RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 DNAJC2Q99543 621 aaKnown RBP14.47□□□□□ -0.09
ERBB2-201ENST00000269571 GTF2E1P29083 439 aaPredicted RBP14.46□□□□□ -0.09
ERBB2-201ENST00000269571 CCDC73Q6ZRK6 1079 aa14.46□□□□□ -0.09
ERBB2-201ENST00000269571 ZNF830Q96NB3 372 aaPredicted RBP14.46□□□□□ -0.09
ERBB2-201ENST00000269571 TPM3P06753 285 aa14.46□□□□□ -0.1
ERBB2-201ENST00000269571 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.46□□□□□ -0.1
ERBB2-201ENST00000269571 TMPOP42166 694 aaKnown RBP14.45□□□□□ -0.1
ERBB2-201ENST00000269571 LARP6Q9BRS8 491 aaKnown RBP14.45□□□□□ -0.1
ERBB2-201ENST00000269571 NINLQ9Y2I6 1382 aa14.45□□□□□ -0.1
ERBB2-201ENST00000269571 CCDC112Q8NEF3 446 aa14.45□□□□□ -0.1
ERBB2-201ENST00000269571 TIGD1Q96MW7 591 aa14.45□□□□□ -0.1
ERBB2-201ENST00000269571 CDK19Q9BWU1 502 aa14.45□□□□□ -0.1
ERBB2-201ENST00000269571 SLC4A2P04920 1241 aa14.45□□□□□ -0.1
ERBB2-201ENST00000269571 KDM4AO75164 1064 aa14.45□□□□□ -0.1
ERBB2-201ENST00000269571 SKIDA1Q1XH10 827 aa14.45□□□□□ -0.1
ERBB2-201ENST00000269571 DDX54Q8TDD1 881 aaKnown RBP14.45□□□□□ -0.1
ERBB2-201ENST00000269571 RPRD2Q5VT52 1461 aaKnown RBP14.45□□□□□ -0.1
ERBB2-201ENST00000269571 PATL2C9JE40 543 aaKnown RBP14.44□□□□□ -0.1
ERBB2-201ENST00000269571 FERMT3Q86UX7 667 aa14.44□□□□□ -0.1
ERBB2-201ENST00000269571 ADGRF5Q8IZF2 1346 aa14.44□□□□□ -0.1
ERBB2-201ENST00000269571 MCM2P49736 904 aa14.44□□□□□ -0.1
ERBB2-201ENST00000269571 FILIP1Q7Z7B0 1213 aa14.44□□□□□ -0.1
ERBB2-201ENST00000269571 IL1RAPL2Q9NP60 686 aa14.44□□□□□ -0.1
ERBB2-201ENST00000269571 ARGLU1Q9NWB6 273 aaPredicted RBP14.44□□□□□ -0.1
ERBB2-201ENST00000269571 EXOC6BQ9Y2D4 811 aa14.44□□□□□ -0.1
ERBB2-201ENST00000269571 AIMP1Q12904 312 aaKnown RBP14.44□□□□□ -0.1
ERBB2-201ENST00000269571 STK3Q13188 491 aa14.44□□□□□ -0.1
ERBB2-201ENST00000269571 WDR33Q9C0J8 1336 aaKnown RBP14.44□□□□□ -0.1
ERBB2-201ENST00000269571 UBTFL1P0CB47 393 aaPredicted RBP14.44□□□□□ -0.1
ERBB2-201ENST00000269571 RLBP1P12271 317 aa14.44□□□□□ -0.1
ERBB2-201ENST00000269571 IDI1Q13907 227 aa14.44□□□□□ -0.1
ERBB2-201ENST00000269571 TBC1D9Q6ZT07 1266 aa14.44□□□□□ -0.1
ERBB2-201ENST00000269571 NOC3LQ8WTT2 800 aaKnown RBP14.44□□□□□ -0.1
ERBB2-201ENST00000269571 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
ERBB2-201ENST00000269571 TTC5Q8N0Z6 440 aa14.43□□□□□ -0.1
ERBB2-201ENST00000269571 DISP3Q9P2K9 1392 aa14.43□□□□□ -0.1
ERBB2-201ENST00000269571 CCDC34Q96HJ3 373 aa14.43□□□□□ -0.1
ERBB2-201ENST00000269571 FANCAO15360 1455 aa14.42□□□□□ -0.1
ERBB2-201ENST00000269571 CCDC192P0DO97 292 aa14.42□□□□□ -0.1
ERBB2-201ENST00000269571 CAMK4Q16566 473 aa14.42□□□□□ -0.1
ERBB2-201ENST00000269571 IGSF3O75054 1194 aa14.42□□□□□ -0.1
ERBB2-201ENST00000269571 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
ERBB2-201ENST00000269571 DEF6Q9H4E7 631 aa14.42□□□□□ -0.1
ERBB2-201ENST00000269571 RNF20Q5VTR2 975 aa14.42□□□□□ -0.1
ERBB2-201ENST00000269571 SMC2O95347 1197 aa14.41□□□□□ -0.1
ERBB2-201ENST00000269571 G3BP1Q13283 466 aaKnown RBP eCLIP14.41□□□□□ -0.1
ERBB2-201ENST00000269571 FAM177A1Q8N128 213 aaPredicted RBP14.41□□□□□ -0.1
ERBB2-201ENST00000269571 WAPLQ7Z5K2 1190 aa14.41□□□□□ -0.1
ERBB2-201ENST00000269571 CPLX1O14810 134 aa14.41□□□□□ -0.1
ERBB2-201ENST00000269571 DCTN1Q14203 1278 aa14.41□□□□□ -0.1
ERBB2-201ENST00000269571 PDILTQ8N807 584 aa14.41□□□□□ -0.1
ERBB2-201ENST00000269571 MCM5P33992 734 aa14.4□□□□□ -0.1
ERBB2-201ENST00000269571 KLHL40Q2TBA0 621 aa14.4□□□□□ -0.1
ERBB2-201ENST00000269571 TTLL5Q6EMB2 1281 aa14.4□□□□□ -0.1
ERBB2-201ENST00000269571 ZSCAN23Q3MJ62 389 aa14.4□□□□□ -0.1
ERBB2-201ENST00000269571 THEMISQ8N1K5 641 aaPredicted RBP14.4□□□□□ -0.1
ERBB2-201ENST00000269571 TNMDQ9H2S6 317 aa14.4□□□□□ -0.1
ERBB2-201ENST00000269571 RAPGEF6Q8TEU7 1601 aa14.4□□□□□ -0.1
ERBB2-201ENST00000269571 UGGT2Q9NYU1 1516 aa14.4□□□□□ -0.1
ERBB2-201ENST00000269571 PLEKHH1Q9ULM0 1364 aa14.4□□□□□ -0.1
ERBB2-201ENST00000269571 FAM177BA6PVY3 158 aa14.4□□□□□ -0.1
ERBB2-201ENST00000269571 CEBPAP49715 358 aaPredicted RBP14.4□□□□□ -0.1
ERBB2-201ENST00000269571 ABTB2Q8N961 1025 aa14.39□□□□□ -0.11
ERBB2-201ENST00000269571 CT47B1P0C2W7 299 aaPredicted RBP14.39□□□□□ -0.11
ERBB2-201ENST00000269571 LARP1BQ659C4 914 aaKnown RBP14.39□□□□□ -0.11
ERBB2-201ENST00000269571 ESCO1Q5FWF5 840 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 ADAMTS12P58397 1594 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 GNAI2P04899 355 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 DHX29Q7Z478 1369 aaKnown RBP14.38□□□□□ -0.11
ERBB2-201ENST00000269571 TSHZ3Q63HK5 1081 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 SULT6B1Q6IMI4 303 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 CNTROBQ8N137 903 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 RNF123Q5XPI4 1314 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 RPGRIP1LQ68CZ1 1315 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 NSD3Q9BZ95 1437 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 KINO60870 393 aaKnown RBP14.38□□□□□ -0.11
ERBB2-201ENST00000269571 DDX58O95786 925 aaKnown RBP14.38□□□□□ -0.11
ERBB2-201ENST00000269571 ATF3P18847 181 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 PRIM1P49642 420 aaKnown RBP14.38□□□□□ -0.11
ERBB2-201ENST00000269571 CLASRPQ8N2M8 674 aaKnown RBP14.38□□□□□ -0.11
ERBB2-201ENST00000269571 GAS2L2Q8NHY3 880 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 MIS18AQ9NYP9 233 aa14.38□□□□□ -0.11
ERBB2-201ENST00000269571 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
ERBB2-201ENST00000269571 C16orf45Q96MC5 204 aaPredicted RBP14.37□□□□□ -0.11
ERBB2-201ENST00000269571 LRRCC1Q9C099 1032 aa14.37□□□□□ -0.11
ERBB2-201ENST00000269571 GNAI3P08754 354 aa14.37□□□□□ -0.11
ERBB2-201ENST00000269571 CWC27Q6UX04 472 aaKnown RBP14.37□□□□□ -0.11
ERBB2-201ENST00000269571 IPO4Q8TEX9 1081 aaKnown RBP14.37□□□□□ -0.11
ERBB2-201ENST00000269571 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
ERBB2-201ENST00000269571 FSD1Q9BTV5 496 aa14.37□□□□□ -0.11
ERBB2-201ENST00000269571 EVA1CP58658 441 aa14.36□□□□□ -0.11
ERBB2-201ENST00000269571 NEUROD6Q96NK8 337 aa14.36□□□□□ -0.11
ERBB2-201ENST00000269571 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
ERBB2-201ENST00000269571 PROSER2Q86WR7 435 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-201ENST00000269571 GPATCH11Q8N954 259 aa14.36□□□□□ -0.11
ERBB2-201ENST00000269571 HCLS1P14317 486 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-201ENST00000269571 KRT85P78386 507 aa14.36□□□□□ -0.11
ERBB2-201ENST00000269571 TTC12Q9H892 705 aaPredicted RBP14.36□□□□□ -0.11
ERBB2-201ENST00000269571 GPRASP1Q5JY77 1395 aa14.36□□□□□ -0.11
ERBB2-201ENST00000269571 ADCY5O95622 1261 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms