RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 CHD1LQ86WJ1 897 aa15.49■□□□□ 0.07
CDX2-201ENST00000381020 CHMP4AQ9BY43 222 aa15.49■□□□□ 0.07
CDX2-201ENST00000381020 TAOK2Q9UL54 1235 aa15.49■□□□□ 0.07
CDX2-201ENST00000381020 KIF1BO60333 1816 aa15.49■□□□□ 0.07
CDX2-201ENST00000381020 NFKBIBQ15653 356 aa15.49■□□□□ 0.07
CDX2-201ENST00000381020 ALDH1L2Q3SY69 923 aa15.48■□□□□ 0.07
CDX2-201ENST00000381020 KDM5AP29375 1690 aaKnown RBP15.48■□□□□ 0.07
CDX2-201ENST00000381020 MCCP23508 829 aa15.48■□□□□ 0.07
CDX2-201ENST00000381020 RNF17Q9BXT8 1623 aaKnown RBP15.48■□□□□ 0.07
CDX2-201ENST00000381020 KIAA1211Q6ZU35 1233 aa15.48■□□□□ 0.07
CDX2-201ENST00000381020 ZNF521Q96K83 1311 aa15.47■□□□□ 0.07
CDX2-201ENST00000381020 FOXD4L5Q5VV16 416 aaPredicted RBP15.47■□□□□ 0.07
CDX2-201ENST00000381020 FOXD4L4Q8WXT5 416 aaPredicted RBP15.47■□□□□ 0.07
CDX2-201ENST00000381020 SPHKAPQ2M3C7 1700 aa15.47■□□□□ 0.07
CDX2-201ENST00000381020 GNAT3A8MTJ3 354 aa15.47■□□□□ 0.07
CDX2-201ENST00000381020 UBTFL1P0CB47 393 aaPredicted RBP15.47■□□□□ 0.07
CDX2-201ENST00000381020 PLEKHO1Q53GL0 409 aaPredicted RBP15.46■□□□□ 0.07
CDX2-201ENST00000381020 EVA1CP58658 441 aa15.46■□□□□ 0.07
CDX2-201ENST00000381020 TTC5Q8N0Z6 440 aa15.46■□□□□ 0.07
CDX2-201ENST00000381020 GCC1Q96CN9 775 aa15.46■□□□□ 0.06
CDX2-201ENST00000381020 IL16Q14005 1332 aa15.45■□□□□ 0.06
CDX2-201ENST00000381020 MAP3K4Q9Y6R4 1608 aa15.45■□□□□ 0.06
CDX2-201ENST00000381020 CFAP74Q9C0B2 1584 aa15.45■□□□□ 0.06
CDX2-201ENST00000381020 IL13P35225 146 aa15.45■□□□□ 0.06
CDX2-201ENST00000381020 TMEM2Q9UHN6 1383 aa15.45■□□□□ 0.06
CDX2-201ENST00000381020 MADDQ8WXG6 1647 aa15.45■□□□□ 0.06
CDX2-201ENST00000381020 MAP3K19Q56UN5 1328 aa15.45■□□□□ 0.06
CDX2-201ENST00000381020 VAMP4O75379 141 aa15.45■□□□□ 0.06
CDX2-201ENST00000381020 FRAT2O75474 233 aaPredicted RBP15.45■□□□□ 0.06
CDX2-201ENST00000381020 MPRIPQ6WCQ1 1025 aa15.44■□□□□ 0.06
CDX2-201ENST00000381020 SYNMO15061 1565 aa15.44■□□□□ 0.06
CDX2-201ENST00000381020 SMARCA5O60264 1052 aaPredicted RBP15.44■□□□□ 0.06
CDX2-201ENST00000381020 SURF6O75683 361 aaKnown RBP15.44■□□□□ 0.06
CDX2-201ENST00000381020 FGD1P98174 961 aa15.44■□□□□ 0.06
CDX2-201ENST00000381020 EXOC6BQ9Y2D4 811 aa15.44■□□□□ 0.06
CDX2-201ENST00000381020 TBX22Q9Y458 520 aa15.43■□□□□ 0.06
CDX2-201ENST00000381020 NAP1L2Q9ULW6 460 aaPredicted RBP15.43■□□□□ 0.06
CDX2-201ENST00000381020 GNAI2P04899 355 aa15.43■□□□□ 0.06
CDX2-201ENST00000381020 MTHFSDQ2M296 383 aaKnown RBP15.43■□□□□ 0.06
CDX2-201ENST00000381020 ANO2Q9NQ90 1003 aa15.43■□□□□ 0.06
CDX2-201ENST00000381020 GNAI3P08754 354 aa15.42■□□□□ 0.06
CDX2-201ENST00000381020 C8orf34Q49A92 452 aa15.42■□□□□ 0.06
CDX2-201ENST00000381020 TRMT2AQ8IZ69 625 aaKnown RBP15.42■□□□□ 0.06
CDX2-201ENST00000381020 EYA1Q99502 592 aa15.42■□□□□ 0.06
CDX2-201ENST00000381020 CEP152O94986 1710 aa15.41■□□□□ 0.06
CDX2-201ENST00000381020 ANXA1P04083 346 aa15.41■□□□□ 0.06
CDX2-201ENST00000381020 FOXD4L6Q3SYB3 417 aaPredicted RBP15.41■□□□□ 0.06
CDX2-201ENST00000381020 FOXD4L3Q6VB84 417 aaPredicted RBP15.41■□□□□ 0.06
CDX2-201ENST00000381020 CDC45O75419 566 aa15.41■□□□□ 0.06
CDX2-201ENST00000381020 NEXNQ0ZGT2 675 aa15.41■□□□□ 0.06
CDX2-201ENST00000381020 INSRP06213 1382 aa15.41■□□□□ 0.06
CDX2-201ENST00000381020 RIC3Q7Z5B4 369 aa15.41■□□□□ 0.06
CDX2-201ENST00000381020 BTBD11A6QL63 1104 aa15.4■□□□□ 0.06
CDX2-201ENST00000381020 SEC24BO95487 1268 aa15.4■□□□□ 0.06
CDX2-201ENST00000381020 STRN4Q9NRL3 753 aa15.4■□□□□ 0.06
CDX2-201ENST00000381020 IL1RAPL2Q9NP60 686 aa15.4■□□□□ 0.06
CDX2-201ENST00000381020 INO80Q9ULG1 1556 aaPredicted RBP15.4■□□□□ 0.06
CDX2-201ENST00000381020 KDM2BQ8NHM5 1336 aa15.4■□□□□ 0.06
CDX2-201ENST00000381020 TAF7Q15545 349 aaPredicted RBP15.4■□□□□ 0.06
CDX2-201ENST00000381020 MRPL50Q8N5N7 158 aaKnown RBP15.4■□□□□ 0.06
CDX2-201ENST00000381020 GBP4Q96PP9 640 aa15.4■□□□□ 0.06
CDX2-201ENST00000381020 SYTL4Q96C24 671 aaPredicted RBP15.39■□□□□ 0.05
CDX2-201ENST00000381020 PPRC1Q5VV67 1664 aaKnown RBP15.39■□□□□ 0.05
CDX2-201ENST00000381020 CCT4P50991 539 aaKnown RBP15.39■□□□□ 0.05
CDX2-201ENST00000381020 LRRC59Q96AG4 307 aaKnown RBP15.39■□□□□ 0.05
CDX2-201ENST00000381020 KIDINS220Q9ULH0 1771 aa15.39■□□□□ 0.05
CDX2-201ENST00000381020 ST18O60284 1047 aa15.39■□□□□ 0.05
CDX2-201ENST00000381020 GSE1Q14687 1217 aa15.39■□□□□ 0.05
CDX2-201ENST00000381020 KCNH5Q8NCM2 988 aa15.39■□□□□ 0.05
CDX2-201ENST00000381020 EDC4Q6P2E9 1401 aaKnown RBP15.39■□□□□ 0.05
CDX2-201ENST00000381020 PRR36Q9H6K5 1346 aa15.39■□□□□ 0.05
CDX2-201ENST00000381020 MYL6BP14649 208 aa15.38■□□□□ 0.05
CDX2-201ENST00000381020 INTS3Q68E01 1043 aaKnown RBP15.38■□□□□ 0.05
CDX2-201ENST00000381020 PLEKHF1Q96S99 279 aa15.38■□□□□ 0.05
CDX2-201ENST00000381020 HDAC5Q9UQL6 1122 aa15.38■□□□□ 0.05
CDX2-201ENST00000381020 ABCA6Q8N139 1617 aa15.38■□□□□ 0.05
CDX2-201ENST00000381020 REC8O95072 547 aa15.38■□□□□ 0.05
CDX2-201ENST00000381020 MEIS3Q99687 375 aa15.38■□□□□ 0.05
CDX2-201ENST00000381020 SRCIN1Q9C0H9 1055 aa15.38■□□□□ 0.05
CDX2-201ENST00000381020 DDX58O95786 925 aaKnown RBP15.38■□□□□ 0.05
CDX2-201ENST00000381020 KRT28Q7Z3Y7 464 aa15.38■□□□□ 0.05
CDX2-201ENST00000381020 ARHGAP31Q2M1Z3 1444 aa15.37■□□□□ 0.05
CDX2-201ENST00000381020 TTC21AQ8NDW8 1320 aa15.37■□□□□ 0.05
CDX2-201ENST00000381020 ROBO2Q9HCK4 1378 aa15.37■□□□□ 0.05
CDX2-201ENST00000381020 ZFYVE9O95405 1425 aa15.37■□□□□ 0.05
CDX2-201ENST00000381020 GPATCH3Q96I76 525 aa15.37■□□□□ 0.05
CDX2-201ENST00000381020 TATP17735 454 aaPredicted RBP15.37■□□□□ 0.05
CDX2-201ENST00000381020 RPAP2Q8IXW5 612 aaPredicted RBP15.37■□□□□ 0.05
CDX2-201ENST00000381020 TRIM44Q96DX7 344 aaPredicted RBP15.37■□□□□ 0.05
CDX2-201ENST00000381020 CHRNA2Q15822 529 aa15.36■□□□□ 0.05
CDX2-201ENST00000381020 DDX54Q8TDD1 881 aaKnown RBP15.36■□□□□ 0.05
CDX2-201ENST00000381020 ORAI2Q96SN7 254 aa15.36■□□□□ 0.05
CDX2-201ENST00000381020 ZBTB40Q9NUA8 1239 aa15.36■□□□□ 0.05
CDX2-201ENST00000381020 FLIIQ13045 1269 aa15.36■□□□□ 0.05
CDX2-201ENST00000381020 MAP4K4O95819 1239 aaPredicted RBP15.36■□□□□ 0.05
CDX2-201ENST00000381020 IFIT2P09913 472 aaKnown RBP15.36■□□□□ 0.05
CDX2-201ENST00000381020 PRDM11Q9NQV5 511 aa15.36■□□□□ 0.05
CDX2-201ENST00000381020 CHMP5Q9NZZ3 219 aa15.36■□□□□ 0.05
CDX2-201ENST00000381020 SRGAP3O43295 1099 aa15.35■□□□□ 0.05
CDX2-201ENST00000381020 HSPA2P54652 639 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms