RNA–Protein interactions for RNA: ENST00000343742.6

LRRK2-202, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 5 BASIC

Gene LRRK2, Length 4,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-202ENST00000343742 FAM177BA6PVY3 158 aa15.36■□□□□ 0.05
LRRK2-202ENST00000343742 IFIT2P09913 472 aaKnown RBP15.36■□□□□ 0.05
LRRK2-202ENST00000343742 CABLES1Q8TDN4 633 aa15.36■□□□□ 0.05
LRRK2-202ENST00000343742 CHD1LQ86WJ1 897 aa15.36■□□□□ 0.05
LRRK2-202ENST00000343742 PRDM15P57071 1507 aaPredicted RBP15.36■□□□□ 0.05
LRRK2-202ENST00000343742 KDM5CP41229 1560 aa15.36■□□□□ 0.05
LRRK2-202ENST00000343742 NEO1Q92859 1461 aa15.36■□□□□ 0.05
LRRK2-202ENST00000343742 MAP4K4O95819 1239 aaPredicted RBP15.35■□□□□ 0.05
LRRK2-202ENST00000343742 AAMPQ13685 434 aa15.35■□□□□ 0.05
LRRK2-202ENST00000343742 GNAI2P04899 355 aa15.35■□□□□ 0.05
LRRK2-202ENST00000343742 GTF2E1P29083 439 aaPredicted RBP15.35■□□□□ 0.05
LRRK2-202ENST00000343742 KRT28Q7Z3Y7 464 aa15.35■□□□□ 0.05
LRRK2-202ENST00000343742 TSPOAP1O95153 1857 aa15.35■□□□□ 0.05
LRRK2-202ENST00000343742 NUTM2BA6NNL0 878 aaPredicted RBP15.35■□□□□ 0.05
LRRK2-202ENST00000343742 NUTM2EB1AL46 878 aaPredicted RBP15.35■□□□□ 0.05
LRRK2-202ENST00000343742 NUTM2AQ8IVF1 878 aaPredicted RBP15.35■□□□□ 0.05
LRRK2-202ENST00000343742 LRRC59Q96AG4 307 aaKnown RBP15.35■□□□□ 0.05
LRRK2-202ENST00000343742 SIL1Q9H173 461 aa15.35■□□□□ 0.05
LRRK2-202ENST00000343742 G3BP1Q13283 466 aaKnown RBP eCLIP15.35■□□□□ 0.05
LRRK2-202ENST00000343742 PIK3C2GO75747 1445 aa15.34■□□□□ 0.05
LRRK2-202ENST00000343742 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
LRRK2-202ENST00000343742 NINLQ9Y2I6 1382 aa15.34■□□□□ 0.05
LRRK2-202ENST00000343742 GNAI3P08754 354 aa15.34■□□□□ 0.05
LRRK2-202ENST00000343742 ST18O60284 1047 aa15.34■□□□□ 0.05
LRRK2-202ENST00000343742 DIAPH3Q9NSV4 1193 aa15.34■□□□□ 0.05
LRRK2-202ENST00000343742 PTCD1O75127 700 aaKnown RBP15.34■□□□□ 0.05
LRRK2-202ENST00000343742 ZFYVE16Q7Z3T8 1539 aa15.33■□□□□ 0.05
LRRK2-202ENST00000343742 CDC42BPBQ9Y5S2 1711 aa15.33■□□□□ 0.05
LRRK2-202ENST00000343742 GBP4Q96PP9 640 aa15.33■□□□□ 0.05
LRRK2-202ENST00000343742 KCNH5Q8NCM2 988 aa15.33■□□□□ 0.04
LRRK2-202ENST00000343742 SRCIN1Q9C0H9 1055 aa15.32■□□□□ 0.04
LRRK2-202ENST00000343742 CABP4P57796 275 aa15.32■□□□□ 0.04
LRRK2-202ENST00000343742 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
LRRK2-202ENST00000343742 MAP3K19Q56UN5 1328 aa15.32■□□□□ 0.04
LRRK2-202ENST00000343742 TAF7Q15545 349 aaPredicted RBP15.32■□□□□ 0.04
LRRK2-202ENST00000343742 GCC1Q96CN9 775 aa15.32■□□□□ 0.04
LRRK2-202ENST00000343742 METP08581 1390 aa15.32■□□□□ 0.04
LRRK2-202ENST00000343742 MTHFSDQ2M296 383 aaKnown RBP15.31■□□□□ 0.04
LRRK2-202ENST00000343742 ABCC11Q96J66 1382 aa15.31■□□□□ 0.04
LRRK2-202ENST00000343742 NFKBIBQ15653 356 aa15.31■□□□□ 0.04
LRRK2-202ENST00000343742 ORAI2Q96SN7 254 aa15.31■□□□□ 0.04
LRRK2-202ENST00000343742 PIP4K2BP78356 416 aa15.31■□□□□ 0.04
LRRK2-202ENST00000343742 ADCY10Q96PN6 1610 aa15.31■□□□□ 0.04
LRRK2-202ENST00000343742 SRGAP3O43295 1099 aa15.31■□□□□ 0.04
LRRK2-202ENST00000343742 REC8O95072 547 aa15.31■□□□□ 0.04
LRRK2-202ENST00000343742 KDM5DQ9BY66 1539 aa15.3■□□□□ 0.04
LRRK2-202ENST00000343742 CDC45O75419 566 aa15.3■□□□□ 0.04
LRRK2-202ENST00000343742 PTMAP06454 111 aaKnown RBP15.3■□□□□ 0.04
LRRK2-202ENST00000343742 INTS3Q68E01 1043 aaKnown RBP15.3■□□□□ 0.04
LRRK2-202ENST00000343742 EYA1Q99502 592 aa15.3■□□□□ 0.04
LRRK2-202ENST00000343742 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
LRRK2-202ENST00000343742 MLH3Q9UHC1 1453 aa15.3■□□□□ 0.04
LRRK2-202ENST00000343742 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
LRRK2-202ENST00000343742 GOLGA6L4A6NEF3 574 aa15.3■□□□□ 0.04
LRRK2-202ENST00000343742 PUS7Q96PZ0 661 aaKnown RBP15.3■□□□□ 0.04
LRRK2-202ENST00000343742 ERVK-7P63135 1459 aa15.3■□□□□ 0.04
LRRK2-202ENST00000343742 CCT4P50991 539 aaKnown RBP15.29■□□□□ 0.04
LRRK2-202ENST00000343742 DDX17Q92841 729 aaKnown RBP15.29■□□□□ 0.04
LRRK2-202ENST00000343742 FRAT2O75474 233 aaPredicted RBP15.29■□□□□ 0.04
LRRK2-202ENST00000343742 TRIM35Q9UPQ4 493 aa15.29■□□□□ 0.04
LRRK2-202ENST00000343742 CCDC85AQ96PX6 553 aaPredicted RBP15.29■□□□□ 0.04
LRRK2-202ENST00000343742 HSP90B1P14625 803 aaKnown RBP15.29■□□□□ 0.04
LRRK2-202ENST00000343742 TBX22Q9Y458 520 aa15.28■□□□□ 0.04
LRRK2-202ENST00000343742 TSHZ3Q63HK5 1081 aa15.28■□□□□ 0.04
LRRK2-202ENST00000343742 TRPM2O94759 1503 aa15.28■□□□□ 0.04
LRRK2-202ENST00000343742 BCORL1Q5H9F3 1711 aa15.28■□□□□ 0.04
LRRK2-202ENST00000343742 CLASRPQ8N2M8 674 aaKnown RBP15.27■□□□□ 0.04
LRRK2-202ENST00000343742 ANKRD24Q8TF21 1146 aa15.27■□□□□ 0.04
LRRK2-202ENST00000343742 VAMP4O75379 141 aa15.27■□□□□ 0.03
LRRK2-202ENST00000343742 CCDC27Q2M243 656 aa15.27■□□□□ 0.03
LRRK2-202ENST00000343742 SPG7Q9UQ90 795 aa15.27■□□□□ 0.03
LRRK2-202ENST00000343742 TMEM2Q9UHN6 1383 aa15.27■□□□□ 0.03
LRRK2-202ENST00000343742 PIP4K2AP48426 406 aaPredicted RBP15.26■□□□□ 0.03
LRRK2-202ENST00000343742 FLIIQ13045 1269 aa15.26■□□□□ 0.03
LRRK2-202ENST00000343742 NUTM1Q86Y26 1132 aa15.26■□□□□ 0.03
LRRK2-202ENST00000343742 IL13P35225 146 aa15.26■□□□□ 0.03
LRRK2-202ENST00000343742 JARID2Q92833 1246 aaPredicted RBP15.26■□□□□ 0.03
LRRK2-202ENST00000343742 MEIS3Q99687 375 aa15.26■□□□□ 0.03
LRRK2-202ENST00000343742 TOMM22Q9NS69 142 aa15.26■□□□□ 0.03
LRRK2-202ENST00000343742 SLC39A6Q13433 755 aa15.25■□□□□ 0.03
LRRK2-202ENST00000343742 LRRCC1Q9C099 1032 aa15.25■□□□□ 0.03
LRRK2-202ENST00000343742 NPC1L1Q9UHC9 1359 aa15.25■□□□□ 0.03
LRRK2-202ENST00000343742 LRRFIP2Q9Y608 721 aaKnown RBP15.25■□□□□ 0.03
LRRK2-202ENST00000343742 ADAMTS2O95450 1211 aa15.24■□□□□ 0.03
LRRK2-202ENST00000343742 NEK4P51957 841 aa15.23■□□□□ 0.03
LRRK2-202ENST00000343742 ZRSR1Q15695 479 aaKnown RBP15.23■□□□□ 0.03
LRRK2-202ENST00000343742 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
LRRK2-202ENST00000343742 RPAP2Q8IXW5 612 aaPredicted RBP15.23■□□□□ 0.03
LRRK2-202ENST00000343742 CLASP1Q7Z460 1538 aa15.23■□□□□ 0.03
LRRK2-202ENST00000343742 PI4KAP2A4QPH2 592 aa15.22■□□□□ 0.03
LRRK2-202ENST00000343742 GCP02774 474 aa15.22■□□□□ 0.03
LRRK2-202ENST00000343742 GSE1Q14687 1217 aa15.22■□□□□ 0.03
LRRK2-202ENST00000343742 PI4KAP1Q8N8J0 262 aa15.22■□□□□ 0.03
LRRK2-202ENST00000343742 DNAJC2Q99543 621 aaKnown RBP15.22■□□□□ 0.03
LRRK2-202ENST00000343742 DDX49Q9Y6V7 483 aaKnown RBP15.22■□□□□ 0.03
LRRK2-202ENST00000343742 IL16Q14005 1332 aa15.22■□□□□ 0.03
LRRK2-202ENST00000343742 MRPL50Q8N5N7 158 aaKnown RBP15.22■□□□□ 0.03
LRRK2-202ENST00000343742 TTC21AQ8NDW8 1320 aa15.22■□□□□ 0.03
LRRK2-202ENST00000343742 CHMP5Q9NZZ3 219 aa15.22■□□□□ 0.03
LRRK2-202ENST00000343742 HSP90AB4PQ58FF6 505 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms