RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 AMOTL2Q9Y2J4 779 aa18.62■□□□□ 0.57
GCFC2-201ENST00000321027 GNAI2P04899 355 aa18.62■□□□□ 0.57
GCFC2-201ENST00000321027 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.62■□□□□ 0.57
GCFC2-201ENST00000321027 RBM33Q96EV2 1170 aaKnown RBP18.62■□□□□ 0.57
GCFC2-201ENST00000321027 GOLGA6L19H0YKK7 550 aa18.62■□□□□ 0.57
GCFC2-201ENST00000321027 DDX58O95786 925 aaKnown RBP18.62■□□□□ 0.57
GCFC2-201ENST00000321027 ESPNB1AK53 854 aa18.61■□□□□ 0.57
GCFC2-201ENST00000321027 CARD14Q9BXL6 1004 aa18.61■□□□□ 0.57
GCFC2-201ENST00000321027 PPP6R1Q9UPN7 881 aa18.61■□□□□ 0.57
GCFC2-201ENST00000321027 ERC2O15083 957 aa18.61■□□□□ 0.57
GCFC2-201ENST00000321027 SMARCA5O60264 1052 aaPredicted RBP18.61■□□□□ 0.57
GCFC2-201ENST00000321027 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
GCFC2-201ENST00000321027 ARHGEF12Q9NZN5 1544 aa18.61■□□□□ 0.57
GCFC2-201ENST00000321027 G3BP1Q13283 466 aaKnown RBP eCLIP18.6■□□□□ 0.57
GCFC2-201ENST00000321027 MCM10Q7L590 875 aa18.6■□□□□ 0.57
GCFC2-201ENST00000321027 CIZ1Q9ULV3 898 aaPredicted RBP18.6■□□□□ 0.57
GCFC2-201ENST00000321027 EXOC6BQ9Y2D4 811 aa18.6■□□□□ 0.57
GCFC2-201ENST00000321027 PES1O00541 588 aaKnown RBP18.59■□□□□ 0.57
GCFC2-201ENST00000321027 BICD2Q8TD16 824 aa18.59■□□□□ 0.57
GCFC2-201ENST00000321027 SPATA31E1Q6ZUB1 1445 aa18.59■□□□□ 0.57
GCFC2-201ENST00000321027 MAP4K4O95819 1239 aaPredicted RBP18.58■□□□□ 0.57
GCFC2-201ENST00000321027 PLEKHO1Q53GL0 409 aaPredicted RBP18.58■□□□□ 0.57
GCFC2-201ENST00000321027 NOC3LQ8WTT2 800 aaKnown RBP18.58■□□□□ 0.57
GCFC2-201ENST00000321027 FOSBP53539 338 aa18.58■□□□□ 0.57
GCFC2-201ENST00000321027 PDE4CQ08493 712 aa18.58■□□□□ 0.57
GCFC2-201ENST00000321027 IL1RAPL2Q9NP60 686 aa18.58■□□□□ 0.57
GCFC2-201ENST00000321027 HDGFL1Q5TGJ6 251 aa18.58■□□□□ 0.56
GCFC2-201ENST00000321027 FIBPO43427 364 aa18.58■□□□□ 0.56
GCFC2-201ENST00000321027 SYTL4Q96C24 671 aaPredicted RBP18.58■□□□□ 0.56
GCFC2-201ENST00000321027 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
GCFC2-201ENST00000321027 CLASRPQ8N2M8 674 aaKnown RBP18.57■□□□□ 0.56
GCFC2-201ENST00000321027 TNPO1Q92973 898 aaKnown RBP18.57■□□□□ 0.56
GCFC2-201ENST00000321027 MBD3O95983 291 aa18.57■□□□□ 0.56
GCFC2-201ENST00000321027 ZNF530Q6P9A1 599 aaPredicted RBP18.57■□□□□ 0.56
GCFC2-201ENST00000321027 FYB1O15117 783 aa18.56■□□□□ 0.56
GCFC2-201ENST00000321027 CCDC173Q0VFZ6 552 aa18.56■□□□□ 0.56
GCFC2-201ENST00000321027 UHRF1BP1Q6BDS2 1440 aa18.56■□□□□ 0.56
GCFC2-201ENST00000321027 HSP90AB4PQ58FF6 505 aa18.56■□□□□ 0.56
GCFC2-201ENST00000321027 RIC3Q7Z5B4 369 aa18.56■□□□□ 0.56
GCFC2-201ENST00000321027 CCAR2Q8N163 923 aaKnown RBP18.56■□□□□ 0.56
GCFC2-201ENST00000321027 LRRCC1Q9C099 1032 aa18.56■□□□□ 0.56
GCFC2-201ENST00000321027 SSFA2P28290 1259 aa18.56■□□□□ 0.56
GCFC2-201ENST00000321027 TNNT3P45378 269 aaPredicted RBP18.56■□□□□ 0.56
GCFC2-201ENST00000321027 ALDH1L2Q3SY69 923 aa18.56■□□□□ 0.56
GCFC2-201ENST00000321027 ZNF592Q92610 1267 aa18.56■□□□□ 0.56
GCFC2-201ENST00000321027 RPAP2Q8IXW5 612 aaPredicted RBP18.55■□□□□ 0.56
GCFC2-201ENST00000321027 ASXL1Q8IXJ9 1541 aa18.55■□□□□ 0.56
GCFC2-201ENST00000321027 TPM3P06753 285 aa18.54■□□□□ 0.56
GCFC2-201ENST00000321027 RNF20Q5VTR2 975 aa18.54■□□□□ 0.56
GCFC2-201ENST00000321027 FBXW7Q969H0 707 aa18.54■□□□□ 0.56
GCFC2-201ENST00000321027 UPF3BQ9BZI7 483 aaKnown RBP18.54■□□□□ 0.56
GCFC2-201ENST00000321027 BCL11BQ9C0K0 894 aaPredicted RBP18.54■□□□□ 0.56
GCFC2-201ENST00000321027 CWC22Q9HCG8 908 aaKnown RBP18.54■□□□□ 0.56
GCFC2-201ENST00000321027 CCT4P50991 539 aaKnown RBP18.54■□□□□ 0.56
GCFC2-201ENST00000321027 RBM10P98175 930 aaKnown RBP18.54■□□□□ 0.56
GCFC2-201ENST00000321027 CNTROBQ8N137 903 aa18.54■□□□□ 0.56
GCFC2-201ENST00000321027 MBD5Q9P267 1494 aa18.54■□□□□ 0.56
GCFC2-201ENST00000321027 MCM2P49736 904 aa18.54■□□□□ 0.56
GCFC2-201ENST00000321027 FAM83GA6ND36 823 aa18.53■□□□□ 0.56
GCFC2-201ENST00000321027 F6X3S4 739 aa18.53■□□□□ 0.56
GCFC2-201ENST00000321027 TBC1D9Q6ZT07 1266 aa18.53■□□□□ 0.56
GCFC2-201ENST00000321027 KDM6BO15054 1643 aa18.53■□□□□ 0.56
GCFC2-201ENST00000321027 NSD2O96028 1365 aa18.53■□□□□ 0.56
GCFC2-201ENST00000321027 ABCC11Q96J66 1382 aa18.53■□□□□ 0.56
GCFC2-201ENST00000321027 ZC3H6P61129 1189 aaKnown RBP18.52■□□□□ 0.56
GCFC2-201ENST00000321027 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.52■□□□□ 0.55
GCFC2-201ENST00000321027 CPLX2Q6PUV4 134 aaKnown RBP18.51■□□□□ 0.55
GCFC2-201ENST00000321027 CCDC39Q9UFE4 941 aa18.51■□□□□ 0.55
GCFC2-201ENST00000321027 IFT57Q9NWB7 429 aa18.51■□□□□ 0.55
GCFC2-201ENST00000321027 ANKRD36BQ8N2N9 1353 aa18.51■□□□□ 0.55
GCFC2-201ENST00000321027 TNRQ92752 1358 aa18.51■□□□□ 0.55
GCFC2-201ENST00000321027 TSPY26PQ9H489 355 aa18.51■□□□□ 0.55
GCFC2-201ENST00000321027 CPLX1O14810 134 aa18.5■□□□□ 0.55
GCFC2-201ENST00000321027 FOXO3O43524 673 aa18.5■□□□□ 0.55
GCFC2-201ENST00000321027 APPP05067 770 aa18.5■□□□□ 0.55
GCFC2-201ENST00000321027 TPD52L1Q16890 204 aaPredicted RBP18.5■□□□□ 0.55
GCFC2-201ENST00000321027 GOLGA6L1Q8N7Z2 621 aa18.5■□□□□ 0.55
GCFC2-201ENST00000321027 FSD1Q9BTV5 496 aa18.5■□□□□ 0.55
GCFC2-201ENST00000321027 MARCH6O60337 910 aa18.5■□□□□ 0.55
GCFC2-201ENST00000321027 BMP2KLQ5H9B9 411 aa18.5■□□□□ 0.55
GCFC2-201ENST00000321027 PANK2Q9BZ23 570 aa18.5■□□□□ 0.55
GCFC2-201ENST00000321027 ABCA8O94911 1581 aa18.49■□□□□ 0.55
GCFC2-201ENST00000321027 KDM2BQ8NHM5 1336 aa18.49■□□□□ 0.55
GCFC2-201ENST00000321027 ACEP12821 1306 aa18.49■□□□□ 0.55
GCFC2-201ENST00000321027 SRGAP3O43295 1099 aa18.49■□□□□ 0.55
GCFC2-201ENST00000321027 AKAP17AQ02040 695 aaKnown RBP18.49■□□□□ 0.55
GCFC2-201ENST00000321027 NEUROD6Q96NK8 337 aa18.49■□□□□ 0.55
GCFC2-201ENST00000321027 GCC2Q8IWJ2 1684 aa18.48■□□□□ 0.55
GCFC2-201ENST00000321027 SYCE3A1L190 88 aa18.48■□□□□ 0.55
GCFC2-201ENST00000321027 HDAC1Q13547 482 aaPredicted RBP18.48■□□□□ 0.55
GCFC2-201ENST00000321027 SRCIN1Q9C0H9 1055 aa18.48■□□□□ 0.55
GCFC2-201ENST00000321027 MBIPQ9NS73 344 aa18.48■□□□□ 0.55
GCFC2-201ENST00000321027 PHF8Q9UPP1 1060 aa18.48■□□□□ 0.55
GCFC2-201ENST00000321027 COL17A1Q9UMD9 1497 aaPredicted RBP18.48■□□□□ 0.55
GCFC2-201ENST00000321027 ATP7AQ04656 1500 aa18.48■□□□□ 0.55
GCFC2-201ENST00000321027 TATP17735 454 aaPredicted RBP18.48■□□□□ 0.55
GCFC2-201ENST00000321027 USHBP1Q8N6Y0 703 aa18.48■□□□□ 0.55
GCFC2-201ENST00000321027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.48■□□□□ 0.55
GCFC2-201ENST00000321027 RBM42Q9BTD8 480 aaKnown RBP18.48■□□□□ 0.55
GCFC2-201ENST00000321027 UHRF1BP1LA0JNW5 1464 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms