RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 ESF1Q9H501 851 aaKnown RBP12.09□□□□□ -0.47
SIX1-201ENST00000247182 MBD3O95983 291 aa12.09□□□□□ -0.47
SIX1-201ENST00000247182 MCCP23508 829 aa12.09□□□□□ -0.47
SIX1-201ENST00000247182 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
SIX1-201ENST00000247182 IDI1Q13907 227 aa12.09□□□□□ -0.47
SIX1-201ENST00000247182 STAC3Q96MF2 364 aa12.09□□□□□ -0.47
SIX1-201ENST00000247182 TIGD1Q96MW7 591 aa12.08□□□□□ -0.48
SIX1-201ENST00000247182 MIS18AQ9NYP9 233 aa12.08□□□□□ -0.48
SIX1-201ENST00000247182 EMILIN1Q9Y6C2 1016 aa12.08□□□□□ -0.48
SIX1-201ENST00000247182 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.08□□□□□ -0.48
SIX1-201ENST00000247182 CCDC112Q8NEF3 446 aa12.08□□□□□ -0.48
SIX1-201ENST00000247182 C16orf45Q96MC5 204 aaPredicted RBP12.08□□□□□ -0.48
SIX1-201ENST00000247182 SKIDA1Q1XH10 827 aa12.08□□□□□ -0.48
SIX1-201ENST00000247182 CCDC27Q2M243 656 aa12.08□□□□□ -0.48
SIX1-201ENST00000247182 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
SIX1-201ENST00000247182 GAS2L2Q8NHY3 880 aa12.08□□□□□ -0.48
SIX1-201ENST00000247182 PLCH2O75038 1416 aa12.07□□□□□ -0.48
SIX1-201ENST00000247182 HTATSF1O43719 755 aaKnown RBP12.07□□□□□ -0.48
SIX1-201ENST00000247182 NEK4P51957 841 aa12.07□□□□□ -0.48
SIX1-201ENST00000247182 RAB3GAP1Q15042 981 aa12.07□□□□□ -0.48
SIX1-201ENST00000247182 ATAD2Q6PL18 1390 aa12.07□□□□□ -0.48
SIX1-201ENST00000247182 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
SIX1-201ENST00000247182 MCM5P33992 734 aa12.07□□□□□ -0.48
SIX1-201ENST00000247182 CCAR2Q8N163 923 aaKnown RBP12.07□□□□□ -0.48
SIX1-201ENST00000247182 CDK19Q9BWU1 502 aa12.07□□□□□ -0.48
SIX1-201ENST00000247182 GTF2F1P35269 517 aaKnown RBP eCLIP12.07□□□□□ -0.48
SIX1-201ENST00000247182 KRT24Q2M2I5 525 aa12.07□□□□□ -0.48
SIX1-201ENST00000247182 PRIMPOLQ96LW4 560 aa12.07□□□□□ -0.48
SIX1-201ENST00000247182 ERCC6L2Q5T890 1561 aa12.06□□□□□ -0.48
SIX1-201ENST00000247182 SMARCA5O60264 1052 aaPredicted RBP12.06□□□□□ -0.48
SIX1-201ENST00000247182 TERF1P54274 439 aa12.06□□□□□ -0.48
SIX1-201ENST00000247182 RTF1Q92541 710 aaKnown RBP12.06□□□□□ -0.48
SIX1-201ENST00000247182 PIK3C2GO75747 1445 aa12.06□□□□□ -0.48
SIX1-201ENST00000247182 ABCA8O94911 1581 aa12.06□□□□□ -0.48
SIX1-201ENST00000247182 TTC37Q6PGP7 1564 aa12.06□□□□□ -0.48
SIX1-201ENST00000247182 GTF2E1P29083 439 aaPredicted RBP12.06□□□□□ -0.48
SIX1-201ENST00000247182 CHD1LQ86WJ1 897 aa12.06□□□□□ -0.48
SIX1-201ENST00000247182 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.06□□□□□ -0.48
SIX1-201ENST00000247182 V9GYY5 206 aaPredicted RBP12.06□□□□□ -0.48
SIX1-201ENST00000247182 FIBPO43427 364 aa12.06□□□□□ -0.48
SIX1-201ENST00000247182 GNL2Q13823 731 aaKnown RBP12.06□□□□□ -0.48
SIX1-201ENST00000247182 PHACTR3Q96KR7 559 aa12.06□□□□□ -0.48
SIX1-201ENST00000247182 C14orf93Q9H972 538 aaKnown RBP12.06□□□□□ -0.48
SIX1-201ENST00000247182 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.06□□□□□ -0.48
SIX1-201ENST00000247182 TEX35Q5T0J7 233 aa12.05□□□□□ -0.48
SIX1-201ENST00000247182 GORABQ5T7V8 394 aa12.05□□□□□ -0.48
SIX1-201ENST00000247182 PPP1R9BQ96SB3 815 aa12.05□□□□□ -0.48
SIX1-201ENST00000247182 FYB1O15117 783 aa12.05□□□□□ -0.48
SIX1-201ENST00000247182 C16orf71Q8IYS4 520 aaPredicted RBP12.05□□□□□ -0.48
SIX1-201ENST00000247182 IPO4Q8TEX9 1081 aaKnown RBP12.05□□□□□ -0.48
SIX1-201ENST00000247182 ADCY5O95622 1261 aa12.05□□□□□ -0.48
SIX1-201ENST00000247182 LTV1Q96GA3 475 aaPredicted RBP12.05□□□□□ -0.48
SIX1-201ENST00000247182 CHAMP1Q96JM3 812 aa12.05□□□□□ -0.48
SIX1-201ENST00000247182 DUOX2Q9NRD8 1548 aa12.05□□□□□ -0.48
SIX1-201ENST00000247182 TRPM1Q7Z4N2 1603 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 NRDCO43847 1150 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 MYRIPQ8NFW9 859 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 FBXW7Q969H0 707 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 ZBTB9Q96C00 473 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 TRIM5Q9C035 493 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 CDC45O75419 566 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 TXNDC2Q86VQ3 553 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 NGEFQ8N5V2 710 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 HS1BP3Q53T59 392 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 TMX1Q9H3N1 280 aa12.04□□□□□ -0.48
SIX1-201ENST00000247182 RABEP1Q15276 862 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 TSHZ3Q63HK5 1081 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 NME9Q86XW9 330 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 TRIM35Q9UPQ4 493 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 POLR3GO15318 223 aaPredicted RBP12.03□□□□□ -0.48
SIX1-201ENST00000247182 UTP14CQ5TAP6 766 aaKnown RBP12.03□□□□□ -0.48
SIX1-201ENST00000247182 GPATCH11Q8N954 259 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 RILPL2Q969X0 211 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 DNAJC2Q99543 621 aaKnown RBP12.03□□□□□ -0.48
SIX1-201ENST00000247182 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 ATP10AO60312 1499 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 DTNBO60941 627 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 HCLS1P14317 486 aaPredicted RBP12.03□□□□□ -0.48
SIX1-201ENST00000247182 TWISTNBQ3B726 338 aaPredicted RBP12.03□□□□□ -0.48
SIX1-201ENST00000247182 LRSAM1Q6UWE0 723 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 BCL2L12Q9HB09 334 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 NUTM2GQ5VZR2 741 aa12.03□□□□□ -0.48
SIX1-201ENST00000247182 FANCAO15360 1455 aa12.02□□□□□ -0.48
SIX1-201ENST00000247182 ADGRL1O94910 1474 aa12.02□□□□□ -0.48
SIX1-201ENST00000247182 PRDM15P57071 1507 aaPredicted RBP12.02□□□□□ -0.48
SIX1-201ENST00000247182 INSRP06213 1382 aa12.02□□□□□ -0.48
SIX1-201ENST00000247182 ZNF500O60304 480 aaPredicted RBP12.02□□□□□ -0.48
SIX1-201ENST00000247182 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
SIX1-201ENST00000247182 CYB5RLQ6IPT4 315 aa12.02□□□□□ -0.49
SIX1-201ENST00000247182 GOLGA6L1Q8N7Z2 621 aa12.02□□□□□ -0.49
SIX1-201ENST00000247182 ANO2Q9NQ90 1003 aa12.02□□□□□ -0.49
SIX1-201ENST00000247182 ADCY10Q96PN6 1610 aa12.01□□□□□ -0.49
SIX1-201ENST00000247182 ERVK-7P63135 1459 aa12.01□□□□□ -0.49
SIX1-201ENST00000247182 ATP2B3Q16720 1220 aa12.01□□□□□ -0.49
SIX1-201ENST00000247182 HOMER1Q86YM7 354 aa12.01□□□□□ -0.49
SIX1-201ENST00000247182 SMC5Q8IY18 1101 aa12.01□□□□□ -0.49
SIX1-201ENST00000247182 GPS2Q13227 327 aa12.01□□□□□ -0.49
SIX1-201ENST00000247182 MCM10Q7L590 875 aa12.01□□□□□ -0.49
SIX1-201ENST00000247182 TOMM22Q9NS69 142 aa12.01□□□□□ -0.49
SIX1-201ENST00000247182 VPS37CA5D8V6 355 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms