RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 CDC42BPGQ6DT37 1551 aa23.38■■□□□ 1.33
RXRB-202ENST00000374685 C3P01024 1663 aa23.38■■□□□ 1.33
RXRB-202ENST00000374685 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.38■■□□□ 1.33
RXRB-202ENST00000374685 RTL5Q5HYW3 569 aaPredicted RBP23.37■■□□□ 1.33
RXRB-202ENST00000374685 EIF4A2Q14240 407 aaKnown RBP23.36■■□□□ 1.33
RXRB-202ENST00000374685 TSPYL6Q8N831 410 aa23.36■■□□□ 1.33
RXRB-202ENST00000374685 TBX22Q9Y458 520 aa23.36■■□□□ 1.33
RXRB-202ENST00000374685 MVPQ14764 893 aaKnown RBP23.35■■□□□ 1.33
RXRB-202ENST00000374685 FER1L4A9Z1Z3 1794 aa23.34■■□□□ 1.33
RXRB-202ENST00000374685 ATF7IPQ6VMQ6 1270 aa23.32■■□□□ 1.32
RXRB-202ENST00000374685 PLEKHG3A1L390 1219 aa23.32■■□□□ 1.32
RXRB-202ENST00000374685 FAM161AQ3B820 660 aa23.32■■□□□ 1.32
RXRB-202ENST00000374685 TMEM57Q8N5G2 664 aa23.32■■□□□ 1.32
RXRB-202ENST00000374685 KNDC1Q76NI1 1749 aa23.31■■□□□ 1.32
RXRB-202ENST00000374685 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
RXRB-202ENST00000374685 IL16Q14005 1332 aa23.3■■□□□ 1.32
RXRB-202ENST00000374685 SLC4A3P48751 1232 aa23.3■■□□□ 1.32
RXRB-202ENST00000374685 NLRP6P59044 892 aa23.3■■□□□ 1.32
RXRB-202ENST00000374685 C8orf34Q49A92 452 aa23.3■■□□□ 1.32
RXRB-202ENST00000374685 USP6P35125 1406 aa23.3■■□□□ 1.32
RXRB-202ENST00000374685 AATKQ6ZMQ8 1374 aa23.3■■□□□ 1.32
RXRB-202ENST00000374685 ZBTB7CA1YPR0 619 aa23.3■■□□□ 1.32
RXRB-202ENST00000374685 MCM10Q7L590 875 aa23.3■■□□□ 1.32
RXRB-202ENST00000374685 CDK12Q9NYV4 1490 aaPredicted RBP23.29■■□□□ 1.32
RXRB-202ENST00000374685 ITSN1Q15811 1721 aa23.29■■□□□ 1.32
RXRB-202ENST00000374685 LTV1Q96GA3 475 aaPredicted RBP23.29■■□□□ 1.32
RXRB-202ENST00000374685 AMPHP49418 695 aa23.29■■□□□ 1.32
RXRB-202ENST00000374685 NCBP3Q53F19 620 aaKnown RBP23.29■■□□□ 1.32
RXRB-202ENST00000374685 KRT24Q2M2I5 525 aa23.28■■□□□ 1.32
RXRB-202ENST00000374685 CT47B1P0C2W7 299 aaPredicted RBP23.27■■□□□ 1.32
RXRB-202ENST00000374685 MAP3K19Q56UN5 1328 aa23.27■■□□□ 1.32
RXRB-202ENST00000374685 PDZRN3Q9UPQ7 1066 aa23.26■■□□□ 1.31
RXRB-202ENST00000374685 MON2Q7Z3U7 1717 aa23.26■■□□□ 1.31
RXRB-202ENST00000374685 GNAI1P63096 354 aa23.26■■□□□ 1.31
RXRB-202ENST00000374685 C8orf58Q8NAV2 365 aa23.26■■□□□ 1.31
RXRB-202ENST00000374685 RWDD1Q9H446 243 aaPredicted RBP23.26■■□□□ 1.31
RXRB-202ENST00000374685 MIS18AQ9NYP9 233 aa23.25■■□□□ 1.31
RXRB-202ENST00000374685 FOXO3O43524 673 aa23.25■■□□□ 1.31
RXRB-202ENST00000374685 TWISTNBQ3B726 338 aaPredicted RBP23.24■■□□□ 1.31
RXRB-202ENST00000374685 C1orf115Q9H7X2 142 aa23.24■■□□□ 1.31
RXRB-202ENST00000374685 ABTB2Q8N961 1025 aa23.23■■□□□ 1.31
RXRB-202ENST00000374685 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.23■■□□□ 1.31
RXRB-202ENST00000374685 ARHGAP23Q9P227 1491 aa23.23■■□□□ 1.31
RXRB-202ENST00000374685 IPO8O15397 1037 aaKnown RBP23.23■■□□□ 1.31
RXRB-202ENST00000374685 VAMP4O75379 141 aa23.23■■□□□ 1.31
RXRB-202ENST00000374685 CALD1Q05682 793 aaKnown RBP23.23■■□□□ 1.31
RXRB-202ENST00000374685 ANKLE2Q86XL3 938 aa23.23■■□□□ 1.31
RXRB-202ENST00000374685 KIF16BQ96L93 1317 aa23.23■■□□□ 1.31
RXRB-202ENST00000374685 SLIT1O75093 1534 aa23.23■■□□□ 1.31
RXRB-202ENST00000374685 AKAP12Q02952 1782 aa23.22■■□□□ 1.31
RXRB-202ENST00000374685 DDX19BQ9UMR2 479 aa23.22■■□□□ 1.31
RXRB-202ENST00000374685 RTN4Q9NQC3 1192 aaKnown RBP23.22■■□□□ 1.31
RXRB-202ENST00000374685 IFT57Q9NWB7 429 aa23.22■■□□□ 1.31
RXRB-202ENST00000374685 RGPD8O14715 1765 aaPredicted RBP23.21■■□□□ 1.31
RXRB-202ENST00000374685 OVOS2A0A0J9YW53 1432 aa23.21■■□□□ 1.31
RXRB-202ENST00000374685 OVOS2Q6IE36 1432 aa23.21■■□□□ 1.31
RXRB-202ENST00000374685 LMOD3Q0VAK6 560 aa23.21■■□□□ 1.31
RXRB-202ENST00000374685 XPCQ01831 940 aaPredicted RBP23.2■■□□□ 1.3
RXRB-202ENST00000374685 CFAP44Q96MT7 982 aa23.19■■□□□ 1.3
RXRB-202ENST00000374685 SEC24BO95487 1268 aa23.19■■□□□ 1.3
RXRB-202ENST00000374685 LMOD2Q6P5Q4 547 aa23.18■■□□□ 1.3
RXRB-202ENST00000374685 DIP2AQ14689 1571 aa23.18■■□□□ 1.3
RXRB-202ENST00000374685 ESCO1Q5FWF5 840 aa23.17■■□□□ 1.3
RXRB-202ENST00000374685 RIMS1Q86UR5 1692 aaKnown RBP23.17■■□□□ 1.3
RXRB-202ENST00000374685 DAXXQ9UER7 740 aaPredicted RBP23.17■■□□□ 1.3
RXRB-202ENST00000374685 ALDH1L2Q3SY69 923 aa23.16■■□□□ 1.3
RXRB-202ENST00000374685 MRPL50Q8N5N7 158 aaKnown RBP23.16■■□□□ 1.3
RXRB-202ENST00000374685 USHBP1Q8N6Y0 703 aa23.16■■□□□ 1.3
RXRB-202ENST00000374685 PTCH1Q13635 1447 aa23.16■■□□□ 1.3
RXRB-202ENST00000374685 ZNF853P0CG23 659 aa23.15■■□□□ 1.3
RXRB-202ENST00000374685 EYA1Q99502 592 aa23.15■■□□□ 1.3
RXRB-202ENST00000374685 TTC21AQ8NDW8 1320 aa23.15■■□□□ 1.3
RXRB-202ENST00000374685 MTHFSDQ2M296 383 aaKnown RBP23.14■■□□□ 1.29
RXRB-202ENST00000374685 CEP170BQ9Y4F5 1589 aaPredicted RBP23.14■■□□□ 1.29
RXRB-202ENST00000374685 RTF1Q92541 710 aaKnown RBP23.13■■□□□ 1.29
RXRB-202ENST00000374685 ZBTB40Q9NUA8 1239 aa23.13■■□□□ 1.29
RXRB-202ENST00000374685 PHF8Q9UPP1 1060 aa23.13■■□□□ 1.29
RXRB-202ENST00000374685 USP35Q9P2H5 1018 aa23.12■■□□□ 1.29
RXRB-202ENST00000374685 DLG5Q8TDM6 1919 aa23.11■■□□□ 1.29
RXRB-202ENST00000374685 AAMPQ13685 434 aa23.11■■□□□ 1.29
RXRB-202ENST00000374685 TOPAZ1Q8N9V7 1692 aa23.11■■□□□ 1.29
RXRB-202ENST00000374685 PSME1Q06323 249 aa23.11■■□□□ 1.29
RXRB-202ENST00000374685 PEAK1Q9H792 1746 aa23.11■■□□□ 1.29
RXRB-202ENST00000374685 SSH2Q76I76 1423 aa23.11■■□□□ 1.29
RXRB-202ENST00000374685 FLT4P35916 1363 aa23.11■■□□□ 1.29
RXRB-202ENST00000374685 LNPKQ9C0E8 428 aa23.1■■□□□ 1.29
RXRB-202ENST00000374685 NECTIN2Q92692 538 aa23.1■■□□□ 1.29
RXRB-202ENST00000374685 NRKQ7Z2Y5 1582 aa23.1■■□□□ 1.29
RXRB-202ENST00000374685 USP31Q70CQ4 1352 aa23.1■■□□□ 1.29
RXRB-202ENST00000374685 DDRGK1Q96HY6 314 aa23.09■■□□□ 1.29
RXRB-202ENST00000374685 SBNO1A3KN83 1393 aa23.07■■□□□ 1.28
RXRB-202ENST00000374685 TSPYL4Q9UJ04 414 aa23.07■■□□□ 1.28
RXRB-202ENST00000374685 HOXC9P31274 260 aa23.07■■□□□ 1.28
RXRB-202ENST00000374685 ORAI2Q96SN7 254 aa23.07■■□□□ 1.28
RXRB-202ENST00000374685 SETD1BQ9UPS6 1966 aaKnown RBP23.07■■□□□ 1.28
RXRB-202ENST00000374685 ZBTB7BO15156 539 aaPredicted RBP23.04■■□□□ 1.28
RXRB-202ENST00000374685 ZNF428Q96B54 188 aa23.04■■□□□ 1.28
RXRB-202ENST00000374685 HDAC1Q13547 482 aaPredicted RBP23.04■■□□□ 1.28
RXRB-202ENST00000374685 CHL1O00533 1208 aa23.03■■□□□ 1.28
RXRB-202ENST00000374685 ANKRD45Q5TZF3 282 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms