RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 DENND4BO75064 1496 aaPredicted RBP16.39■□□□□ 0.21
C9orf47-203ENST00000375851 CEBPAP49715 358 aaPredicted RBP16.39■□□□□ 0.21
C9orf47-203ENST00000375851 DUSP27Q5VZP5 1158 aa16.39■□□□□ 0.21
C9orf47-203ENST00000375851 DISP3Q9P2K9 1392 aa16.39■□□□□ 0.21
C9orf47-203ENST00000375851 SASS6Q6UVJ0 657 aa16.39■□□□□ 0.21
C9orf47-203ENST00000375851 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
C9orf47-203ENST00000375851 FYB1O15117 783 aa16.38■□□□□ 0.21
C9orf47-203ENST00000375851 IL1RAPL2Q9NP60 686 aa16.37■□□□□ 0.21
C9orf47-203ENST00000375851 IFT57Q9NWB7 429 aa16.37■□□□□ 0.21
C9orf47-203ENST00000375851 TPM1P09493 284 aa16.37■□□□□ 0.21
C9orf47-203ENST00000375851 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
C9orf47-203ENST00000375851 NOC3LQ8WTT2 800 aaKnown RBP16.36■□□□□ 0.21
C9orf47-203ENST00000375851 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
C9orf47-203ENST00000375851 PDCP20941 246 aa16.36■□□□□ 0.21
C9orf47-203ENST00000375851 HOOK1Q9UJC3 728 aaKnown RBP16.36■□□□□ 0.21
C9orf47-203ENST00000375851 NUP153P49790 1475 aaKnown RBP16.36■□□□□ 0.21
C9orf47-203ENST00000375851 UGGT2Q9NYU1 1516 aa16.36■□□□□ 0.21
C9orf47-203ENST00000375851 CCDC158Q5M9N0 1113 aa16.35■□□□□ 0.21
C9orf47-203ENST00000375851 ALDH1L2Q3SY69 923 aa16.35■□□□□ 0.21
C9orf47-203ENST00000375851 EXOC6BQ9Y2D4 811 aa16.35■□□□□ 0.21
C9orf47-203ENST00000375851 MAP4K4O95819 1239 aaPredicted RBP16.35■□□□□ 0.21
C9orf47-203ENST00000375851 MRE11P49959 708 aa16.35■□□□□ 0.21
C9orf47-203ENST00000375851 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
C9orf47-203ENST00000375851 FOXO3O43524 673 aa16.34■□□□□ 0.21
C9orf47-203ENST00000375851 PHF8Q9UPP1 1060 aa16.34■□□□□ 0.21
C9orf47-203ENST00000375851 CAVIN1Q6NZI2 390 aaKnown RBP16.34■□□□□ 0.21
C9orf47-203ENST00000375851 RNF214Q8ND24 703 aa16.34■□□□□ 0.21
C9orf47-203ENST00000375851 SDF4Q9BRK5 362 aa16.34■□□□□ 0.21
C9orf47-203ENST00000375851 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
C9orf47-203ENST00000375851 PRPF40AO75400 957 aaKnown RBP16.34■□□□□ 0.21
C9orf47-203ENST00000375851 MBD3O95983 291 aa16.34■□□□□ 0.21
C9orf47-203ENST00000375851 CCDC47Q96A33 483 aaKnown RBP16.34■□□□□ 0.21
C9orf47-203ENST00000375851 AACSQ86V21 672 aa16.33■□□□□ 0.21
C9orf47-203ENST00000375851 PLCH2O75038 1416 aa16.33■□□□□ 0.21
C9orf47-203ENST00000375851 CYP46A1Q9Y6A2 500 aa16.33■□□□□ 0.2
C9orf47-203ENST00000375851 TPM2P07951 284 aa16.33■□□□□ 0.2
C9orf47-203ENST00000375851 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
C9orf47-203ENST00000375851 SKAP1Q86WV1 359 aa16.33■□□□□ 0.2
C9orf47-203ENST00000375851 K7ELQ4 463 aaPredicted RBP16.33■□□□□ 0.2
C9orf47-203ENST00000375851 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.2
C9orf47-203ENST00000375851 MAPKBP1O60336 1514 aa16.32■□□□□ 0.2
C9orf47-203ENST00000375851 TAF7Q15545 349 aaPredicted RBP16.32■□□□□ 0.2
C9orf47-203ENST00000375851 ANKRD20A12PQ8NF67 263 aa16.32■□□□□ 0.2
C9orf47-203ENST00000375851 KDM5BQ9UGL1 1544 aa16.32■□□□□ 0.2
C9orf47-203ENST00000375851 RAPGEF6Q8TEU7 1601 aa16.32■□□□□ 0.2
C9orf47-203ENST00000375851 CCDC57Q2TAC2 916 aa16.32■□□□□ 0.2
C9orf47-203ENST00000375851 TTC39AQ5SRH9 613 aa16.32■□□□□ 0.2
C9orf47-203ENST00000375851 NASPP49321 788 aaPredicted RBP16.32■□□□□ 0.2
C9orf47-203ENST00000375851 USHBP1Q8N6Y0 703 aa16.32■□□□□ 0.2
C9orf47-203ENST00000375851 ZNF592Q92610 1267 aa16.31■□□□□ 0.2
C9orf47-203ENST00000375851 NUTM2BA6NNL0 878 aaPredicted RBP16.31■□□□□ 0.2
C9orf47-203ENST00000375851 NUTM2EB1AL46 878 aaPredicted RBP16.31■□□□□ 0.2
C9orf47-203ENST00000375851 FIBPO43427 364 aa16.31■□□□□ 0.2
C9orf47-203ENST00000375851 NUTM2AQ8IVF1 878 aaPredicted RBP16.31■□□□□ 0.2
C9orf47-203ENST00000375851 CCAR2Q8N163 923 aaKnown RBP16.31■□□□□ 0.2
C9orf47-203ENST00000375851 CWC22Q9HCG8 908 aaKnown RBP16.3■□□□□ 0.2
C9orf47-203ENST00000375851 CEP126Q9P2H0 1117 aa16.3■□□□□ 0.2
C9orf47-203ENST00000375851 NSD2O96028 1365 aa16.3■□□□□ 0.2
C9orf47-203ENST00000375851 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
C9orf47-203ENST00000375851 KDM4AO75164 1064 aa16.3■□□□□ 0.2
C9orf47-203ENST00000375851 XBP1P17861 261 aa16.3■□□□□ 0.2
C9orf47-203ENST00000375851 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
C9orf47-203ENST00000375851 CEP89Q96ST8 783 aa16.29■□□□□ 0.2
C9orf47-203ENST00000375851 TRIM27P14373 513 aa16.29■□□□□ 0.2
C9orf47-203ENST00000375851 RRP12Q5JTH9 1297 aaKnown RBP16.29■□□□□ 0.2
C9orf47-203ENST00000375851 MTMR7Q9Y216 660 aa16.29■□□□□ 0.2
C9orf47-203ENST00000375851 IPO7O95373 1038 aaKnown RBP16.29■□□□□ 0.2
C9orf47-203ENST00000375851 ATP2B1P20020 1258 aa16.29■□□□□ 0.2
C9orf47-203ENST00000375851 CWC27Q6UX04 472 aaKnown RBP16.29■□□□□ 0.2
C9orf47-203ENST00000375851 PCMTD1Q96MG8 357 aaPredicted RBP16.29■□□□□ 0.2
C9orf47-203ENST00000375851 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.29■□□□□ 0.2
C9orf47-203ENST00000375851 CTDP1Q9Y5B0 961 aaPredicted RBP16.29■□□□□ 0.2
C9orf47-203ENST00000375851 F6X3S4 739 aa16.28■□□□□ 0.2
C9orf47-203ENST00000375851 PTCD1O75127 700 aaKnown RBP16.28■□□□□ 0.2
C9orf47-203ENST00000375851 PDE4CQ08493 712 aa16.28■□□□□ 0.2
C9orf47-203ENST00000375851 MPHOSPH8Q99549 860 aa16.28■□□□□ 0.2
C9orf47-203ENST00000375851 AMOTQ4VCS5 1084 aa16.28■□□□□ 0.2
C9orf47-203ENST00000375851 AEBP2Q6ZN18 517 aaPredicted RBP16.28■□□□□ 0.2
C9orf47-203ENST00000375851 BRMS1Q9HCU9 246 aa16.28■□□□□ 0.2
C9orf47-203ENST00000375851 FKBP4Q02790 459 aaKnown RBP eCLIP16.27■□□□□ 0.2
C9orf47-203ENST00000375851 NUTM1Q86Y26 1132 aa16.27■□□□□ 0.2
C9orf47-203ENST00000375851 ANKRD1Q15327 319 aa16.27■□□□□ 0.19
C9orf47-203ENST00000375851 FAM43AQ8N2R8 423 aa16.27■□□□□ 0.19
C9orf47-203ENST00000375851 KIF1BPQ96EK5 621 aa16.27■□□□□ 0.19
C9orf47-203ENST00000375851 GNL3LQ9NVN8 582 aaKnown RBP16.27■□□□□ 0.19
C9orf47-203ENST00000375851 FBLN1P23142 703 aa16.26■□□□□ 0.19
C9orf47-203ENST00000375851 STK3Q13188 491 aa16.26■□□□□ 0.19
C9orf47-203ENST00000375851 BLOC1S2Q6QNY1 142 aa16.26■□□□□ 0.19
C9orf47-203ENST00000375851 HOMER1Q86YM7 354 aa16.26■□□□□ 0.19
C9orf47-203ENST00000375851 GOLGA6L1Q8N7Z2 621 aa16.26■□□□□ 0.19
C9orf47-203ENST00000375851 TCEAL9Q9UHQ7 104 aa16.26■□□□□ 0.19
C9orf47-203ENST00000375851 MPRIPQ6WCQ1 1025 aa16.26■□□□□ 0.19
C9orf47-203ENST00000375851 SMARCA5O60264 1052 aaPredicted RBP16.26■□□□□ 0.19
C9orf47-203ENST00000375851 KINO60870 393 aaKnown RBP16.26■□□□□ 0.19
C9orf47-203ENST00000375851 RALGAPBQ86X10 1494 aa16.25■□□□□ 0.19
C9orf47-203ENST00000375851 HSP90AA2PQ14568 343 aaPredicted RBP16.25■□□□□ 0.19
C9orf47-203ENST00000375851 ACEP12821 1306 aa16.25■□□□□ 0.19
C9orf47-203ENST00000375851 WDR33Q9C0J8 1336 aaKnown RBP16.25■□□□□ 0.19
C9orf47-203ENST00000375851 ASXL2Q76L83 1435 aa16.25■□□□□ 0.19
C9orf47-203ENST00000375851 MX1P20591 662 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms