RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 MARF1Q9Y4F3 1742 aaKnown RBP28.89■■■□□ 2.22
POLR2J2-202ENST00000358438 RRP1P56182 461 aaKnown RBP28.89■■■□□ 2.21
POLR2J2-202ENST00000358438 C19orf44Q9H6X5 657 aa28.89■■■□□ 2.21
POLR2J2-202ENST00000358438 PDE4AP27815 886 aa28.88■■■□□ 2.21
POLR2J2-202ENST00000358438 DDRGK1Q96HY6 314 aa28.88■■■□□ 2.21
POLR2J2-202ENST00000358438 BACH2Q9BYV9 841 aa28.88■■■□□ 2.21
POLR2J2-202ENST00000358438 NLRP6P59044 892 aa28.87■■■□□ 2.21
POLR2J2-202ENST00000358438 RSPH6AQ9H0K4 717 aa28.87■■■□□ 2.21
POLR2J2-202ENST00000358438 WDR63Q8IWG1 891 aa28.87■■■□□ 2.21
POLR2J2-202ENST00000358438 TMEM94Q12767 1356 aa28.86■■■□□ 2.21
POLR2J2-202ENST00000358438 SOX12O15370 315 aa28.85■■■□□ 2.21
POLR2J2-202ENST00000358438 TMPOP42166 694 aaKnown RBP28.85■■■□□ 2.21
POLR2J2-202ENST00000358438 ABTB2Q8N961 1025 aa28.85■■■□□ 2.21
POLR2J2-202ENST00000358438 NCOA3Q9Y6Q9 1424 aa28.84■■■□□ 2.21
POLR2J2-202ENST00000358438 PRKAR2BP31323 418 aa28.84■■■□□ 2.21
POLR2J2-202ENST00000358438 ORAI2Q96SN7 254 aa28.84■■■□□ 2.21
POLR2J2-202ENST00000358438 PSME1Q06323 249 aa28.83■■■□□ 2.21
POLR2J2-202ENST00000358438 MAP3K19Q56UN5 1328 aa28.83■■■□□ 2.21
POLR2J2-202ENST00000358438 HMOX1P09601 288 aa28.82■■■□□ 2.2
POLR2J2-202ENST00000358438 C1orf167Q5SNV9 1468 aa28.81■■■□□ 2.2
POLR2J2-202ENST00000358438 EIF4A2Q14240 407 aaKnown RBP28.81■■■□□ 2.2
POLR2J2-202ENST00000358438 NUTM2GQ5VZR2 741 aa28.81■■■□□ 2.2
POLR2J2-202ENST00000358438 DCCP43146 1447 aa28.8■■■□□ 2.2
POLR2J2-202ENST00000358438 KIF1AQ12756 1690 aa28.8■■■□□ 2.2
POLR2J2-202ENST00000358438 SBNO1A3KN83 1393 aa28.8■■■□□ 2.2
POLR2J2-202ENST00000358438 HSP90AB2PQ58FF8 381 aa28.79■■■□□ 2.2
POLR2J2-202ENST00000358438 RTN4Q9NQC3 1192 aaKnown RBP28.79■■■□□ 2.2
POLR2J2-202ENST00000358438 FLT4P35916 1363 aa28.78■■■□□ 2.2
POLR2J2-202ENST00000358438 TRIM35Q9UPQ4 493 aa28.78■■■□□ 2.2
POLR2J2-202ENST00000358438 LAS1LQ9Y4W2 734 aaKnown RBP28.78■■■□□ 2.2
POLR2J2-202ENST00000358438 FOXO3O43524 673 aa28.77■■■□□ 2.2
POLR2J2-202ENST00000358438 ATF3P18847 181 aa28.77■■■□□ 2.2
POLR2J2-202ENST00000358438 RIPK4P57078 832 aa28.77■■■□□ 2.2
POLR2J2-202ENST00000358438 GSE1Q14687 1217 aa28.76■■■□□ 2.19
POLR2J2-202ENST00000358438 NPM2Q86SE8 214 aaKnown RBP28.76■■■□□ 2.19
POLR2J2-202ENST00000358438 RGPD1P0DJD0 1748 aa28.76■■■□□ 2.19
POLR2J2-202ENST00000358438 MST1RQ04912 1400 aa28.75■■■□□ 2.19
POLR2J2-202ENST00000358438 PHACTR3Q96KR7 559 aa28.75■■■□□ 2.19
POLR2J2-202ENST00000358438 KIF24Q5T7B8 1368 aa28.73■■■□□ 2.19
POLR2J2-202ENST00000358438 AMPHP49418 695 aa28.73■■■□□ 2.19
POLR2J2-202ENST00000358438 MYH16Q9H6N6 1097 aa28.72■■■□□ 2.19
POLR2J2-202ENST00000358438 XIRP1Q702N8 1843 aaKnown RBP28.72■■■□□ 2.19
POLR2J2-202ENST00000358438 TRPM3Q9HCF6 1732 aaPredicted RBP28.71■■■□□ 2.19
POLR2J2-202ENST00000358438 PLIN1O60240 522 aa28.71■■■□□ 2.19
POLR2J2-202ENST00000358438 NFE2L2Q16236 605 aa28.71■■■□□ 2.19
POLR2J2-202ENST00000358438 XPCQ01831 940 aaPredicted RBP28.7■■■□□ 2.18
POLR2J2-202ENST00000358438 CADPS2Q86UW7 1296 aa28.7■■■□□ 2.18
POLR2J2-202ENST00000358438 SULT6B1Q6IMI4 303 aa28.69■■■□□ 2.18
POLR2J2-202ENST00000358438 EXOC6Q8TAG9 804 aa28.69■■■□□ 2.18
POLR2J2-202ENST00000358438 IL16Q14005 1332 aa28.69■■■□□ 2.18
POLR2J2-202ENST00000358438 MSH6P52701 1360 aa28.69■■■□□ 2.18
POLR2J2-202ENST00000358438 LTN1O94822 1766 aa28.68■■■□□ 2.18
POLR2J2-202ENST00000358438 NFAT5O94916 1531 aa28.68■■■□□ 2.18
POLR2J2-202ENST00000358438 AEBP1Q8IUX7 1158 aa28.68■■■□□ 2.18
POLR2J2-202ENST00000358438 ARHGEF10O15013 1369 aa28.67■■■□□ 2.18
POLR2J2-202ENST00000358438 HOXC9P31274 260 aa28.66■■■□□ 2.18
POLR2J2-202ENST00000358438 DLG5Q8TDM6 1919 aa28.66■■■□□ 2.18
POLR2J2-202ENST00000358438 KRT28Q7Z3Y7 464 aa28.66■■■□□ 2.18
POLR2J2-202ENST00000358438 RTL1A6NKG5 1358 aa28.65■■■□□ 2.18
POLR2J2-202ENST00000358438 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.65■■■□□ 2.18
POLR2J2-202ENST00000358438 KCNH5Q8NCM2 988 aa28.64■■■□□ 2.18
POLR2J2-202ENST00000358438 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.63■■■□□ 2.17
POLR2J2-202ENST00000358438 LTBP4Q8N2S1 1624 aa28.63■■■□□ 2.17
POLR2J2-202ENST00000358438 SLIT3O75094 1523 aa28.61■■■□□ 2.17
POLR2J2-202ENST00000358438 BCAR3O75815 825 aa28.61■■■□□ 2.17
POLR2J2-202ENST00000358438 TSR2Q969E8 191 aaKnown RBP28.61■■■□□ 2.17
POLR2J2-202ENST00000358438 IGSF1Q8N6C5 1336 aa28.61■■■□□ 2.17
POLR2J2-202ENST00000358438 KDRP35968 1356 aa28.6■■■□□ 2.17
POLR2J2-202ENST00000358438 PHRF1Q9P1Y6 1649 aaKnown RBP28.6■■■□□ 2.17
POLR2J2-202ENST00000358438 ALS2Q96Q42 1657 aa28.6■■■□□ 2.17
POLR2J2-202ENST00000358438 NFKBIBQ15653 356 aa28.59■■■□□ 2.17
POLR2J2-202ENST00000358438 EYA1Q99502 592 aa28.59■■■□□ 2.17
POLR2J2-202ENST00000358438 LMOD3Q0VAK6 560 aa28.58■■■□□ 2.17
POLR2J2-202ENST00000358438 LMOD2Q6P5Q4 547 aa28.58■■■□□ 2.17
POLR2J2-202ENST00000358438 BRPF3Q9ULD4 1205 aa28.58■■■□□ 2.17
POLR2J2-202ENST00000358438 C20orf194Q5TEA3 1177 aa28.58■■■□□ 2.17
POLR2J2-202ENST00000358438 USP19O94966 1318 aa28.57■■■□□ 2.16
POLR2J2-202ENST00000358438 CALD1Q05682 793 aaKnown RBP28.57■■■□□ 2.16
POLR2J2-202ENST00000358438 GCP02774 474 aa28.56■■■□□ 2.16
POLR2J2-202ENST00000358438 RARSP54136 660 aaKnown RBP28.56■■■□□ 2.16
POLR2J2-202ENST00000358438 IP6K1Q92551 441 aa28.56■■■□□ 2.16
POLR2J2-202ENST00000358438 CT47B1P0C2W7 299 aaPredicted RBP28.55■■■□□ 2.16
POLR2J2-202ENST00000358438 CRBNQ96SW2 442 aa28.55■■■□□ 2.16
POLR2J2-202ENST00000358438 NPHP3Q7Z494 1330 aa28.55■■■□□ 2.16
POLR2J2-202ENST00000358438 THUMPD2Q9BTF0 503 aaKnown RBP28.54■■■□□ 2.16
POLR2J2-202ENST00000358438 DDX17Q92841 729 aaKnown RBP28.54■■■□□ 2.16
POLR2J2-202ENST00000358438 EXOSC9Q06265 439 aaKnown RBP28.53■■■□□ 2.16
POLR2J2-202ENST00000358438 FAM43AQ8N2R8 423 aa28.52■■■□□ 2.16
POLR2J2-202ENST00000358438 LTV1Q96GA3 475 aaPredicted RBP28.51■■■□□ 2.15
POLR2J2-202ENST00000358438 FAM83GA6ND36 823 aa28.5■■■□□ 2.15
POLR2J2-202ENST00000358438 ARHGEF25Q86VW2 580 aa28.5■■■□□ 2.15
POLR2J2-202ENST00000358438 PXDNQ92626 1479 aa28.5■■■□□ 2.15
POLR2J2-202ENST00000358438 IFT57Q9NWB7 429 aa28.49■■■□□ 2.15
POLR2J2-202ENST00000358438 PLEKHG5O94827 1062 aa28.49■■■□□ 2.15
POLR2J2-202ENST00000358438 FRAT1Q92837 279 aaPredicted RBP28.49■■■□□ 2.15
POLR2J2-202ENST00000358438 MED1Q15648 1581 aaPredicted RBP28.48■■■□□ 2.15
POLR2J2-202ENST00000358438 GNAI1P63096 354 aa28.48■■■□□ 2.15
POLR2J2-202ENST00000358438 ZBTB7CA1YPR0 619 aa28.47■■■□□ 2.15
POLR2J2-202ENST00000358438 ZNF853P0CG23 659 aa28.47■■■□□ 2.15
POLR2J2-202ENST00000358438 BRINP3Q76B58 766 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms