RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 CANXP27824 592 aaKnown RBP24.92■■□□□ 1.58
CHMP6-201ENST00000325167 FBLN1P23142 703 aa24.91■■□□□ 1.58
CHMP6-201ENST00000325167 RRS1Q15050 365 aaKnown RBP24.91■■□□□ 1.58
CHMP6-201ENST00000325167 PMFBP1Q8TBY8 1022 aa24.91■■□□□ 1.58
CHMP6-201ENST00000325167 FANCIQ9NVI1 1328 aa24.9■■□□□ 1.58
CHMP6-201ENST00000325167 ADGRL3Q9HAR2 1447 aa24.89■■□□□ 1.58
CHMP6-201ENST00000325167 MS4A1P11836 297 aa24.89■■□□□ 1.58
CHMP6-201ENST00000325167 ILDR2Q71H61 639 aa24.88■■□□□ 1.57
CHMP6-201ENST00000325167 KIF24Q5T7B8 1368 aa24.88■■□□□ 1.57
CHMP6-201ENST00000325167 TCERG1O14776 1098 aaKnown RBP24.88■■□□□ 1.57
CHMP6-201ENST00000325167 CENPQQ7L2Z9 268 aaPredicted RBP24.88■■□□□ 1.57
CHMP6-201ENST00000325167 USP54Q70EL1 1684 aa24.87■■□□□ 1.57
CHMP6-201ENST00000325167 ZNF428Q96B54 188 aa24.87■■□□□ 1.57
CHMP6-201ENST00000325167 RGPD8O14715 1765 aaPredicted RBP24.86■■□□□ 1.57
CHMP6-201ENST00000325167 HMOX1P09601 288 aa24.85■■□□□ 1.57
CHMP6-201ENST00000325167 SBNO1A3KN83 1393 aa24.85■■□□□ 1.57
CHMP6-201ENST00000325167 FLT4P35916 1363 aa24.84■■□□□ 1.57
CHMP6-201ENST00000325167 EIF4A2Q14240 407 aaKnown RBP24.84■■□□□ 1.57
CHMP6-201ENST00000325167 PHF8Q9UPP1 1060 aa24.82■■□□□ 1.56
CHMP6-201ENST00000325167 PIK3C2AO00443 1686 aa24.82■■□□□ 1.56
CHMP6-201ENST00000325167 MED1Q15648 1581 aaPredicted RBP24.82■■□□□ 1.56
CHMP6-201ENST00000325167 ARHGEF10O15013 1369 aa24.82■■□□□ 1.56
CHMP6-201ENST00000325167 MSH6P52701 1360 aa24.82■■□□□ 1.56
CHMP6-201ENST00000325167 KDM2BQ8NHM5 1336 aa24.81■■□□□ 1.56
CHMP6-201ENST00000325167 GNAI1P63096 354 aa24.81■■□□□ 1.56
CHMP6-201ENST00000325167 EXOSC9Q06265 439 aaKnown RBP24.81■■□□□ 1.56
CHMP6-201ENST00000325167 PHACTR3Q96KR7 559 aa24.81■■□□□ 1.56
CHMP6-201ENST00000325167 IFT57Q9NWB7 429 aa24.81■■□□□ 1.56
CHMP6-201ENST00000325167 ROBO1Q9Y6N7 1651 aa24.79■■□□□ 1.56
CHMP6-201ENST00000325167 FRAT1Q92837 279 aaPredicted RBP24.79■■□□□ 1.56
CHMP6-201ENST00000325167 TSR2Q969E8 191 aaKnown RBP24.79■■□□□ 1.56
CHMP6-201ENST00000325167 MAP3K19Q56UN5 1328 aa24.79■■□□□ 1.56
CHMP6-201ENST00000325167 NLRP6P59044 892 aa24.78■■□□□ 1.56
CHMP6-201ENST00000325167 ALDH1L2Q3SY69 923 aa24.78■■□□□ 1.56
CHMP6-201ENST00000325167 ZKSCAN2Q63HK3 967 aa24.78■■□□□ 1.56
CHMP6-201ENST00000325167 PEAK1Q9H792 1746 aa24.78■■□□□ 1.56
CHMP6-201ENST00000325167 RGPD1P0DJD0 1748 aa24.78■■□□□ 1.56
CHMP6-201ENST00000325167 C14orf37Q86TY3 774 aa24.78■■□□□ 1.56
CHMP6-201ENST00000325167 AMPHP49418 695 aa24.76■■□□□ 1.55
CHMP6-201ENST00000325167 KIF16BQ96L93 1317 aa24.76■■□□□ 1.55
CHMP6-201ENST00000325167 SULT6B1Q6IMI4 303 aa24.75■■□□□ 1.55
CHMP6-201ENST00000325167 CLUAP1Q96AJ1 413 aa24.75■■□□□ 1.55
CHMP6-201ENST00000325167 SMC4Q9NTJ3 1288 aa24.75■■□□□ 1.55
CHMP6-201ENST00000325167 HSP90AB2PQ58FF8 381 aa24.75■■□□□ 1.55
CHMP6-201ENST00000325167 RTL1A6NKG5 1358 aa24.74■■□□□ 1.55
CHMP6-201ENST00000325167 IPO8O15397 1037 aaKnown RBP24.74■■□□□ 1.55
CHMP6-201ENST00000325167 ABTB2Q8N961 1025 aa24.74■■□□□ 1.55
CHMP6-201ENST00000325167 BRPF1P55201 1214 aaPredicted RBP24.73■■□□□ 1.55
CHMP6-201ENST00000325167 SLAIN2Q9P270 581 aa24.73■■□□□ 1.55
CHMP6-201ENST00000325167 ZNF853P0CG23 659 aa24.72■■□□□ 1.55
CHMP6-201ENST00000325167 PANK1Q8TE04 598 aa24.72■■□□□ 1.55
CHMP6-201ENST00000325167 CFAP44Q96MT7 982 aa24.72■■□□□ 1.55
CHMP6-201ENST00000325167 HAP1P54257 671 aaPredicted RBP24.72■■□□□ 1.55
CHMP6-201ENST00000325167 COG6Q9Y2V7 657 aa24.72■■□□□ 1.55
CHMP6-201ENST00000325167 FTSJ3Q8IY81 847 aaKnown RBP24.71■■□□□ 1.55
CHMP6-201ENST00000325167 DZIP1LQ8IYY4 767 aaKnown RBP24.71■■□□□ 1.55
CHMP6-201ENST00000325167 KDRP35968 1356 aa24.7■■□□□ 1.55
CHMP6-201ENST00000325167 NCOA3Q9Y6Q9 1424 aa24.7■■□□□ 1.54
CHMP6-201ENST00000325167 PAK3O75914 559 aaPredicted RBP24.69■■□□□ 1.54
CHMP6-201ENST00000325167 SSH1Q8WYL5 1049 aa24.69■■□□□ 1.54
CHMP6-201ENST00000325167 BCL2L13Q9BXK5 485 aa24.69■■□□□ 1.54
CHMP6-201ENST00000325167 PSME1Q06323 249 aa24.69■■□□□ 1.54
CHMP6-201ENST00000325167 ESCO1Q5FWF5 840 aa24.69■■□□□ 1.54
CHMP6-201ENST00000325167 IGSF1Q8N6C5 1336 aa24.68■■□□□ 1.54
CHMP6-201ENST00000325167 DLG5Q8TDM6 1919 aa24.68■■□□□ 1.54
CHMP6-201ENST00000325167 SOX12O15370 315 aa24.68■■□□□ 1.54
CHMP6-201ENST00000325167 MVPQ14764 893 aaKnown RBP24.68■■□□□ 1.54
CHMP6-201ENST00000325167 MARF1Q9Y4F3 1742 aaKnown RBP24.68■■□□□ 1.54
CHMP6-201ENST00000325167 ATF7IPQ6VMQ6 1270 aa24.67■■□□□ 1.54
CHMP6-201ENST00000325167 AEBP1Q8IUX7 1158 aa24.67■■□□□ 1.54
CHMP6-201ENST00000325167 KCNH5Q8NCM2 988 aa24.67■■□□□ 1.54
CHMP6-201ENST00000325167 C19orf44Q9H6X5 657 aa24.67■■□□□ 1.54
CHMP6-201ENST00000325167 LAS1LQ9Y4W2 734 aaKnown RBP24.67■■□□□ 1.54
CHMP6-201ENST00000325167 ATF3P18847 181 aa24.65■■□□□ 1.54
CHMP6-201ENST00000325167 HOXC9P31274 260 aa24.65■■□□□ 1.54
CHMP6-201ENST00000325167 GAS2L2Q8NHY3 880 aa24.65■■□□□ 1.54
CHMP6-201ENST00000325167 KIF1AQ12756 1690 aa24.64■■□□□ 1.54
CHMP6-201ENST00000325167 CHMP4BQ9H444 224 aaKnown RBP24.64■■□□□ 1.53
CHMP6-201ENST00000325167 MBIPQ9NS73 344 aa24.64■■□□□ 1.53
CHMP6-201ENST00000325167 DDX19BQ9UMR2 479 aa24.64■■□□□ 1.53
CHMP6-201ENST00000325167 PHLPP1O60346 1717 aa24.64■■□□□ 1.53
CHMP6-201ENST00000325167 CADPS2Q86UW7 1296 aa24.63■■□□□ 1.53
CHMP6-201ENST00000325167 ARHGAP45Q92619 1136 aa24.63■■□□□ 1.53
CHMP6-201ENST00000325167 HTATSF1O43719 755 aaKnown RBP24.62■■□□□ 1.53
CHMP6-201ENST00000325167 RLBP1P12271 317 aa24.62■■□□□ 1.53
CHMP6-201ENST00000325167 DCCP43146 1447 aa24.62■■□□□ 1.53
CHMP6-201ENST00000325167 VAMP4O75379 141 aa24.62■■□□□ 1.53
CHMP6-201ENST00000325167 TRIM27P14373 513 aa24.62■■□□□ 1.53
CHMP6-201ENST00000325167 THUMPD2Q9BTF0 503 aaKnown RBP24.62■■□□□ 1.53
CHMP6-201ENST00000325167 EYA1Q99502 592 aa24.61■■□□□ 1.53
CHMP6-201ENST00000325167 NOB1Q9ULX3 412 aaKnown RBP24.61■■□□□ 1.53
CHMP6-201ENST00000325167 SOCS7O14512 581 aa24.6■■□□□ 1.53
CHMP6-201ENST00000325167 RWDD1Q9H446 243 aaPredicted RBP24.59■■□□□ 1.53
CHMP6-201ENST00000325167 NFAT5O94916 1531 aa24.59■■□□□ 1.53
CHMP6-201ENST00000325167 PHRF1Q9P1Y6 1649 aaKnown RBP24.59■■□□□ 1.53
CHMP6-201ENST00000325167 TWISTNBQ3B726 338 aaPredicted RBP24.59■■□□□ 1.53
CHMP6-201ENST00000325167 RTF1Q92541 710 aaKnown RBP24.59■■□□□ 1.53
CHMP6-201ENST00000325167 IP6K1Q92551 441 aa24.59■■□□□ 1.53
CHMP6-201ENST00000325167 KIAA0232Q92628 1395 aa24.58■■□□□ 1.53
CHMP6-201ENST00000325167 PDE4AP27815 886 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms