RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 POLKQ9UBT6 870 aa19.75■□□□□ 0.75
CHAF1A-201ENST00000301280 TRIM35Q9UPQ4 493 aa19.75■□□□□ 0.75
CHAF1A-201ENST00000301280 CPS1P31327 1500 aa19.75■□□□□ 0.75
CHAF1A-201ENST00000301280 SULT6B1Q6IMI4 303 aa19.75■□□□□ 0.75
CHAF1A-201ENST00000301280 PLEKHF1Q96S99 279 aa19.74■□□□□ 0.75
CHAF1A-201ENST00000301280 BRPF3Q9ULD4 1205 aa19.74■□□□□ 0.75
CHAF1A-201ENST00000301280 TOPAZ1Q8N9V7 1692 aa19.74■□□□□ 0.75
CHAF1A-201ENST00000301280 MVPQ14764 893 aaKnown RBP19.74■□□□□ 0.75
CHAF1A-201ENST00000301280 TPRNQ4KMQ1 711 aa19.74■□□□□ 0.75
CHAF1A-201ENST00000301280 HSP90AA1P07900 732 aaKnown RBP19.73■□□□□ 0.75
CHAF1A-201ENST00000301280 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
CHAF1A-201ENST00000301280 NRKQ7Z2Y5 1582 aa19.73■□□□□ 0.75
CHAF1A-201ENST00000301280 PRKCSHP14314 528 aaPredicted RBP19.72■□□□□ 0.75
CHAF1A-201ENST00000301280 TECPR2O15040 1411 aa19.71■□□□□ 0.75
CHAF1A-201ENST00000301280 ATF7IPQ6VMQ6 1270 aa19.71■□□□□ 0.75
CHAF1A-201ENST00000301280 UBR1Q8IWV7 1749 aa19.71■□□□□ 0.75
CHAF1A-201ENST00000301280 ITSN1Q15811 1721 aa19.71■□□□□ 0.75
CHAF1A-201ENST00000301280 CT47B1P0C2W7 299 aaPredicted RBP19.7■□□□□ 0.74
CHAF1A-201ENST00000301280 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
CHAF1A-201ENST00000301280 NALCNQ8IZF0 1738 aa19.69■□□□□ 0.74
CHAF1A-201ENST00000301280 LRRC7Q96NW7 1537 aa19.69■□□□□ 0.74
CHAF1A-201ENST00000301280 HSP90AB2PQ58FF8 381 aa19.69■□□□□ 0.74
CHAF1A-201ENST00000301280 PPIP5K1Q6PFW1 1433 aa19.69■□□□□ 0.74
CHAF1A-201ENST00000301280 CPSF1Q10570 1443 aaKnown RBP19.68■□□□□ 0.74
CHAF1A-201ENST00000301280 XPCQ01831 940 aaPredicted RBP19.68■□□□□ 0.74
CHAF1A-201ENST00000301280 IL16Q14005 1332 aa19.67■□□□□ 0.74
CHAF1A-201ENST00000301280 FOXO3O43524 673 aa19.67■□□□□ 0.74
CHAF1A-201ENST00000301280 WASLO00401 505 aaPredicted RBP19.66■□□□□ 0.74
CHAF1A-201ENST00000301280 C8orf58Q8NAV2 365 aa19.66■□□□□ 0.74
CHAF1A-201ENST00000301280 BECN1Q14457 450 aa19.65■□□□□ 0.74
CHAF1A-201ENST00000301280 AMPHP49418 695 aa19.65■□□□□ 0.74
CHAF1A-201ENST00000301280 GSE1Q14687 1217 aa19.65■□□□□ 0.74
CHAF1A-201ENST00000301280 TWISTNBQ3B726 338 aaPredicted RBP19.65■□□□□ 0.74
CHAF1A-201ENST00000301280 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.65■□□□□ 0.74
CHAF1A-201ENST00000301280 IPO8O15397 1037 aaKnown RBP19.64■□□□□ 0.74
CHAF1A-201ENST00000301280 FAM135BQ49AJ0 1406 aa19.64■□□□□ 0.73
CHAF1A-201ENST00000301280 USHBP1Q8N6Y0 703 aa19.64■□□□□ 0.73
CHAF1A-201ENST00000301280 RIMS1Q86UR5 1692 aaKnown RBP19.64■□□□□ 0.73
CHAF1A-201ENST00000301280 DDX19BQ9UMR2 479 aa19.64■□□□□ 0.73
CHAF1A-201ENST00000301280 CCDC61Q9Y6R9 512 aa19.63■□□□□ 0.73
CHAF1A-201ENST00000301280 MBIPQ9NS73 344 aa19.63■□□□□ 0.73
CHAF1A-201ENST00000301280 RIMS2Q9UQ26 1411 aa19.63■□□□□ 0.73
CHAF1A-201ENST00000301280 RGPD1P0DJD0 1748 aa19.62■□□□□ 0.73
CHAF1A-201ENST00000301280 F6X3S4 739 aa19.61■□□□□ 0.73
CHAF1A-201ENST00000301280 METP08581 1390 aa19.61■□□□□ 0.73
CHAF1A-201ENST00000301280 CDK12Q9NYV4 1490 aaPredicted RBP19.61■□□□□ 0.73
CHAF1A-201ENST00000301280 SIRT1Q96EB6 747 aa19.61■□□□□ 0.73
CHAF1A-201ENST00000301280 USP19O94966 1318 aa19.6■□□□□ 0.73
CHAF1A-201ENST00000301280 SMARCA5O60264 1052 aaPredicted RBP19.59■□□□□ 0.73
CHAF1A-201ENST00000301280 NLRP6P59044 892 aa19.59■□□□□ 0.73
CHAF1A-201ENST00000301280 NOL8Q76FK4 1167 aaKnown RBP19.59■□□□□ 0.73
CHAF1A-201ENST00000301280 FCHSD2O94868 740 aa19.59■□□□□ 0.73
CHAF1A-201ENST00000301280 NFE2L2Q16236 605 aa19.59■□□□□ 0.73
CHAF1A-201ENST00000301280 PNNQ9H307 717 aaKnown RBP19.58■□□□□ 0.73
CHAF1A-201ENST00000301280 LTKP29376 864 aa19.58■□□□□ 0.72
CHAF1A-201ENST00000301280 C22orf23Q9BZE7 217 aa19.58■□□□□ 0.72
CHAF1A-201ENST00000301280 RSPH6AQ9H0K4 717 aa19.58■□□□□ 0.72
CHAF1A-201ENST00000301280 AATKQ6ZMQ8 1374 aa19.58■□□□□ 0.72
CHAF1A-201ENST00000301280 EDC4Q6P2E9 1401 aaKnown RBP19.58■□□□□ 0.72
CHAF1A-201ENST00000301280 C16orf71Q8IYS4 520 aaPredicted RBP19.58■□□□□ 0.72
CHAF1A-201ENST00000301280 FOXD4L5Q5VV16 416 aaPredicted RBP19.57■□□□□ 0.72
CHAF1A-201ENST00000301280 TSHZ3Q63HK5 1081 aa19.57■□□□□ 0.72
CHAF1A-201ENST00000301280 FOXD4L4Q8WXT5 416 aaPredicted RBP19.57■□□□□ 0.72
CHAF1A-201ENST00000301280 RTF1Q92541 710 aaKnown RBP19.57■□□□□ 0.72
CHAF1A-201ENST00000301280 ACEP12821 1306 aa19.57■□□□□ 0.72
CHAF1A-201ENST00000301280 USP54Q70EL1 1684 aa19.57■□□□□ 0.72
CHAF1A-201ENST00000301280 BRPF1P55201 1214 aaPredicted RBP19.56■□□□□ 0.72
CHAF1A-201ENST00000301280 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.56■□□□□ 0.72
CHAF1A-201ENST00000301280 EIF2S2P20042 333 aaKnown RBP19.56■□□□□ 0.72
CHAF1A-201ENST00000301280 RBM42Q9BTD8 480 aaKnown RBP19.55■□□□□ 0.72
CHAF1A-201ENST00000301280 EID1Q9Y6B2 187 aa19.55■□□□□ 0.72
CHAF1A-201ENST00000301280 TBC1D2Q9BYX2 928 aa19.54■□□□□ 0.72
CHAF1A-201ENST00000301280 AMOTL2Q9Y2J4 779 aa19.54■□□□□ 0.72
CHAF1A-201ENST00000301280 SLC4A2P04920 1241 aa19.53■□□□□ 0.72
CHAF1A-201ENST00000301280 HSP90AB1P08238 724 aaKnown RBP19.53■□□□□ 0.72
CHAF1A-201ENST00000301280 GNAI1P63096 354 aa19.53■□□□□ 0.72
CHAF1A-201ENST00000301280 FMN2Q9NZ56 1722 aa19.53■□□□□ 0.72
CHAF1A-201ENST00000301280 HDGFP51858 240 aaKnown RBP19.53■□□□□ 0.72
CHAF1A-201ENST00000301280 VAMP4O75379 141 aa19.52■□□□□ 0.72
CHAF1A-201ENST00000301280 EIF4A2Q14240 407 aaKnown RBP19.52■□□□□ 0.72
CHAF1A-201ENST00000301280 KIF16BQ96L93 1317 aa19.52■□□□□ 0.71
CHAF1A-201ENST00000301280 FOXD4L6Q3SYB3 417 aaPredicted RBP19.51■□□□□ 0.71
CHAF1A-201ENST00000301280 FOXD4L3Q6VB84 417 aaPredicted RBP19.51■□□□□ 0.71
CHAF1A-201ENST00000301280 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
CHAF1A-201ENST00000301280 PIK3R4Q99570 1358 aa19.51■□□□□ 0.71
CHAF1A-201ENST00000301280 PRR36Q9H6K5 1346 aa19.51■□□□□ 0.71
CHAF1A-201ENST00000301280 EIF5BO60841 1220 aaKnown RBP19.5■□□□□ 0.71
CHAF1A-201ENST00000301280 OTUD7AQ8TE49 926 aaPredicted RBP19.5■□□□□ 0.71
CHAF1A-201ENST00000301280 HSCBQ8IWL3 235 aa19.5■□□□□ 0.71
CHAF1A-201ENST00000301280 ABTB2Q8N961 1025 aa19.5■□□□□ 0.71
CHAF1A-201ENST00000301280 IL13P35225 146 aa19.49■□□□□ 0.71
CHAF1A-201ENST00000301280 CHD1LQ86WJ1 897 aa19.49■□□□□ 0.71
CHAF1A-201ENST00000301280 ANXA1P04083 346 aa19.48■□□□□ 0.71
CHAF1A-201ENST00000301280 PEAK1Q9H792 1746 aa19.48■□□□□ 0.71
CHAF1A-201ENST00000301280 NCLP19338 710 aaKnown RBP19.48■□□□□ 0.71
CHAF1A-201ENST00000301280 ZBTB40Q9NUA8 1239 aa19.48■□□□□ 0.71
CHAF1A-201ENST00000301280 HDAC1Q13547 482 aaPredicted RBP19.47■□□□□ 0.71
CHAF1A-201ENST00000301280 MARF1Q9Y4F3 1742 aaKnown RBP19.47■□□□□ 0.71
CHAF1A-201ENST00000301280 PTCH1Q13635 1447 aa19.47■□□□□ 0.71
CHAF1A-201ENST00000301280 DTNBO60941 627 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms