RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 TERF2IPQ9NYB0 399 aa17.69■□□□□ 0.42
NEK4-202ENST00000383721 CT47B1P0C2W7 299 aaPredicted RBP17.68■□□□□ 0.42
NEK4-202ENST00000383721 RWDD1Q9H446 243 aaPredicted RBP17.68■□□□□ 0.42
NEK4-202ENST00000383721 RGPD8O14715 1765 aaPredicted RBP17.67■□□□□ 0.42
NEK4-202ENST00000383721 EXOSC9Q06265 439 aaKnown RBP17.67■□□□□ 0.42
NEK4-202ENST00000383721 DZIP1LQ8IYY4 767 aaKnown RBP17.67■□□□□ 0.42
NEK4-202ENST00000383721 CADPS2Q86UW7 1296 aa17.66■□□□□ 0.42
NEK4-202ENST00000383721 CABP1Q9NZU7 370 aa17.66■□□□□ 0.42
NEK4-202ENST00000383721 DCCP43146 1447 aa17.66■□□□□ 0.42
NEK4-202ENST00000383721 MST1RQ04912 1400 aa17.66■□□□□ 0.42
NEK4-202ENST00000383721 ORAI2Q96SN7 254 aa17.66■□□□□ 0.42
NEK4-202ENST00000383721 GSE1Q14687 1217 aa17.65■□□□□ 0.42
NEK4-202ENST00000383721 FTSJ3Q8IY81 847 aaKnown RBP17.65■□□□□ 0.42
NEK4-202ENST00000383721 CERKQ8TCT0 537 aa17.65■□□□□ 0.42
NEK4-202ENST00000383721 SMC4Q9NTJ3 1288 aa17.65■□□□□ 0.42
NEK4-202ENST00000383721 C1orf167Q5SNV9 1468 aa17.64■□□□□ 0.41
NEK4-202ENST00000383721 SSH1Q8WYL5 1049 aa17.64■□□□□ 0.41
NEK4-202ENST00000383721 CCDC61Q9Y6R9 512 aa17.64■□□□□ 0.41
NEK4-202ENST00000383721 PPIP5K1Q6PFW1 1433 aa17.64■□□□□ 0.41
NEK4-202ENST00000383721 ESCO1Q5FWF5 840 aa17.64■□□□□ 0.41
NEK4-202ENST00000383721 FRAT2O75474 233 aaPredicted RBP17.63■□□□□ 0.41
NEK4-202ENST00000383721 TRIM27P14373 513 aa17.63■□□□□ 0.41
NEK4-202ENST00000383721 SLAIN2Q9P270 581 aa17.63■□□□□ 0.41
NEK4-202ENST00000383721 PNPLA6Q8IY17 1366 aa17.63■□□□□ 0.41
NEK4-202ENST00000383721 IL16Q14005 1332 aa17.63■□□□□ 0.41
NEK4-202ENST00000383721 DIAPH1O60610 1272 aaKnown RBP17.62■□□□□ 0.41
NEK4-202ENST00000383721 HDGFL2Q7Z4V5 671 aaPredicted RBP17.62■□□□□ 0.41
NEK4-202ENST00000383721 ANKARQ7Z5J8 1434 aa17.62■□□□□ 0.41
NEK4-202ENST00000383721 RIPK4P57078 832 aa17.62■□□□□ 0.41
NEK4-202ENST00000383721 TOPAZ1Q8N9V7 1692 aa17.61■□□□□ 0.41
NEK4-202ENST00000383721 ANKRD26Q9UPS8 1709 aa17.61■□□□□ 0.41
NEK4-202ENST00000383721 ATF7IPQ6VMQ6 1270 aa17.6■□□□□ 0.41
NEK4-202ENST00000383721 IL27Q8NEV9 243 aa17.6■□□□□ 0.41
NEK4-202ENST00000383721 DDX17Q92841 729 aaKnown RBP17.6■□□□□ 0.41
NEK4-202ENST00000383721 TBC1D32Q96NH3 1257 aa17.59■□□□□ 0.41
NEK4-202ENST00000383721 NOB1Q9ULX3 412 aaKnown RBP17.59■□□□□ 0.41
NEK4-202ENST00000383721 PHF8Q9UPP1 1060 aa17.59■□□□□ 0.41
NEK4-202ENST00000383721 BECN1Q14457 450 aa17.59■□□□□ 0.41
NEK4-202ENST00000383721 BRINP3Q76B58 766 aa17.58■□□□□ 0.41
NEK4-202ENST00000383721 ACEP12821 1306 aa17.58■□□□□ 0.41
NEK4-202ENST00000383721 UBAP1LF5GYI3 381 aa17.58■□□□□ 0.4
NEK4-202ENST00000383721 HDAC1Q13547 482 aaPredicted RBP17.58■□□□□ 0.4
NEK4-202ENST00000383721 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.4
NEK4-202ENST00000383721 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.4
NEK4-202ENST00000383721 PLEKHG3A1L390 1219 aa17.57■□□□□ 0.4
NEK4-202ENST00000383721 FOXO3O43524 673 aa17.57■□□□□ 0.4
NEK4-202ENST00000383721 XPCQ01831 940 aaPredicted RBP17.57■□□□□ 0.4
NEK4-202ENST00000383721 UPF2Q9HAU5 1272 aaKnown RBP17.57■□□□□ 0.4
NEK4-202ENST00000383721 PIP4K2BP78356 416 aa17.57■□□□□ 0.4
NEK4-202ENST00000383721 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
NEK4-202ENST00000383721 ITSN1Q15811 1721 aa17.56■□□□□ 0.4
NEK4-202ENST00000383721 NGDNQ8NEJ9 315 aaKnown RBP17.56■□□□□ 0.4
NEK4-202ENST00000383721 FCHSD2O94868 740 aa17.56■□□□□ 0.4
NEK4-202ENST00000383721 FBLN1P23142 703 aa17.56■□□□□ 0.4
NEK4-202ENST00000383721 TMEM57Q8N5G2 664 aa17.56■□□□□ 0.4
NEK4-202ENST00000383721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.55■□□□□ 0.4
NEK4-202ENST00000383721 POLKQ9UBT6 870 aa17.55■□□□□ 0.4
NEK4-202ENST00000383721 TOM1O60784 492 aa17.54■□□□□ 0.4
NEK4-202ENST00000383721 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
NEK4-202ENST00000383721 ZBTB40Q9NUA8 1239 aa17.54■□□□□ 0.4
NEK4-202ENST00000383721 CPSF1Q10570 1443 aaKnown RBP17.53■□□□□ 0.4
NEK4-202ENST00000383721 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
NEK4-202ENST00000383721 KIF16BQ96L93 1317 aa17.53■□□□□ 0.4
NEK4-202ENST00000383721 SMC5Q8IY18 1101 aa17.53■□□□□ 0.4
NEK4-202ENST00000383721 SLKQ9H2G2 1235 aaPredicted RBP17.53■□□□□ 0.4
NEK4-202ENST00000383721 TBC1D2Q9BYX2 928 aa17.52■□□□□ 0.4
NEK4-202ENST00000383721 ANTXR1Q9H6X2 564 aa17.52■□□□□ 0.4
NEK4-202ENST00000383721 ROBO1Q9Y6N7 1651 aa17.52■□□□□ 0.39
NEK4-202ENST00000383721 ALDH1L2Q3SY69 923 aa17.52■□□□□ 0.39
NEK4-202ENST00000383721 KIF20BQ96Q89 1820 aa17.52■□□□□ 0.39
NEK4-202ENST00000383721 IPO8O15397 1037 aaKnown RBP17.51■□□□□ 0.39
NEK4-202ENST00000383721 PHACTR3Q96KR7 559 aa17.5■□□□□ 0.39
NEK4-202ENST00000383721 PSME1Q06323 249 aa17.5■□□□□ 0.39
NEK4-202ENST00000383721 AKAP12Q02952 1782 aa17.5■□□□□ 0.39
NEK4-202ENST00000383721 USP6P35125 1406 aa17.5■□□□□ 0.39
NEK4-202ENST00000383721 BRPF3Q9ULD4 1205 aa17.49■□□□□ 0.39
NEK4-202ENST00000383721 KIF1AQ12756 1690 aa17.49■□□□□ 0.39
NEK4-202ENST00000383721 HMOX1P09601 288 aa17.48■□□□□ 0.39
NEK4-202ENST00000383721 NFE2L2Q16236 605 aa17.48■□□□□ 0.39
NEK4-202ENST00000383721 KRT28Q7Z3Y7 464 aa17.47■□□□□ 0.39
NEK4-202ENST00000383721 THUMPD2Q9BTF0 503 aaKnown RBP17.47■□□□□ 0.39
NEK4-202ENST00000383721 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
NEK4-202ENST00000383721 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
NEK4-202ENST00000383721 MON2Q7Z3U7 1717 aa17.47■□□□□ 0.39
NEK4-202ENST00000383721 BRPF1P55201 1214 aaPredicted RBP17.47■□□□□ 0.39
NEK4-202ENST00000383721 C22orf23Q9BZE7 217 aa17.47■□□□□ 0.39
NEK4-202ENST00000383721 MFAP1P55081 439 aaKnown RBP17.46■□□□□ 0.39
NEK4-202ENST00000383721 NPHP3Q7Z494 1330 aa17.46■□□□□ 0.39
NEK4-202ENST00000383721 SSH2Q76I76 1423 aa17.46■□□□□ 0.39
NEK4-202ENST00000383721 ZNF428Q96B54 188 aa17.46■□□□□ 0.39
NEK4-202ENST00000383721 RTN4Q9NQC3 1192 aaKnown RBP17.46■□□□□ 0.39
NEK4-202ENST00000383721 ZRANB1Q9UGI0 708 aa17.46■□□□□ 0.39
NEK4-202ENST00000383721 PXDNQ92626 1479 aa17.45■□□□□ 0.38
NEK4-202ENST00000383721 IL13P35225 146 aa17.45■□□□□ 0.38
NEK4-202ENST00000383721 NUCB1Q02818 461 aa17.45■□□□□ 0.38
NEK4-202ENST00000383721 NME9Q86XW9 330 aa17.45■□□□□ 0.38
NEK4-202ENST00000383721 TTC21BQ7Z4L5 1316 aa17.45■□□□□ 0.38
NEK4-202ENST00000383721 NRKQ7Z2Y5 1582 aa17.45■□□□□ 0.38
NEK4-202ENST00000383721 EDC4Q6P2E9 1401 aaKnown RBP17.45■□□□□ 0.38
NEK4-202ENST00000383721 VAMP4O75379 141 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms