RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 RTL5Q5HYW3 569 aaPredicted RBP26.78■■□□□ 1.88
SOX3-201ENST00000370536 THUMPD2Q9BTF0 503 aaKnown RBP26.78■■□□□ 1.88
SOX3-201ENST00000370536 KCNA6P17658 529 aa26.77■■□□□ 1.88
SOX3-201ENST00000370536 LAS1LQ9Y4W2 734 aaKnown RBP26.77■■□□□ 1.88
SOX3-201ENST00000370536 RIMS1Q86UR5 1692 aaKnown RBP26.77■■□□□ 1.88
SOX3-201ENST00000370536 NPM2Q86SE8 214 aaKnown RBP26.77■■□□□ 1.88
SOX3-201ENST00000370536 RGS3P49796 1198 aa26.76■■□□□ 1.87
SOX3-201ENST00000370536 AAMPQ13685 434 aa26.76■■□□□ 1.87
SOX3-201ENST00000370536 DZIP1LQ8IYY4 767 aaKnown RBP26.76■■□□□ 1.87
SOX3-201ENST00000370536 EIF4A2Q14240 407 aaKnown RBP26.75■■□□□ 1.87
SOX3-201ENST00000370536 FTSJ3Q8IY81 847 aaKnown RBP26.75■■□□□ 1.87
SOX3-201ENST00000370536 MVPQ14764 893 aaKnown RBP26.74■■□□□ 1.87
SOX3-201ENST00000370536 NGDNQ8NEJ9 315 aaKnown RBP26.74■■□□□ 1.87
SOX3-201ENST00000370536 PCDHB15Q9Y5E8 787 aa26.74■■□□□ 1.87
SOX3-201ENST00000370536 USP31Q70CQ4 1352 aa26.73■■□□□ 1.87
SOX3-201ENST00000370536 SOX12O15370 315 aa26.73■■□□□ 1.87
SOX3-201ENST00000370536 TTC21AQ8NDW8 1320 aa26.73■■□□□ 1.87
SOX3-201ENST00000370536 TRIM27P14373 513 aa26.72■■□□□ 1.87
SOX3-201ENST00000370536 NALCNQ8IZF0 1738 aa26.72■■□□□ 1.87
SOX3-201ENST00000370536 CALD1Q05682 793 aaKnown RBP26.72■■□□□ 1.87
SOX3-201ENST00000370536 RGPD8O14715 1765 aaPredicted RBP26.71■■□□□ 1.87
SOX3-201ENST00000370536 AEBP1Q8IUX7 1158 aa26.71■■□□□ 1.87
SOX3-201ENST00000370536 NOB1Q9ULX3 412 aaKnown RBP26.71■■□□□ 1.87
SOX3-201ENST00000370536 PIK3R4Q99570 1358 aa26.71■■□□□ 1.87
SOX3-201ENST00000370536 HSP90AB2PQ58FF8 381 aa26.7■■□□□ 1.86
SOX3-201ENST00000370536 ATF7IPQ6VMQ6 1270 aa26.69■■□□□ 1.86
SOX3-201ENST00000370536 PEAK1Q9H792 1746 aa26.69■■□□□ 1.86
SOX3-201ENST00000370536 SULT6B1Q6IMI4 303 aa26.69■■□□□ 1.86
SOX3-201ENST00000370536 IFT57Q9NWB7 429 aa26.69■■□□□ 1.86
SOX3-201ENST00000370536 GNAI1P63096 354 aa26.68■■□□□ 1.86
SOX3-201ENST00000370536 LMOD3Q0VAK6 560 aa26.68■■□□□ 1.86
SOX3-201ENST00000370536 ALDH1L2Q3SY69 923 aa26.68■■□□□ 1.86
SOX3-201ENST00000370536 FAM161AQ3B820 660 aa26.67■■□□□ 1.86
SOX3-201ENST00000370536 ANKLE2Q86XL3 938 aa26.67■■□□□ 1.86
SOX3-201ENST00000370536 ANKARQ7Z5J8 1434 aa26.66■■□□□ 1.86
SOX3-201ENST00000370536 FAM83GA6ND36 823 aa26.66■■□□□ 1.86
SOX3-201ENST00000370536 ZNF853P0CG23 659 aa26.66■■□□□ 1.86
SOX3-201ENST00000370536 KIF16BQ96L93 1317 aa26.66■■□□□ 1.86
SOX3-201ENST00000370536 C8orf34Q49A92 452 aa26.66■■□□□ 1.86
SOX3-201ENST00000370536 MBIPQ9NS73 344 aa26.66■■□□□ 1.86
SOX3-201ENST00000370536 DLG5Q8TDM6 1919 aa26.65■■□□□ 1.86
SOX3-201ENST00000370536 MAP3K19Q56UN5 1328 aa26.65■■□□□ 1.86
SOX3-201ENST00000370536 DCTN1Q14203 1278 aa26.64■■□□□ 1.86
SOX3-201ENST00000370536 ITPRIPQ8IWB1 547 aa26.63■■□□□ 1.85
SOX3-201ENST00000370536 VAMP4O75379 141 aa26.63■■□□□ 1.85
SOX3-201ENST00000370536 TSPYL6Q8N831 410 aa26.63■■□□□ 1.85
SOX3-201ENST00000370536 ZNF428Q96B54 188 aa26.63■■□□□ 1.85
SOX3-201ENST00000370536 IPO8O15397 1037 aaKnown RBP26.62■■□□□ 1.85
SOX3-201ENST00000370536 TMEM57Q8N5G2 664 aa26.62■■□□□ 1.85
SOX3-201ENST00000370536 CFAP44Q96MT7 982 aa26.62■■□□□ 1.85
SOX3-201ENST00000370536 DDX19BQ9UMR2 479 aa26.62■■□□□ 1.85
SOX3-201ENST00000370536 FMN2Q9NZ56 1722 aa26.61■■□□□ 1.85
SOX3-201ENST00000370536 RWDD1Q9H446 243 aaPredicted RBP26.61■■□□□ 1.85
SOX3-201ENST00000370536 PIK3C2AO00443 1686 aa26.6■■□□□ 1.85
SOX3-201ENST00000370536 ZNF142P52746 1687 aaPredicted RBP26.6■■□□□ 1.85
SOX3-201ENST00000370536 ADAMTSL3P82987 1691 aa26.6■■□□□ 1.85
SOX3-201ENST00000370536 ELL2O00472 640 aaPredicted RBP26.59■■□□□ 1.85
SOX3-201ENST00000370536 RGPD1P0DJD0 1748 aa26.59■■□□□ 1.85
SOX3-201ENST00000370536 SBNO1A3KN83 1393 aa26.59■■□□□ 1.85
SOX3-201ENST00000370536 BRPF1P55201 1214 aaPredicted RBP26.59■■□□□ 1.85
SOX3-201ENST00000370536 NLRP6P59044 892 aa26.59■■□□□ 1.85
SOX3-201ENST00000370536 USP35Q9P2H5 1018 aa26.59■■□□□ 1.85
SOX3-201ENST00000370536 FLT4P35916 1363 aa26.58■■□□□ 1.85
SOX3-201ENST00000370536 RBM33Q96EV2 1170 aaKnown RBP26.57■■□□□ 1.84
SOX3-201ENST00000370536 MRPL50Q8N5N7 158 aaKnown RBP26.57■■□□□ 1.84
SOX3-201ENST00000370536 CHD2O14647 1828 aaKnown RBP26.56■■□□□ 1.84
SOX3-201ENST00000370536 NUTM2GQ5VZR2 741 aa26.56■■□□□ 1.84
SOX3-201ENST00000370536 C8orf58Q8NAV2 365 aa26.56■■□□□ 1.84
SOX3-201ENST00000370536 PDZRN3Q9UPQ7 1066 aa26.56■■□□□ 1.84
SOX3-201ENST00000370536 AMPHP49418 695 aa26.56■■□□□ 1.84
SOX3-201ENST00000370536 TWISTNBQ3B726 338 aaPredicted RBP26.56■■□□□ 1.84
SOX3-201ENST00000370536 ARHGEF10O15013 1369 aa26.56■■□□□ 1.84
SOX3-201ENST00000370536 DDRGK1Q96HY6 314 aa26.53■■□□□ 1.84
SOX3-201ENST00000370536 ZBTB40Q9NUA8 1239 aa26.53■■□□□ 1.84
SOX3-201ENST00000370536 MCM10Q7L590 875 aa26.52■■□□□ 1.84
SOX3-201ENST00000370536 ABTB2Q8N961 1025 aa26.51■■□□□ 1.83
SOX3-201ENST00000370536 PHF8Q9UPP1 1060 aa26.51■■□□□ 1.83
SOX3-201ENST00000370536 HDAC1Q13547 482 aaPredicted RBP26.5■■□□□ 1.83
SOX3-201ENST00000370536 EYA1Q99502 592 aa26.5■■□□□ 1.83
SOX3-201ENST00000370536 ARHGAP45Q92619 1136 aa26.49■■□□□ 1.83
SOX3-201ENST00000370536 SETD1BQ9UPS6 1966 aaKnown RBP26.48■■□□□ 1.83
SOX3-201ENST00000370536 MARF1Q9Y4F3 1742 aaKnown RBP26.48■■□□□ 1.83
SOX3-201ENST00000370536 IGSF1Q8N6C5 1336 aa26.47■■□□□ 1.83
SOX3-201ENST00000370536 NPHP4O75161 1426 aaPredicted RBP26.47■■□□□ 1.83
SOX3-201ENST00000370536 KDRP35968 1356 aa26.47■■□□□ 1.83
SOX3-201ENST00000370536 CHL1O00533 1208 aa26.47■■□□□ 1.83
SOX3-201ENST00000370536 FOXO3O43524 673 aa26.47■■□□□ 1.83
SOX3-201ENST00000370536 MTHFSDQ2M296 383 aaKnown RBP26.47■■□□□ 1.83
SOX3-201ENST00000370536 C14orf37Q86TY3 774 aa26.47■■□□□ 1.83
SOX3-201ENST00000370536 ADGRL3Q9HAR2 1447 aa26.46■■□□□ 1.83
SOX3-201ENST00000370536 HOXC9P31274 260 aa26.45■■□□□ 1.83
SOX3-201ENST00000370536 KRT24Q2M2I5 525 aa26.45■■□□□ 1.82
SOX3-201ENST00000370536 USP54Q70EL1 1684 aa26.43■■□□□ 1.82
SOX3-201ENST00000370536 VIRMAQ69YN4 1812 aaKnown RBP26.43■■□□□ 1.82
SOX3-201ENST00000370536 CRB1P82279 1406 aa26.43■■□□□ 1.82
SOX3-201ENST00000370536 KIF24Q5T7B8 1368 aa26.42■■□□□ 1.82
SOX3-201ENST00000370536 ABCC4O15439 1325 aa26.42■■□□□ 1.82
SOX3-201ENST00000370536 ESCO1Q5FWF5 840 aa26.42■■□□□ 1.82
SOX3-201ENST00000370536 ZBTB7BO15156 539 aaPredicted RBP26.41■■□□□ 1.82
SOX3-201ENST00000370536 SMC5Q8IY18 1101 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms