74
LIMS1-203ENST00000393310 H0YIN7 160 aa10.41□□□□□ -0.74
LIMS1-203ENST00000393310 MAPK8IP3Q9UPT6 1336 aa10.41□□□□□ -0.74
LIMS1-203ENST00000393310 DALRD3Q5D0E6 543 aaKnown RBP10.41□□□□□ -0.74
LIMS1-203ENST00000393310 MORC1Q86VD1 984 aa10.41□□□□□ -0.74
LIMS1-203ENST00000393310 CARD10Q9BWT7 1032 aa10.41□□□□□ -0.74
LIMS1-203ENST00000393310 IQGAP1P46940 1657 aa10.41□□□□□ -0.74
LIMS1-203ENST00000393310 PHF14O94880 888 aa10.41□□□□□ -0.74
LIMS1-203ENST00000393310 PIK3C2GO75747 1445 aa10.4□□□□□ -0.74
LIMS1-203ENST00000393310 PDE6BP35913 854 aa10.4□□□□□ -0.74
LIMS1-203ENST00000393310 PLCD4Q9BRC7 762 aa10.4□□□□□ -0.74
LIMS1-203ENST00000393310 PLSCR1O15162 318 aa10.4□□□□□ -0.74
LIMS1-203ENST00000393310 ZMYND15Q9H091 742 aa10.4□□□□□ -0.74
LIMS1-203ENST00000393310 LAS1LQ9Y4W2 734 aaKnown RBP10.4□□□□□ -0.74
LIMS1-203ENST00000393310 ADGRB3O60242 1522 aa10.4□□□□□ -0.75
LIMS1-203ENST00000393310 AMOTQ4VCS5 1084 aa10.4□□□□□ -0.75
LIMS1-203ENST00000393310 BCL2L13Q9BXK5 485 aa10.4□□□□□ -0.75
LIMS1-203ENST00000393310 ABT1Q9ULW3 272 aaKnown RBP10.4□□□□□ -0.75
LIMS1-203ENST00000393310 CD2APQ9Y5K6 639 aa10.4□□□□□ -0.75
LIMS1-203ENST00000393310 ADGRB2O60241 1585 aa10.39□□□□□ -0.75
LIMS1-203ENST00000393310 KTN1Q86UP2 1357 aaKnown RBP10.39□□□□□ -0.75
LIMS1-203ENST00000393310 ACEP12821 1306 aa10.39□□□□□ -0.75
LIMS1-203ENST00000393310 CLSTN1O94985 981 aa10.39□□□□□ -0.75
LIMS1-203ENST00000393310 HSP90AA1P07900 732 aaKnown RBP10.39□□□□□ -0.75
LIMS1-203ENST00000393310 MPRIPQ6WCQ1 1025 aa10.39□□□□□ -0.75
LIMS1-203ENST00000393310 ZC3H13Q5T200 1668 aaKnown RBP10.39□□□□□ -0.75
LIMS1-203ENST00000393310 ABCA6Q8N139 1617 aa10.39□□□□□ -0.75
LIMS1-203ENST00000393310 SPATA31A5Q5VU36 1347 aa10.39□□□□□ -0.75
LIMS1-203ENST00000393310 SPATA31A7Q8IWB4 1347 aa10.39□□□□□ -0.75
LIMS1-203ENST00000393310 PIM2Q9P1W9 311 aa10.39□□□□□ -0.75
LIMS1-203ENST00000393310 ANKARQ7Z5J8 1434 aa10.39□□□□□ -0.75
LIMS1-203ENST00000393310 TTLL12Q14166 644 aaPredicted RBP10.39□□□□□ -0.75
LIMS1-203ENST00000393310 IL27Q8NEV9 243 aa10.39□□□□□ -0.75
LIMS1-203ENST00000393310 DNMT1P26358 1616 aaKnown RBP10.39□□□□□ -0.75
LIMS1-203ENST00000393310 ANKRD24Q8TF21 1146 aa10.38□□□□□ -0.75
LIMS1-203ENST00000393310 TIAM1Q13009 1591 aa10.38□□□□□ -0.75
LIMS1-203ENST00000393310 SUPT20HQ8NEM7 779 aa10.38□□□□□ -0.75
LIMS1-203ENST00000393310 GCC1Q96CN9 775 aa10.38□□□□□ -0.75
LIMS1-203ENST00000393310 PPRC1Q5VV67 1664 aaKnown RBP10.38□□□□□ -0.75
LIMS1-203ENST00000393310 C3P01024 1663 aa10.38□□□□□ -0.75
LIMS1-203ENST00000393310 IFNL2Q8IZJ0 200 aa10.37□□□□□ -0.75
LIMS1-203ENST00000393310 CNKSR1Q969H4 720 aa10.37□□□□□ -0.75
LIMS1-203ENST00000393310 BICDL1Q6ZP65 573 aa10.37□□□□□ -0.75
LIMS1-203ENST00000393310 OTUD7BQ6GQQ9 843 aa10.37□□□□□ -0.75
LIMS1-203ENST00000393310 CCAR1Q8IX12 1150 aaKnown RBP10.37□□□□□ -0.75
LIMS1-203ENST00000393310 KIF6Q6ZMV9 814 aa10.36□□□□□ -0.75
LIMS1-203ENST00000393310 FOXD4L1Q9NU39 408 aa10.36□□□□□ -0.75
LIMS1-203ENST00000393310 CABP1Q9NZU7 370 aa10.36□□□□□ -0.75
LIMS1-203ENST00000393310 ZBTB47Q9UFB7 747 aaPredicted RBP10.36□□□□□ -0.75
LIMS1-203ENST00000393310 FRMPD1Q5SYB0 1578 aa10.36□□□□□ -0.75
LIMS1-203ENST00000393310 ATP6V1AP38606 617 aa10.36□□□□□ -0.75
LIMS1-203ENST00000393310 PCDH11XQ9BZA7 1347 aa10.36□□□□□ -0.75
LIMS1-203ENST00000393310 PCDH11YQ9BZA8 1340 aa10.36□□□□□ -0.75
LIMS1-203ENST00000393310 DEPDC5O75140 1603 aa10.36□□□□□ -0.75
LIMS1-203ENST00000393310 SLIT1O75093 1534 aa10.36□□□□□ -0.75
LIMS1-203ENST00000393310 GNPATO15228 680 aa10.35□□□□□ -0.75
LIMS1-203ENST00000393310 VEGFAP15692 232 aaPredicted RBP10.35□□□□□ -0.75
LIMS1-203ENST00000393310 FHDC1Q9C0D6 1143 aaPredicted RBP10.35□□□□□ -0.75
LIMS1-203ENST00000393310 MBD5Q9P267 1494 aa10.35□□□□□ -0.75
LIMS1-203ENST00000393310 HSPA6P17066 643 aa10.35□□□□□ -0.75
LIMS1-203ENST00000393310 GRIPAP1Q4V328 841 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms