RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 TOPAZ1Q8N9V7 1692 aa24.49■■□□□ 1.51
SHF-201ENST00000290894 DCTN1Q14203 1278 aa24.48■■□□□ 1.51
SHF-201ENST00000290894 ELL2O00472 640 aaPredicted RBP24.48■■□□□ 1.51
SHF-201ENST00000290894 TRIM27P14373 513 aa24.48■■□□□ 1.51
SHF-201ENST00000290894 EIF4A2Q14240 407 aaKnown RBP24.48■■□□□ 1.51
SHF-201ENST00000290894 IPO9Q96P70 1041 aaKnown RBP24.47■■□□□ 1.51
SHF-201ENST00000290894 DZIP1LQ8IYY4 767 aaKnown RBP24.46■■□□□ 1.51
SHF-201ENST00000290894 NOB1Q9ULX3 412 aaKnown RBP24.46■■□□□ 1.51
SHF-201ENST00000290894 NRKQ7Z2Y5 1582 aa24.46■■□□□ 1.51
SHF-201ENST00000290894 NUTM2GQ5VZR2 741 aa24.46■■□□□ 1.51
SHF-201ENST00000290894 SULT6B1Q6IMI4 303 aa24.46■■□□□ 1.51
SHF-201ENST00000290894 NOP58Q9Y2X3 529 aaKnown RBP24.46■■□□□ 1.51
SHF-201ENST00000290894 RIMS1Q86UR5 1692 aaKnown RBP24.46■■□□□ 1.51
SHF-201ENST00000290894 OVOS2A0A0J9YW53 1432 aa24.45■■□□□ 1.5
SHF-201ENST00000290894 OVOS2Q6IE36 1432 aa24.45■■□□□ 1.5
SHF-201ENST00000290894 CT47B1P0C2W7 299 aaPredicted RBP24.44■■□□□ 1.5
SHF-201ENST00000290894 MVPQ14764 893 aaKnown RBP24.44■■□□□ 1.5
SHF-201ENST00000290894 DIP2AQ14689 1571 aa24.44■■□□□ 1.5
SHF-201ENST00000290894 PTCH1Q13635 1447 aa24.44■■□□□ 1.5
SHF-201ENST00000290894 CEP170BQ9Y4F5 1589 aaPredicted RBP24.43■■□□□ 1.5
SHF-201ENST00000290894 TSPYL6Q8N831 410 aa24.43■■□□□ 1.5
SHF-201ENST00000290894 ITPRIPQ8IWB1 547 aa24.42■■□□□ 1.5
SHF-201ENST00000290894 DLG5Q8TDM6 1919 aa24.41■■□□□ 1.5
SHF-201ENST00000290894 ATF7IPQ6VMQ6 1270 aa24.41■■□□□ 1.5
SHF-201ENST00000290894 MBIPQ9NS73 344 aa24.4■■□□□ 1.5
SHF-201ENST00000290894 C8orf34Q49A92 452 aa24.39■■□□□ 1.5
SHF-201ENST00000290894 MAP3K19Q56UN5 1328 aa24.39■■□□□ 1.49
SHF-201ENST00000290894 PEAK1Q9H792 1746 aa24.39■■□□□ 1.49
SHF-201ENST00000290894 SSH2Q76I76 1423 aa24.38■■□□□ 1.49
SHF-201ENST00000290894 ZBTB47Q9UFB7 747 aaPredicted RBP24.38■■□□□ 1.49
SHF-201ENST00000290894 FAM161AQ3B820 660 aa24.37■■□□□ 1.49
SHF-201ENST00000290894 TMEM57Q8N5G2 664 aa24.37■■□□□ 1.49
SHF-201ENST00000290894 XRN1Q8IZH2 1706 aaKnown RBP24.37■■□□□ 1.49
SHF-201ENST00000290894 ANKLE2Q86XL3 938 aa24.36■■□□□ 1.49
SHF-201ENST00000290894 NLRP6P59044 892 aa24.36■■□□□ 1.49
SHF-201ENST00000290894 GNAI1P63096 354 aa24.36■■□□□ 1.49
SHF-201ENST00000290894 C14orf37Q86TY3 774 aa24.35■■□□□ 1.49
SHF-201ENST00000290894 IFT57Q9NWB7 429 aa24.35■■□□□ 1.49
SHF-201ENST00000290894 VAMP4O75379 141 aa24.34■■□□□ 1.49
SHF-201ENST00000290894 MCM10Q7L590 875 aa24.34■■□□□ 1.49
SHF-201ENST00000290894 C8orf58Q8NAV2 365 aa24.34■■□□□ 1.49
SHF-201ENST00000290894 USP31Q70CQ4 1352 aa24.34■■□□□ 1.49
SHF-201ENST00000290894 TTC21AQ8NDW8 1320 aa24.33■■□□□ 1.49
SHF-201ENST00000290894 CALD1Q05682 793 aaKnown RBP24.33■■□□□ 1.49
SHF-201ENST00000290894 KIF16BQ96L93 1317 aa24.33■■□□□ 1.49
SHF-201ENST00000290894 ZNF853P0CG23 659 aa24.32■■□□□ 1.48
SHF-201ENST00000290894 AMPHP49418 695 aa24.32■■□□□ 1.48
SHF-201ENST00000290894 NALCNQ8IZF0 1738 aa24.32■■□□□ 1.48
SHF-201ENST00000290894 CFAP44Q96MT7 982 aa24.32■■□□□ 1.48
SHF-201ENST00000290894 LMOD3Q0VAK6 560 aa24.31■■□□□ 1.48
SHF-201ENST00000290894 KRT24Q2M2I5 525 aa24.31■■□□□ 1.48
SHF-201ENST00000290894 ALDH1L2Q3SY69 923 aa24.31■■□□□ 1.48
SHF-201ENST00000290894 RWDD1Q9H446 243 aaPredicted RBP24.31■■□□□ 1.48
SHF-201ENST00000290894 PDZRN3Q9UPQ7 1066 aa24.31■■□□□ 1.48
SHF-201ENST00000290894 FOXO3O43524 673 aa24.3■■□□□ 1.48
SHF-201ENST00000290894 TWISTNBQ3B726 338 aaPredicted RBP24.3■■□□□ 1.48
SHF-201ENST00000290894 DDX19BQ9UMR2 479 aa24.3■■□□□ 1.48
SHF-201ENST00000290894 IPO8O15397 1037 aaKnown RBP24.3■■□□□ 1.48
SHF-201ENST00000290894 PLEKHG5O94827 1062 aa24.3■■□□□ 1.48
SHF-201ENST00000290894 ABTB2Q8N961 1025 aa24.3■■□□□ 1.48
SHF-201ENST00000290894 AAMPQ13685 434 aa24.29■■□□□ 1.48
SHF-201ENST00000290894 PIK3C2AO00443 1686 aa24.29■■□□□ 1.48
SHF-201ENST00000290894 MRPL50Q8N5N7 158 aaKnown RBP24.27■■□□□ 1.48
SHF-201ENST00000290894 LTV1Q96GA3 475 aaPredicted RBP24.27■■□□□ 1.48
SHF-201ENST00000290894 NBR1Q14596 966 aa24.26■■□□□ 1.47
SHF-201ENST00000290894 MIS18AQ9NYP9 233 aa24.26■■□□□ 1.47
SHF-201ENST00000290894 FLT4P35916 1363 aa24.26■■□□□ 1.47
SHF-201ENST00000290894 EYA1Q99502 592 aa24.25■■□□□ 1.47
SHF-201ENST00000290894 PIK3R4Q99570 1358 aa24.25■■□□□ 1.47
SHF-201ENST00000290894 SBNO1A3KN83 1393 aa24.24■■□□□ 1.47
SHF-201ENST00000290894 ZBTB40Q9NUA8 1239 aa24.24■■□□□ 1.47
SHF-201ENST00000290894 FMN2Q9NZ56 1722 aa24.24■■□□□ 1.47
SHF-201ENST00000290894 MTHFSDQ2M296 383 aaKnown RBP24.23■■□□□ 1.47
SHF-201ENST00000290894 C1orf115Q9H7X2 142 aa24.23■■□□□ 1.47
SHF-201ENST00000290894 PHF8Q9UPP1 1060 aa24.23■■□□□ 1.47
SHF-201ENST00000290894 ANKARQ7Z5J8 1434 aa24.23■■□□□ 1.47
SHF-201ENST00000290894 SLC4A3P48751 1232 aa24.23■■□□□ 1.47
SHF-201ENST00000290894 ESCO1Q5FWF5 840 aa24.23■■□□□ 1.47
SHF-201ENST00000290894 CHD2O14647 1828 aaKnown RBP24.22■■□□□ 1.47
SHF-201ENST00000290894 SEC24BO95487 1268 aa24.22■■□□□ 1.47
SHF-201ENST00000290894 RGPD1P0DJD0 1748 aa24.21■■□□□ 1.47
SHF-201ENST00000290894 ZNF428Q96B54 188 aa24.21■■□□□ 1.47
SHF-201ENST00000290894 ZBTB7CA1YPR0 619 aa24.21■■□□□ 1.47
SHF-201ENST00000290894 XPCQ01831 940 aaPredicted RBP24.2■■□□□ 1.46
SHF-201ENST00000290894 SETD1BQ9UPS6 1966 aaKnown RBP24.2■■□□□ 1.46
SHF-201ENST00000290894 ADAMTSL3P82987 1691 aa24.19■■□□□ 1.46
SHF-201ENST00000290894 HOXC9P31274 260 aa24.19■■□□□ 1.46
SHF-201ENST00000290894 ARHGEF10O15013 1369 aa24.18■■□□□ 1.46
SHF-201ENST00000290894 BRPF1P55201 1214 aaPredicted RBP24.18■■□□□ 1.46
SHF-201ENST00000290894 USHBP1Q8N6Y0 703 aa24.18■■□□□ 1.46
SHF-201ENST00000290894 CHL1O00533 1208 aa24.17■■□□□ 1.46
SHF-201ENST00000290894 HDAC1Q13547 482 aaPredicted RBP24.16■■□□□ 1.46
SHF-201ENST00000290894 ZNF142P52746 1687 aaPredicted RBP24.16■■□□□ 1.46
SHF-201ENST00000290894 PSME1Q06323 249 aa24.16■■□□□ 1.46
SHF-201ENST00000290894 IGSF1Q8N6C5 1336 aa24.15■■□□□ 1.46
SHF-201ENST00000290894 ZBTB7BO15156 539 aaPredicted RBP24.15■■□□□ 1.46
SHF-201ENST00000290894 RTF1Q92541 710 aaKnown RBP24.15■■□□□ 1.46
SHF-201ENST00000290894 MARF1Q9Y4F3 1742 aaKnown RBP24.15■■□□□ 1.46
SHF-201ENST00000290894 ORAI2Q96SN7 254 aa24.15■■□□□ 1.46
SHF-201ENST00000290894 NPHP4O75161 1426 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms