RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 MARF1Q9Y4F3 1742 aaKnown RBP28.71■■■□□ 2.19
NHLH1-201ENST00000302101 MAP3K19Q56UN5 1328 aa28.7■■■□□ 2.19
NHLH1-201ENST00000302101 FOXO3O43524 673 aa28.7■■■□□ 2.18
NHLH1-201ENST00000302101 WDR63Q8IWG1 891 aa28.7■■■□□ 2.18
NHLH1-201ENST00000302101 HSP90AB2PQ58FF8 381 aa28.69■■■□□ 2.18
NHLH1-201ENST00000302101 NBR1Q14596 966 aa28.69■■■□□ 2.18
NHLH1-201ENST00000302101 ATF3P18847 181 aa28.68■■■□□ 2.18
NHLH1-201ENST00000302101 EIF4A2Q14240 407 aaKnown RBP28.68■■■□□ 2.18
NHLH1-201ENST00000302101 C1orf167Q5SNV9 1468 aa28.68■■■□□ 2.18
NHLH1-201ENST00000302101 USP54Q70EL1 1684 aa28.67■■■□□ 2.18
NHLH1-201ENST00000302101 PLIN1O60240 522 aa28.67■■■□□ 2.18
NHLH1-201ENST00000302101 NEFMP07197 916 aa28.67■■■□□ 2.18
NHLH1-201ENST00000302101 NCOA3Q9Y6Q9 1424 aa28.66■■■□□ 2.18
NHLH1-201ENST00000302101 RIPK4P57078 832 aa28.65■■■□□ 2.18
NHLH1-201ENST00000302101 XPCQ01831 940 aaPredicted RBP28.65■■■□□ 2.18
NHLH1-201ENST00000302101 PHACTR3Q96KR7 559 aa28.64■■■□□ 2.18
NHLH1-201ENST00000302101 TRIM35Q9UPQ4 493 aa28.64■■■□□ 2.18
NHLH1-201ENST00000302101 AMPHP49418 695 aa28.64■■■□□ 2.18
NHLH1-201ENST00000302101 SBNO1A3KN83 1393 aa28.64■■■□□ 2.17
NHLH1-201ENST00000302101 TCERG1O14776 1098 aaKnown RBP28.63■■■□□ 2.17
NHLH1-201ENST00000302101 ZBTB47Q9UFB7 747 aaPredicted RBP28.63■■■□□ 2.17
NHLH1-201ENST00000302101 FLT4P35916 1363 aa28.63■■■□□ 2.17
NHLH1-201ENST00000302101 DCCP43146 1447 aa28.62■■■□□ 2.17
NHLH1-201ENST00000302101 MST1RQ04912 1400 aa28.61■■■□□ 2.17
NHLH1-201ENST00000302101 KIF1AQ12756 1690 aa28.61■■■□□ 2.17
NHLH1-201ENST00000302101 NPM2Q86SE8 214 aaKnown RBP28.6■■■□□ 2.17
NHLH1-201ENST00000302101 XIRP1Q702N8 1843 aaKnown RBP28.59■■■□□ 2.17
NHLH1-201ENST00000302101 SULT6B1Q6IMI4 303 aa28.58■■■□□ 2.17
NHLH1-201ENST00000302101 CADPS2Q86UW7 1296 aa28.58■■■□□ 2.17
NHLH1-201ENST00000302101 MSH6P52701 1360 aa28.58■■■□□ 2.17
NHLH1-201ENST00000302101 KRT28Q7Z3Y7 464 aa28.57■■■□□ 2.16
NHLH1-201ENST00000302101 AEBP1Q8IUX7 1158 aa28.57■■■□□ 2.16
NHLH1-201ENST00000302101 DEKP35659 375 aaKnown RBP28.57■■■□□ 2.16
NHLH1-201ENST00000302101 CRBNQ96SW2 442 aa28.57■■■□□ 2.16
NHLH1-201ENST00000302101 ZNF335Q9H4Z2 1342 aaPredicted RBP28.57■■■□□ 2.16
NHLH1-201ENST00000302101 NFE2L2Q16236 605 aa28.57■■■□□ 2.16
NHLH1-201ENST00000302101 RGPD1P0DJD0 1748 aa28.56■■■□□ 2.16
NHLH1-201ENST00000302101 MYH16Q9H6N6 1097 aa28.56■■■□□ 2.16
NHLH1-201ENST00000302101 PDE4AP27815 886 aa28.56■■■□□ 2.16
NHLH1-201ENST00000302101 LMOD2Q6P5Q4 547 aa28.55■■■□□ 2.16
NHLH1-201ENST00000302101 LTN1O94822 1766 aa28.54■■■□□ 2.16
NHLH1-201ENST00000302101 HOXC9P31274 260 aa28.54■■■□□ 2.16
NHLH1-201ENST00000302101 TRPM3Q9HCF6 1732 aaPredicted RBP28.54■■■□□ 2.16
NHLH1-201ENST00000302101 KIF24Q5T7B8 1368 aa28.53■■■□□ 2.16
NHLH1-201ENST00000302101 DLG5Q8TDM6 1919 aa28.52■■■□□ 2.16
NHLH1-201ENST00000302101 PLEKHG5O94827 1062 aa28.52■■■□□ 2.16
NHLH1-201ENST00000302101 KCNH5Q8NCM2 988 aa28.51■■■□□ 2.15
NHLH1-201ENST00000302101 NFAT5O94916 1531 aa28.5■■■□□ 2.15
NHLH1-201ENST00000302101 BACH2Q9BYV9 841 aa28.5■■■□□ 2.15
NHLH1-201ENST00000302101 MS4A1P11836 297 aa28.5■■■□□ 2.15
NHLH1-201ENST00000302101 DDX17Q92841 729 aaKnown RBP28.5■■■□□ 2.15
NHLH1-201ENST00000302101 TSR2Q969E8 191 aaKnown RBP28.5■■■□□ 2.15
NHLH1-201ENST00000302101 IL16Q14005 1332 aa28.49■■■□□ 2.15
NHLH1-201ENST00000302101 ARHGEF10O15013 1369 aa28.49■■■□□ 2.15
NHLH1-201ENST00000302101 BCAR3O75815 825 aa28.49■■■□□ 2.15
NHLH1-201ENST00000302101 C20orf194Q5TEA3 1177 aa28.48■■■□□ 2.15
NHLH1-201ENST00000302101 SKAP1Q86WV1 359 aa28.48■■■□□ 2.15
NHLH1-201ENST00000302101 EYA1Q99502 592 aa28.48■■■□□ 2.15
NHLH1-201ENST00000302101 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.47■■■□□ 2.15
NHLH1-201ENST00000302101 GCP02774 474 aa28.46■■■□□ 2.15
NHLH1-201ENST00000302101 RTL1A6NKG5 1358 aa28.46■■■□□ 2.15
NHLH1-201ENST00000302101 ZBTB7CA1YPR0 619 aa28.46■■■□□ 2.15
NHLH1-201ENST00000302101 LTV1Q96GA3 475 aaPredicted RBP28.46■■■□□ 2.15
NHLH1-201ENST00000302101 IGSF1Q8N6C5 1336 aa28.45■■■□□ 2.14
NHLH1-201ENST00000302101 THUMPD2Q9BTF0 503 aaKnown RBP28.45■■■□□ 2.14
NHLH1-201ENST00000302101 IP6K1Q92551 441 aa28.44■■■□□ 2.14
NHLH1-201ENST00000302101 SLIT3O75094 1523 aa28.43■■■□□ 2.14
NHLH1-201ENST00000302101 RTL5Q5HYW3 569 aaPredicted RBP28.43■■■□□ 2.14
NHLH1-201ENST00000302101 ALS2Q96Q42 1657 aa28.43■■■□□ 2.14
NHLH1-201ENST00000302101 NPHP3Q7Z494 1330 aa28.43■■■□□ 2.14
NHLH1-201ENST00000302101 LMOD3Q0VAK6 560 aa28.42■■■□□ 2.14
NHLH1-201ENST00000302101 KDRP35968 1356 aa28.42■■■□□ 2.14
NHLH1-201ENST00000302101 LAS1LQ9Y4W2 734 aaKnown RBP28.41■■■□□ 2.14
NHLH1-201ENST00000302101 USP19O94966 1318 aa28.41■■■□□ 2.14
NHLH1-201ENST00000302101 RARSP54136 660 aaKnown RBP28.41■■■□□ 2.14
NHLH1-201ENST00000302101 EXOSC9Q06265 439 aaKnown RBP28.41■■■□□ 2.14
NHLH1-201ENST00000302101 FAM83GA6ND36 823 aa28.4■■■□□ 2.14
NHLH1-201ENST00000302101 CALD1Q05682 793 aaKnown RBP28.4■■■□□ 2.14
NHLH1-201ENST00000302101 DCTN1Q14203 1278 aa28.38■■■□□ 2.13
NHLH1-201ENST00000302101 ARHGEF25Q86VW2 580 aa28.38■■■□□ 2.13
NHLH1-201ENST00000302101 PHRF1Q9P1Y6 1649 aaKnown RBP28.38■■■□□ 2.13
NHLH1-201ENST00000302101 BRINP3Q76B58 766 aa28.37■■■□□ 2.13
NHLH1-201ENST00000302101 SLAIN2Q9P270 581 aa28.37■■■□□ 2.13
NHLH1-201ENST00000302101 CT47B1P0C2W7 299 aaPredicted RBP28.35■■■□□ 2.13
NHLH1-201ENST00000302101 BCL2L13Q9BXK5 485 aa28.35■■■□□ 2.13
NHLH1-201ENST00000302101 GNAI1P63096 354 aa28.34■■■□□ 2.13
NHLH1-201ENST00000302101 MTHFSDQ2M296 383 aaKnown RBP28.34■■■□□ 2.13
NHLH1-201ENST00000302101 IFT57Q9NWB7 429 aa28.34■■■□□ 2.13
NHLH1-201ENST00000302101 MED1Q15648 1581 aaPredicted RBP28.33■■■□□ 2.13
NHLH1-201ENST00000302101 PXDNQ92626 1479 aa28.33■■■□□ 2.13
NHLH1-201ENST00000302101 CANXP27824 592 aaKnown RBP28.33■■■□□ 2.13
NHLH1-201ENST00000302101 FRAT1Q92837 279 aaPredicted RBP28.33■■■□□ 2.13
NHLH1-201ENST00000302101 USHBP1Q8N6Y0 703 aa28.32■■■□□ 2.12
NHLH1-201ENST00000302101 KDM2BQ8NHM5 1336 aa28.32■■■□□ 2.12
NHLH1-201ENST00000302101 TNS3Q68CZ2 1445 aa28.32■■■□□ 2.12
NHLH1-201ENST00000302101 ZNF853P0CG23 659 aa28.31■■■□□ 2.12
NHLH1-201ENST00000302101 ZC3H6P61129 1189 aaKnown RBP28.3■■■□□ 2.12
NHLH1-201ENST00000302101 NBPF6Q5VWK0 638 aa28.3■■■□□ 2.12
NHLH1-201ENST00000302101 MCM10Q7L590 875 aa28.3■■■□□ 2.12
NHLH1-201ENST00000302101 NBPF4Q96M43 638 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms