RNA–Protein interactions for RNA: ENST00000295971.11

RBM47-201, Transcript of RNA binding motif protein 47, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RBM47, Length 4,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-201ENST00000295971 IL1RAPL2Q9NP60 686 aa16.35■□□□□ 0.21
RBM47-201ENST00000295971 SMC3Q9UQE7 1217 aa16.35■□□□□ 0.21
RBM47-201ENST00000295971 HDGFL1Q5TGJ6 251 aa16.35■□□□□ 0.21
RBM47-201ENST00000295971 CCT4P50991 539 aaKnown RBP16.35■□□□□ 0.21
RBM47-201ENST00000295971 TSPYL6Q8N831 410 aa16.35■□□□□ 0.21
RBM47-201ENST00000295971 ABTB2Q8N961 1025 aa16.35■□□□□ 0.21
RBM47-201ENST00000295971 LRRCC1Q9C099 1032 aa16.35■□□□□ 0.21
RBM47-201ENST00000295971 ARHGEF5Q12774 1597 aa16.34■□□□□ 0.21
RBM47-201ENST00000295971 ABCC2Q92887 1545 aa16.34■□□□□ 0.21
RBM47-201ENST00000295971 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
RBM47-201ENST00000295971 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
RBM47-201ENST00000295971 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
RBM47-201ENST00000295971 ASXL2Q76L83 1435 aa16.34■□□□□ 0.21
RBM47-201ENST00000295971 WASLO00401 505 aaPredicted RBP16.34■□□□□ 0.21
RBM47-201ENST00000295971 MAP4K4O95819 1239 aaPredicted RBP16.34■□□□□ 0.21
RBM47-201ENST00000295971 PANK2Q9BZ23 570 aa16.34■□□□□ 0.21
RBM47-201ENST00000295971 PHACTR3Q96KR7 559 aa16.33■□□□□ 0.21
RBM47-201ENST00000295971 ZBTB40Q9NUA8 1239 aa16.33■□□□□ 0.21
RBM47-201ENST00000295971 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.21
RBM47-201ENST00000295971 ABCA8O94911 1581 aa16.33■□□□□ 0.21
RBM47-201ENST00000295971 CFAP65Q6ZU64 1925 aaKnown RBP16.33■□□□□ 0.2
RBM47-201ENST00000295971 PSME1Q06323 249 aa16.33■□□□□ 0.2
RBM47-201ENST00000295971 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
RBM47-201ENST00000295971 ZRANB1Q9UGI0 708 aa16.33■□□□□ 0.2
RBM47-201ENST00000295971 A0A1W2PP64 1363 aa16.33■□□□□ 0.2
RBM47-201ENST00000295971 SAMD9LQ8IVG5 1584 aa16.33■□□□□ 0.2
RBM47-201ENST00000295971 SMC5Q8IY18 1101 aa16.33■□□□□ 0.2
RBM47-201ENST00000295971 POLKQ9UBT6 870 aa16.33■□□□□ 0.2
RBM47-201ENST00000295971 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
RBM47-201ENST00000295971 MPNDQ8N594 471 aa16.32■□□□□ 0.2
RBM47-201ENST00000295971 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
RBM47-201ENST00000295971 UPF3BQ9BZI7 483 aaKnown RBP16.32■□□□□ 0.2
RBM47-201ENST00000295971 CWC22Q9HCG8 908 aaKnown RBP16.32■□□□□ 0.2
RBM47-201ENST00000295971 R3HCC1Q9Y3T6 440 aaKnown RBP16.32■□□□□ 0.2
RBM47-201ENST00000295971 GOLGA6L6A8MZA4 724 aa16.31■□□□□ 0.2
RBM47-201ENST00000295971 TRMT2AQ8IZ69 625 aaKnown RBP16.31■□□□□ 0.2
RBM47-201ENST00000295971 XRCC6P12956 609 aaKnown RBP eCLIP16.31■□□□□ 0.2
RBM47-201ENST00000295971 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
RBM47-201ENST00000295971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.31■□□□□ 0.2
RBM47-201ENST00000295971 PTPRTO14522 1441 aa16.31■□□□□ 0.2
RBM47-201ENST00000295971 CCDC173Q0VFZ6 552 aa16.31■□□□□ 0.2
RBM47-201ENST00000295971 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
RBM47-201ENST00000295971 CLASRPQ8N2M8 674 aaKnown RBP16.3■□□□□ 0.2
RBM47-201ENST00000295971 KDM5DQ9BY66 1539 aa16.3■□□□□ 0.2
RBM47-201ENST00000295971 MBD3O95983 291 aa16.3■□□□□ 0.2
RBM47-201ENST00000295971 G3BP1Q13283 466 aaKnown RBP eCLIP16.3■□□□□ 0.2
RBM47-201ENST00000295971 MCM2P49736 904 aa16.3■□□□□ 0.2
RBM47-201ENST00000295971 NEXNQ0ZGT2 675 aa16.3■□□□□ 0.2
RBM47-201ENST00000295971 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
RBM47-201ENST00000295971 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.3■□□□□ 0.2
RBM47-201ENST00000295971 NRDCO43847 1150 aa16.29■□□□□ 0.2
RBM47-201ENST00000295971 VAMP4O75379 141 aa16.29■□□□□ 0.2
RBM47-201ENST00000295971 TRIM35Q9UPQ4 493 aa16.29■□□□□ 0.2
RBM47-201ENST00000295971 TSHZ3Q63HK5 1081 aa16.29■□□□□ 0.2
RBM47-201ENST00000295971 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.29■□□□□ 0.2
RBM47-201ENST00000295971 H3BQV1 296 aa16.29■□□□□ 0.2
RBM47-201ENST00000295971 FIBPO43427 364 aa16.29■□□□□ 0.2
RBM47-201ENST00000295971 IFFO2Q5TF58 517 aa16.29■□□□□ 0.2
RBM47-201ENST00000295971 CNTROBQ8N137 903 aa16.28■□□□□ 0.2
RBM47-201ENST00000295971 KRT24Q2M2I5 525 aa16.28■□□□□ 0.2
RBM47-201ENST00000295971 C16orf71Q8IYS4 520 aaPredicted RBP16.28■□□□□ 0.2
RBM47-201ENST00000295971 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
RBM47-201ENST00000295971 ATP10AO60312 1499 aa16.28■□□□□ 0.2
RBM47-201ENST00000295971 AEBP1Q8IUX7 1158 aa16.28■□□□□ 0.2
RBM47-201ENST00000295971 ZNF518AQ6AHZ1 1483 aa16.27■□□□□ 0.2
RBM47-201ENST00000295971 FAM184AQ8NB25 1140 aa16.27■□□□□ 0.2
RBM47-201ENST00000295971 SRGAP3O43295 1099 aa16.27■□□□□ 0.2
RBM47-201ENST00000295971 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.2
RBM47-201ENST00000295971 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.19
RBM47-201ENST00000295971 MEIS3Q99687 375 aa16.27■□□□□ 0.19
RBM47-201ENST00000295971 SRCIN1Q9C0H9 1055 aa16.27■□□□□ 0.19
RBM47-201ENST00000295971 PUS7Q96PZ0 661 aaKnown RBP16.26■□□□□ 0.19
RBM47-201ENST00000295971 DDX58O95786 925 aaKnown RBP16.26■□□□□ 0.19
RBM47-201ENST00000295971 NUTM1Q86Y26 1132 aa16.26■□□□□ 0.19
RBM47-201ENST00000295971 HSP90AB2PQ58FF8 381 aa16.25■□□□□ 0.19
RBM47-201ENST00000295971 BAG4O95429 457 aaKnown RBP16.25■□□□□ 0.19
RBM47-201ENST00000295971 TAF7LQ5H9L4 462 aa16.25■□□□□ 0.19
RBM47-201ENST00000295971 NCKAP5LQ9HCH0 1330 aa16.25■□□□□ 0.19
RBM47-201ENST00000295971 SYCE3A1L190 88 aa16.24■□□□□ 0.19
RBM47-201ENST00000295971 MX1P20591 662 aa16.24■□□□□ 0.19
RBM47-201ENST00000295971 TTC22Q5TAA0 569 aa16.24■□□□□ 0.19
RBM47-201ENST00000295971 ATP7AQ04656 1500 aa16.24■□□□□ 0.19
RBM47-201ENST00000295971 RIC3Q7Z5B4 369 aa16.24■□□□□ 0.19
RBM47-201ENST00000295971 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
RBM47-201ENST00000295971 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.24■□□□□ 0.19
RBM47-201ENST00000295971 CDC42BPAQ5VT25 1732 aa16.24■□□□□ 0.19
RBM47-201ENST00000295971 RNF20Q5VTR2 975 aa16.24■□□□□ 0.19
RBM47-201ENST00000295971 SDSP20132 328 aa16.23■□□□□ 0.19
RBM47-201ENST00000295971 FOSBP53539 338 aa16.23■□□□□ 0.19
RBM47-201ENST00000295971 PRDM15P57071 1507 aaPredicted RBP16.23■□□□□ 0.19
RBM47-201ENST00000295971 TSPY26PQ9H489 355 aa16.23■□□□□ 0.19
RBM47-201ENST00000295971 ERVK-7P63135 1459 aa16.23■□□□□ 0.19
RBM47-201ENST00000295971 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
RBM47-201ENST00000295971 CWC27Q6UX04 472 aaKnown RBP16.23■□□□□ 0.19
RBM47-201ENST00000295971 TTC37Q6PGP7 1564 aa16.23■□□□□ 0.19
RBM47-201ENST00000295971 ZBTB7BO15156 539 aaPredicted RBP16.22■□□□□ 0.19
RBM47-201ENST00000295971 TTC5Q8N0Z6 440 aa16.22■□□□□ 0.19
RBM47-201ENST00000295971 FSD1Q9BTV5 496 aa16.22■□□□□ 0.19
RBM47-201ENST00000295971 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
RBM47-201ENST00000295971 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms