RNA–Protein interactions for RNA: ENST00000392645.6

ATXN2-204, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 2,842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-204ENST00000392645 DAXXQ9UER7 740 aaPredicted RBP18.34■□□□□ 0.53
ATXN2-204ENST00000392645 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
ATXN2-204ENST00000392645 LNPKQ9C0E8 428 aa18.33■□□□□ 0.53
ATXN2-204ENST00000392645 SETD1AO15047 1707 aaKnown RBP18.33■□□□□ 0.53
ATXN2-204ENST00000392645 SETD1BQ9UPS6 1966 aaKnown RBP18.33■□□□□ 0.52
ATXN2-204ENST00000392645 PNPLA6Q8IY17 1366 aa18.33■□□□□ 0.52
ATXN2-204ENST00000392645 CPSF1Q10570 1443 aaKnown RBP18.33■□□□□ 0.52
ATXN2-204ENST00000392645 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
ATXN2-204ENST00000392645 KIF20BQ96Q89 1820 aa18.32■□□□□ 0.52
ATXN2-204ENST00000392645 DEKP35659 375 aaKnown RBP18.32■□□□□ 0.52
ATXN2-204ENST00000392645 NLRP6P59044 892 aa18.32■□□□□ 0.52
ATXN2-204ENST00000392645 ZNF428Q96B54 188 aa18.32■□□□□ 0.52
ATXN2-204ENST00000392645 TWISTNBQ3B726 338 aaPredicted RBP18.31■□□□□ 0.52
ATXN2-204ENST00000392645 ATP7BP35670 1465 aa18.31■□□□□ 0.52
ATXN2-204ENST00000392645 VAMP4O75379 141 aa18.3■□□□□ 0.52
ATXN2-204ENST00000392645 AMPHP49418 695 aa18.3■□□□□ 0.52
ATXN2-204ENST00000392645 RTL5Q5HYW3 569 aaPredicted RBP18.3■□□□□ 0.52
ATXN2-204ENST00000392645 SLKQ9H2G2 1235 aaPredicted RBP18.3■□□□□ 0.52
ATXN2-204ENST00000392645 RWDD1Q9H446 243 aaPredicted RBP18.29■□□□□ 0.52
ATXN2-204ENST00000392645 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.29■□□□□ 0.52
ATXN2-204ENST00000392645 MAP3K19Q56UN5 1328 aa18.29■□□□□ 0.52
ATXN2-204ENST00000392645 FAM135BQ49AJ0 1406 aa18.28■□□□□ 0.52
ATXN2-204ENST00000392645 ADGRB2O60241 1585 aa18.28■□□□□ 0.52
ATXN2-204ENST00000392645 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
ATXN2-204ENST00000392645 PRKCSHP14314 528 aaPredicted RBP18.27■□□□□ 0.52
ATXN2-204ENST00000392645 UBR1Q8IWV7 1749 aa18.27■□□□□ 0.52
ATXN2-204ENST00000392645 ABTB2Q8N961 1025 aa18.26■□□□□ 0.51
ATXN2-204ENST00000392645 ZNF692Q9BU19 519 aaPredicted RBP18.26■□□□□ 0.51
ATXN2-204ENST00000392645 PNNQ9H307 717 aaKnown RBP18.25■□□□□ 0.51
ATXN2-204ENST00000392645 MED14O60244 1454 aa18.25■□□□□ 0.51
ATXN2-204ENST00000392645 REREQ9P2R6 1566 aa18.25■□□□□ 0.51
ATXN2-204ENST00000392645 DLC1Q96QB1 1528 aa18.25■□□□□ 0.51
ATXN2-204ENST00000392645 DDX19BQ9UMR2 479 aa18.24■□□□□ 0.51
ATXN2-204ENST00000392645 USP19O94966 1318 aa18.24■□□□□ 0.51
ATXN2-204ENST00000392645 SLC4A10Q6U841 1118 aa18.24■□□□□ 0.51
ATXN2-204ENST00000392645 THEMISQ8N1K5 641 aaPredicted RBP18.24■□□□□ 0.51
ATXN2-204ENST00000392645 RGPD8O14715 1765 aaPredicted RBP18.24■□□□□ 0.51
ATXN2-204ENST00000392645 MTHFSDQ2M296 383 aaKnown RBP18.23■□□□□ 0.51
ATXN2-204ENST00000392645 ANKRD45Q5TZF3 282 aa18.23■□□□□ 0.51
ATXN2-204ENST00000392645 MRPL50Q8N5N7 158 aaKnown RBP18.23■□□□□ 0.51
ATXN2-204ENST00000392645 F6X3S4 739 aa18.23■□□□□ 0.51
ATXN2-204ENST00000392645 GNAI1P63096 354 aa18.23■□□□□ 0.51
ATXN2-204ENST00000392645 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
ATXN2-204ENST00000392645 ZBTB40Q9NUA8 1239 aa18.22■□□□□ 0.51
ATXN2-204ENST00000392645 PLEKHG1Q9ULL1 1385 aa18.21■□□□□ 0.51
ATXN2-204ENST00000392645 RIMS1Q86UR5 1692 aaKnown RBP18.21■□□□□ 0.51
ATXN2-204ENST00000392645 ESCO1Q5FWF5 840 aa18.21■□□□□ 0.51
ATXN2-204ENST00000392645 EYA1Q99502 592 aa18.21■□□□□ 0.51
ATXN2-204ENST00000392645 CDC42BPGQ6DT37 1551 aa18.21■□□□□ 0.51
ATXN2-204ENST00000392645 USP6P35125 1406 aa18.2■□□□□ 0.5
ATXN2-204ENST00000392645 IPO8O15397 1037 aaKnown RBP18.2■□□□□ 0.5
ATXN2-204ENST00000392645 CFAP44Q96MT7 982 aa18.2■□□□□ 0.5
ATXN2-204ENST00000392645 G2E3Q7L622 706 aa18.19■□□□□ 0.5
ATXN2-204ENST00000392645 DDX17Q92841 729 aaKnown RBP18.19■□□□□ 0.5
ATXN2-204ENST00000392645 KIF16BQ96L93 1317 aa18.19■□□□□ 0.5
ATXN2-204ENST00000392645 IFT57Q9NWB7 429 aa18.19■□□□□ 0.5
ATXN2-204ENST00000392645 IL16Q14005 1332 aa18.18■□□□□ 0.5
ATXN2-204ENST00000392645 PLEKHG3A1L390 1219 aa18.18■□□□□ 0.5
ATXN2-204ENST00000392645 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
ATXN2-204ENST00000392645 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
ATXN2-204ENST00000392645 ARXQ96QS3 562 aa18.18■□□□□ 0.5
ATXN2-204ENST00000392645 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
ATXN2-204ENST00000392645 ORAI2Q96SN7 254 aa18.17■□□□□ 0.5
ATXN2-204ENST00000392645 C3P01024 1663 aa18.17■□□□□ 0.5
ATXN2-204ENST00000392645 ZBTB7BO15156 539 aaPredicted RBP18.17■□□□□ 0.5
ATXN2-204ENST00000392645 FRAT2O75474 233 aaPredicted RBP18.17■□□□□ 0.5
ATXN2-204ENST00000392645 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
ATXN2-204ENST00000392645 LRRC59Q96AG4 307 aaKnown RBP18.17■□□□□ 0.5
ATXN2-204ENST00000392645 DDRGK1Q96HY6 314 aa18.17■□□□□ 0.5
ATXN2-204ENST00000392645 TSPYL4Q9UJ04 414 aa18.17■□□□□ 0.5
ATXN2-204ENST00000392645 SMARCA5O60264 1052 aaPredicted RBP18.16■□□□□ 0.5
ATXN2-204ENST00000392645 ZNF853P0CG23 659 aa18.16■□□□□ 0.5
ATXN2-204ENST00000392645 CDK12Q9NYV4 1490 aaPredicted RBP18.16■□□□□ 0.5
ATXN2-204ENST00000392645 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
ATXN2-204ENST00000392645 TBX22Q9Y458 520 aa18.15■□□□□ 0.5
ATXN2-204ENST00000392645 TECPR2O15040 1411 aa18.15■□□□□ 0.5
ATXN2-204ENST00000392645 ITSN1Q15811 1721 aa18.15■□□□□ 0.5
ATXN2-204ENST00000392645 NFKBIBQ15653 356 aa18.14■□□□□ 0.5
ATXN2-204ENST00000392645 OTUD7AQ8TE49 926 aaPredicted RBP18.14■□□□□ 0.5
ATXN2-204ENST00000392645 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
ATXN2-204ENST00000392645 PSME1Q06323 249 aa18.13■□□□□ 0.49
ATXN2-204ENST00000392645 AATKQ6ZMQ8 1374 aa18.13■□□□□ 0.49
ATXN2-204ENST00000392645 PEAK1Q9H792 1746 aa18.13■□□□□ 0.49
ATXN2-204ENST00000392645 ALDH1L2Q3SY69 923 aa18.13■□□□□ 0.49
ATXN2-204ENST00000392645 ANXA1P04083 346 aa18.12■□□□□ 0.49
ATXN2-204ENST00000392645 CT47B1P0C2W7 299 aaPredicted RBP18.12■□□□□ 0.49
ATXN2-204ENST00000392645 TSHZ3Q63HK5 1081 aa18.12■□□□□ 0.49
ATXN2-204ENST00000392645 MEIS3Q99687 375 aa18.12■□□□□ 0.49
ATXN2-204ENST00000392645 OVOS2A0A0J9YW53 1432 aa18.11■□□□□ 0.49
ATXN2-204ENST00000392645 OVOS2Q6IE36 1432 aa18.11■□□□□ 0.49
ATXN2-204ENST00000392645 MON2Q7Z3U7 1717 aa18.11■□□□□ 0.49
ATXN2-204ENST00000392645 CHD1LQ86WJ1 897 aa18.11■□□□□ 0.49
ATXN2-204ENST00000392645 FER1L4A9Z1Z3 1794 aa18.1■□□□□ 0.49
ATXN2-204ENST00000392645 EIF2S2P20042 333 aaKnown RBP18.1■□□□□ 0.49
ATXN2-204ENST00000392645 SIRT1Q96EB6 747 aa18.1■□□□□ 0.49
ATXN2-204ENST00000392645 HOXC9P31274 260 aa18.1■□□□□ 0.49
ATXN2-204ENST00000392645 CALD1Q05682 793 aaKnown RBP18.1■□□□□ 0.49
ATXN2-204ENST00000392645 LMOD3Q0VAK6 560 aa18.1■□□□□ 0.49
ATXN2-204ENST00000392645 PHF8Q9UPP1 1060 aa18.1■□□□□ 0.49
ATXN2-204ENST00000392645 UPF2Q9HAU5 1272 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms