RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 EIF4A2Q14240 407 aaKnown RBP19.99■□□□□ 0.79
MBD1-205ENST00000353909 PTCH1Q13635 1447 aa19.99■□□□□ 0.79
MBD1-205ENST00000353909 CT47B1P0C2W7 299 aaPredicted RBP19.98■□□□□ 0.79
MBD1-205ENST00000353909 IPO9Q96P70 1041 aaKnown RBP19.98■□□□□ 0.79
MBD1-205ENST00000353909 DCTN1Q14203 1278 aa19.98■□□□□ 0.79
MBD1-205ENST00000353909 ERICH6Q7L0X2 663 aa19.98■□□□□ 0.79
MBD1-205ENST00000353909 NOB1Q9ULX3 412 aaKnown RBP19.98■□□□□ 0.79
MBD1-205ENST00000353909 SSH2Q76I76 1423 aa19.97■□□□□ 0.79
MBD1-205ENST00000353909 DIP2AQ14689 1571 aa19.97■□□□□ 0.79
MBD1-205ENST00000353909 DZIP1LQ8IYY4 767 aaKnown RBP19.97■□□□□ 0.79
MBD1-205ENST00000353909 NGDNQ8NEJ9 315 aaKnown RBP19.97■□□□□ 0.79
MBD1-205ENST00000353909 CEP170BQ9Y4F5 1589 aaPredicted RBP19.96■□□□□ 0.79
MBD1-205ENST00000353909 MVPQ14764 893 aaKnown RBP19.96■□□□□ 0.79
MBD1-205ENST00000353909 FTSJ3Q8IY81 847 aaKnown RBP19.96■□□□□ 0.79
MBD1-205ENST00000353909 RIMS1Q86UR5 1692 aaKnown RBP19.96■□□□□ 0.79
MBD1-205ENST00000353909 SULT6B1Q6IMI4 303 aa19.96■□□□□ 0.79
MBD1-205ENST00000353909 NOP58Q9Y2X3 529 aaKnown RBP19.96■□□□□ 0.79
MBD1-205ENST00000353909 DLG5Q8TDM6 1919 aa19.95■□□□□ 0.78
MBD1-205ENST00000353909 ELL2O00472 640 aaPredicted RBP19.95■□□□□ 0.78
MBD1-205ENST00000353909 TSPYL6Q8N831 410 aa19.95■□□□□ 0.78
MBD1-205ENST00000353909 PEAK1Q9H792 1746 aa19.95■□□□□ 0.78
MBD1-205ENST00000353909 C8orf34Q49A92 452 aa19.94■□□□□ 0.78
MBD1-205ENST00000353909 XRN1Q8IZH2 1706 aaKnown RBP19.94■□□□□ 0.78
MBD1-205ENST00000353909 ATF7IPQ6VMQ6 1270 aa19.94■□□□□ 0.78
MBD1-205ENST00000353909 MBIPQ9NS73 344 aa19.93■□□□□ 0.78
MBD1-205ENST00000353909 NUTM2GQ5VZR2 741 aa19.92■□□□□ 0.78
MBD1-205ENST00000353909 MAP3K19Q56UN5 1328 aa19.92■□□□□ 0.78
MBD1-205ENST00000353909 USP31Q70CQ4 1352 aa19.92■□□□□ 0.78
MBD1-205ENST00000353909 NALCNQ8IZF0 1738 aa19.91■□□□□ 0.78
MBD1-205ENST00000353909 ZNF853P0CG23 659 aa19.9■□□□□ 0.78
MBD1-205ENST00000353909 ITPRIPQ8IWB1 547 aa19.9■□□□□ 0.78
MBD1-205ENST00000353909 TMEM57Q8N5G2 664 aa19.9■□□□□ 0.78
MBD1-205ENST00000353909 VAMP4O75379 141 aa19.9■□□□□ 0.78
MBD1-205ENST00000353909 FAM161AQ3B820 660 aa19.89■□□□□ 0.78
MBD1-205ENST00000353909 IFT57Q9NWB7 429 aa19.89■□□□□ 0.77
MBD1-205ENST00000353909 GNAI1P63096 354 aa19.88■□□□□ 0.77
MBD1-205ENST00000353909 C8orf58Q8NAV2 365 aa19.88■□□□□ 0.77
MBD1-205ENST00000353909 TTC21AQ8NDW8 1320 aa19.88■□□□□ 0.77
MBD1-205ENST00000353909 ANKLE2Q86XL3 938 aa19.88■□□□□ 0.77
MBD1-205ENST00000353909 ZBTB47Q9UFB7 747 aaPredicted RBP19.87■□□□□ 0.77
MBD1-205ENST00000353909 NLRP6P59044 892 aa19.87■□□□□ 0.77
MBD1-205ENST00000353909 CFAP44Q96MT7 982 aa19.87■□□□□ 0.77
MBD1-205ENST00000353909 MCM10Q7L590 875 aa19.86■□□□□ 0.77
MBD1-205ENST00000353909 ALDH1L2Q3SY69 923 aa19.86■□□□□ 0.77
MBD1-205ENST00000353909 PIK3C2AO00443 1686 aa19.86■□□□□ 0.77
MBD1-205ENST00000353909 AAMPQ13685 434 aa19.85■□□□□ 0.77
MBD1-205ENST00000353909 PDZRN3Q9UPQ7 1066 aa19.85■□□□□ 0.77
MBD1-205ENST00000353909 KIF16BQ96L93 1317 aa19.85■□□□□ 0.77
MBD1-205ENST00000353909 CALD1Q05682 793 aaKnown RBP19.85■□□□□ 0.77
MBD1-205ENST00000353909 KRT24Q2M2I5 525 aa19.84■□□□□ 0.77
MBD1-205ENST00000353909 FOXO3O43524 673 aa19.84■□□□□ 0.77
MBD1-205ENST00000353909 DDX19BQ9UMR2 479 aa19.84■□□□□ 0.77
MBD1-205ENST00000353909 PIK3R4Q99570 1358 aa19.84■□□□□ 0.77
MBD1-205ENST00000353909 TWISTNBQ3B726 338 aaPredicted RBP19.84■□□□□ 0.77
MBD1-205ENST00000353909 LMOD3Q0VAK6 560 aa19.83■□□□□ 0.77
MBD1-205ENST00000353909 MRPL50Q8N5N7 158 aaKnown RBP19.83■□□□□ 0.77
MBD1-205ENST00000353909 RWDD1Q9H446 243 aaPredicted RBP19.83■□□□□ 0.77
MBD1-205ENST00000353909 RGPD1P0DJD0 1748 aa19.83■□□□□ 0.76
MBD1-205ENST00000353909 IPO8O15397 1037 aaKnown RBP19.82■□□□□ 0.76
MBD1-205ENST00000353909 AMPHP49418 695 aa19.82■□□□□ 0.76
MBD1-205ENST00000353909 ZBTB40Q9NUA8 1239 aa19.82■□□□□ 0.76
MBD1-205ENST00000353909 FMN2Q9NZ56 1722 aa19.82■□□□□ 0.76
MBD1-205ENST00000353909 ABTB2Q8N961 1025 aa19.81■□□□□ 0.76
MBD1-205ENST00000353909 ANKARQ7Z5J8 1434 aa19.81■□□□□ 0.76
MBD1-205ENST00000353909 CHD2O14647 1828 aaKnown RBP19.81■□□□□ 0.76
MBD1-205ENST00000353909 EYA1Q99502 592 aa19.81■□□□□ 0.76
MBD1-205ENST00000353909 FLT4P35916 1363 aa19.81■□□□□ 0.76
MBD1-205ENST00000353909 SBNO1A3KN83 1393 aa19.8■□□□□ 0.76
MBD1-205ENST00000353909 C14orf37Q86TY3 774 aa19.8■□□□□ 0.76
MBD1-205ENST00000353909 ADAMTSL3P82987 1691 aa19.8■□□□□ 0.76
MBD1-205ENST00000353909 SEC24BO95487 1268 aa19.8■□□□□ 0.76
MBD1-205ENST00000353909 BRPF1P55201 1214 aaPredicted RBP19.79■□□□□ 0.76
MBD1-205ENST00000353909 MTHFSDQ2M296 383 aaKnown RBP19.79■□□□□ 0.76
MBD1-205ENST00000353909 MIS18AQ9NYP9 233 aa19.79■□□□□ 0.76
MBD1-205ENST00000353909 ZNF428Q96B54 188 aa19.79■□□□□ 0.76
MBD1-205ENST00000353909 SETD1BQ9UPS6 1966 aaKnown RBP19.78■□□□□ 0.76
MBD1-205ENST00000353909 PHF8Q9UPP1 1060 aa19.78■□□□□ 0.76
MBD1-205ENST00000353909 MARF1Q9Y4F3 1742 aaKnown RBP19.78■□□□□ 0.76
MBD1-205ENST00000353909 ZNF142P52746 1687 aaPredicted RBP19.76■□□□□ 0.75
MBD1-205ENST00000353909 SLC4A3P48751 1232 aa19.76■□□□□ 0.75
MBD1-205ENST00000353909 LTV1Q96GA3 475 aaPredicted RBP19.76■□□□□ 0.75
MBD1-205ENST00000353909 NBR1Q14596 966 aa19.76■□□□□ 0.75
MBD1-205ENST00000353909 C1orf115Q9H7X2 142 aa19.76■□□□□ 0.75
MBD1-205ENST00000353909 ARHGEF10O15013 1369 aa19.76■□□□□ 0.75
MBD1-205ENST00000353909 CHL1O00533 1208 aa19.75■□□□□ 0.75
MBD1-205ENST00000353909 HOXC9P31274 260 aa19.75■□□□□ 0.75
MBD1-205ENST00000353909 HDAC1Q13547 482 aaPredicted RBP19.75■□□□□ 0.75
MBD1-205ENST00000353909 ESCO1Q5FWF5 840 aa19.75■□□□□ 0.75
MBD1-205ENST00000353909 IGSF1Q8N6C5 1336 aa19.75■□□□□ 0.75
MBD1-205ENST00000353909 ZBTB7BO15156 539 aaPredicted RBP19.74■□□□□ 0.75
MBD1-205ENST00000353909 KDRP35968 1356 aa19.74■□□□□ 0.75
MBD1-205ENST00000353909 PLEKHG5O94827 1062 aa19.74■□□□□ 0.75
MBD1-205ENST00000353909 BCL11AQ9H165 835 aa19.73■□□□□ 0.75
MBD1-205ENST00000353909 USP19O94966 1318 aa19.73■□□□□ 0.75
MBD1-205ENST00000353909 XPCQ01831 940 aaPredicted RBP19.72■□□□□ 0.75
MBD1-205ENST00000353909 ARHGAP45Q92619 1136 aa19.72■□□□□ 0.75
MBD1-205ENST00000353909 CRB1P82279 1406 aa19.72■□□□□ 0.75
MBD1-205ENST00000353909 USHBP1Q8N6Y0 703 aa19.71■□□□□ 0.75
MBD1-205ENST00000353909 ORAI2Q96SN7 254 aa19.71■□□□□ 0.75
MBD1-205ENST00000353909 SMC5Q8IY18 1101 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms