RNA–Protein interactions for RNA: ENST00000373093.4

GRIK3-202, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIK3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-202ENST00000373093 NECTIN2Q92692 538 aa13.62□□□□□ -0.23
GRIK3-202ENST00000373093 YTHDC2Q9H6S0 1430 aaKnown RBP13.62□□□□□ -0.23
GRIK3-202ENST00000373093 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
GRIK3-202ENST00000373093 TWISTNBQ3B726 338 aaPredicted RBP13.62□□□□□ -0.23
GRIK3-202ENST00000373093 GAS2L2Q8NHY3 880 aa13.62□□□□□ -0.23
GRIK3-202ENST00000373093 CD163L1Q9NR16 1453 aa13.62□□□□□ -0.23
GRIK3-202ENST00000373093 TBC1D9Q6ZT07 1266 aa13.61□□□□□ -0.23
GRIK3-202ENST00000373093 MRPL50Q8N5N7 158 aaKnown RBP13.61□□□□□ -0.23
GRIK3-202ENST00000373093 NEXMIFQ5QGS0 1516 aa13.61□□□□□ -0.23
GRIK3-202ENST00000373093 FCHSD2O94868 740 aa13.61□□□□□ -0.23
GRIK3-202ENST00000373093 PKP1Q13835 747 aa13.61□□□□□ -0.23
GRIK3-202ENST00000373093 TSHZ3Q63HK5 1081 aa13.61□□□□□ -0.23
GRIK3-202ENST00000373093 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
GRIK3-202ENST00000373093 SETBP1Q9Y6X0 1596 aa13.6□□□□□ -0.23
GRIK3-202ENST00000373093 DDX11L8A8MPP1 907 aa13.6□□□□□ -0.23
GRIK3-202ENST00000373093 MPNDQ8N594 471 aa13.6□□□□□ -0.23
GRIK3-202ENST00000373093 SLC52A1Q9NWF4 448 aa13.6□□□□□ -0.23
GRIK3-202ENST00000373093 AK9Q5TCS8 1911 aa13.6□□□□□ -0.23
GRIK3-202ENST00000373093 KIF16BQ96L93 1317 aa13.6□□□□□ -0.23
GRIK3-202ENST00000373093 NFE2L2Q16236 605 aa13.6□□□□□ -0.23
GRIK3-202ENST00000373093 PPIP5K1Q6PFW1 1433 aa13.6□□□□□ -0.23
GRIK3-202ENST00000373093 TSPOAP1O95153 1857 aa13.6□□□□□ -0.23
GRIK3-202ENST00000373093 KIF2CQ99661 725 aa13.59□□□□□ -0.23
GRIK3-202ENST00000373093 DDX49Q9Y6V7 483 aaKnown RBP13.59□□□□□ -0.23
GRIK3-202ENST00000373093 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
GRIK3-202ENST00000373093 FOXO3O43524 673 aa13.59□□□□□ -0.23
GRIK3-202ENST00000373093 FOXD4L6Q3SYB3 417 aaPredicted RBP13.59□□□□□ -0.23
GRIK3-202ENST00000373093 SULT6B1Q6IMI4 303 aa13.59□□□□□ -0.23
GRIK3-202ENST00000373093 FOXD4L3Q6VB84 417 aaPredicted RBP13.59□□□□□ -0.23
GRIK3-202ENST00000373093 COL3A1P02461 1466 aaPredicted RBP13.58□□□□□ -0.23
GRIK3-202ENST00000373093 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
GRIK3-202ENST00000373093 SLC4A10Q6U841 1118 aa13.58□□□□□ -0.24
GRIK3-202ENST00000373093 LMTK2Q8IWU2 1503 aa13.58□□□□□ -0.24
GRIK3-202ENST00000373093 CFAP74Q9C0B2 1584 aa13.58□□□□□ -0.24
GRIK3-202ENST00000373093 ZC3H13Q5T200 1668 aaKnown RBP13.58□□□□□ -0.24
GRIK3-202ENST00000373093 PTPRMP28827 1452 aa13.58□□□□□ -0.24
GRIK3-202ENST00000373093 MCTP1Q6DN14 999 aa13.58□□□□□ -0.24
GRIK3-202ENST00000373093 MYO5BQ9ULV0 1848 aa13.58□□□□□ -0.24
GRIK3-202ENST00000373093 MLH3Q9UHC1 1453 aa13.57□□□□□ -0.24
GRIK3-202ENST00000373093 F6X3S4 739 aa13.57□□□□□ -0.24
GRIK3-202ENST00000373093 IL13P35225 146 aa13.57□□□□□ -0.24
GRIK3-202ENST00000373093 NSD2O96028 1365 aa13.57□□□□□ -0.24
GRIK3-202ENST00000373093 GSPT1P15170 499 aaKnown RBP13.57□□□□□ -0.24
GRIK3-202ENST00000373093 KIAA1211Q6ZU35 1233 aa13.57□□□□□ -0.24
GRIK3-202ENST00000373093 ZNF428Q96B54 188 aa13.57□□□□□ -0.24
GRIK3-202ENST00000373093 NEO1Q92859 1461 aa13.57□□□□□ -0.24
GRIK3-202ENST00000373093 DTNBO60941 627 aa13.56□□□□□ -0.24
GRIK3-202ENST00000373093 NUTM2GQ5VZR2 741 aa13.56□□□□□ -0.24
GRIK3-202ENST00000373093 CAVIN1Q6NZI2 390 aaKnown RBP13.56□□□□□ -0.24
GRIK3-202ENST00000373093 NOL8Q76FK4 1167 aaKnown RBP13.56□□□□□ -0.24
GRIK3-202ENST00000373093 GBP4Q96PP9 640 aa13.56□□□□□ -0.24
GRIK3-202ENST00000373093 RBM27Q9P2N5 1060 aaKnown RBP13.56□□□□□ -0.24
GRIK3-202ENST00000373093 NUDT16Q96DE0 195 aaKnown RBP13.56□□□□□ -0.24
GRIK3-202ENST00000373093 HECW2Q9P2P5 1572 aa13.56□□□□□ -0.24
GRIK3-202ENST00000373093 PIK3C2BO00750 1634 aa13.56□□□□□ -0.24
GRIK3-202ENST00000373093 NASPP49321 788 aaPredicted RBP13.56□□□□□ -0.24
GRIK3-202ENST00000373093 HSP90AB2PQ58FF8 381 aa13.56□□□□□ -0.24
GRIK3-202ENST00000373093 LRRC7Q96NW7 1537 aa13.56□□□□□ -0.24
GRIK3-202ENST00000373093 RAB3GAP1Q15042 981 aa13.55□□□□□ -0.24
GRIK3-202ENST00000373093 GLIPR1L2Q4G1C9 344 aa13.55□□□□□ -0.24
GRIK3-202ENST00000373093 CT47B1P0C2W7 299 aaPredicted RBP13.55□□□□□ -0.24
GRIK3-202ENST00000373093 AAMPQ13685 434 aa13.55□□□□□ -0.24
GRIK3-202ENST00000373093 COG3Q96JB2 828 aa13.55□□□□□ -0.24
GRIK3-202ENST00000373093 DDIT3P35638 169 aa13.54□□□□□ -0.24
GRIK3-202ENST00000373093 MEIS3Q99687 375 aa13.54□□□□□ -0.24
GRIK3-202ENST00000373093 METP08581 1390 aa13.54□□□□□ -0.24
GRIK3-202ENST00000373093 K7ELQ4 463 aaPredicted RBP13.53□□□□□ -0.24
GRIK3-202ENST00000373093 RBM25P49756 843 aaKnown RBP13.53□□□□□ -0.24
GRIK3-202ENST00000373093 GNAI1P63096 354 aa13.53□□□□□ -0.24
GRIK3-202ENST00000373093 ALDH1L2Q3SY69 923 aa13.53□□□□□ -0.24
GRIK3-202ENST00000373093 ADGRB2O60241 1585 aa13.53□□□□□ -0.24
GRIK3-202ENST00000373093 WASLO00401 505 aaPredicted RBP13.53□□□□□ -0.24
GRIK3-202ENST00000373093 IL16Q14005 1332 aa13.53□□□□□ -0.24
GRIK3-202ENST00000373093 CEBPAP49715 358 aaPredicted RBP13.53□□□□□ -0.24
GRIK3-202ENST00000373093 XPCQ01831 940 aaPredicted RBP13.53□□□□□ -0.24
GRIK3-202ENST00000373093 G2E3Q7L622 706 aa13.53□□□□□ -0.24
GRIK3-202ENST00000373093 ZGPATQ8N5A5 531 aaKnown RBP13.53□□□□□ -0.24
GRIK3-202ENST00000373093 FAM13BQ9NYF5 915 aa13.53□□□□□ -0.24
GRIK3-202ENST00000373093 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
GRIK3-202ENST00000373093 RNF214Q8ND24 703 aa13.52□□□□□ -0.24
GRIK3-202ENST00000373093 SLC26A8Q96RN1 970 aa13.52□□□□□ -0.24
GRIK3-202ENST00000373093 DIP2BQ9P265 1576 aa13.52□□□□□ -0.25
GRIK3-202ENST00000373093 BAG4O95429 457 aaKnown RBP13.52□□□□□ -0.25
GRIK3-202ENST00000373093 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.25
GRIK3-202ENST00000373093 PNPLA6Q8IY17 1366 aa13.52□□□□□ -0.25
GRIK3-202ENST00000373093 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
GRIK3-202ENST00000373093 NEURL4Q96JN8 1562 aa13.51□□□□□ -0.25
GRIK3-202ENST00000373093 PUS7Q96PZ0 661 aaKnown RBP13.51□□□□□ -0.25
GRIK3-202ENST00000373093 FAM135BQ49AJ0 1406 aa13.51□□□□□ -0.25
GRIK3-202ENST00000373093 PRPF40AO75400 957 aaKnown RBP13.5□□□□□ -0.25
GRIK3-202ENST00000373093 EIF4A2Q14240 407 aaKnown RBP13.5□□□□□ -0.25
GRIK3-202ENST00000373093 CFAP44Q96MT7 982 aa13.5□□□□□ -0.25
GRIK3-202ENST00000373093 PRR36Q9H6K5 1346 aa13.5□□□□□ -0.25
GRIK3-202ENST00000373093 RRP9O43818 475 aaKnown RBP13.5□□□□□ -0.25
GRIK3-202ENST00000373093 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
GRIK3-202ENST00000373093 RBM33Q96EV2 1170 aaKnown RBP13.5□□□□□ -0.25
GRIK3-202ENST00000373093 LTV1Q96GA3 475 aaPredicted RBP13.5□□□□□ -0.25
GRIK3-202ENST00000373093 DIP2CQ9Y2E4 1556 aa13.5□□□□□ -0.25
GRIK3-202ENST00000373093 IFT57Q9NWB7 429 aa13.5□□□□□ -0.25
GRIK3-202ENST00000373093 JARID2Q92833 1246 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms