RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 RSPH6AQ9H0K4 717 aa22.03■■□□□ 1.12
CHGA-201ENST00000216492 TCERG1O14776 1098 aaKnown RBP22.03■■□□□ 1.12
CHGA-201ENST00000216492 PRKAR2BP31323 418 aa22.03■■□□□ 1.12
CHGA-201ENST00000216492 DUSP27Q5VZP5 1158 aa22.03■■□□□ 1.12
CHGA-201ENST00000216492 PHF23Q9BUL5 403 aaPredicted RBP22.03■■□□□ 1.12
CHGA-201ENST00000216492 NEFMP07197 916 aa22.02■■□□□ 1.12
CHGA-201ENST00000216492 LMOD2Q6P5Q4 547 aa22.02■■□□□ 1.12
CHGA-201ENST00000216492 BCL11AQ9H165 835 aa22.02■■□□□ 1.12
CHGA-201ENST00000216492 TMPOP42166 694 aaKnown RBP22.02■■□□□ 1.11
CHGA-201ENST00000216492 SBNO1A3KN83 1393 aa22.01■■□□□ 1.11
CHGA-201ENST00000216492 ANP32AP39687 249 aaKnown RBP22.01■■□□□ 1.11
CHGA-201ENST00000216492 SPINK5Q9NQ38 1064 aaPredicted RBP22.01■■□□□ 1.11
CHGA-201ENST00000216492 IQSEC2Q5JU85 1478 aa22.01■■□□□ 1.11
CHGA-201ENST00000216492 E9PSI1 815 aa22■■□□□ 1.11
CHGA-201ENST00000216492 TRMT2AQ8IZ69 625 aaKnown RBP22■■□□□ 1.11
CHGA-201ENST00000216492 FLT4P35916 1363 aa22■■□□□ 1.11
CHGA-201ENST00000216492 KCNH5Q8NCM2 988 aa22■■□□□ 1.11
CHGA-201ENST00000216492 PLIN1O60240 522 aa21.99■■□□□ 1.11
CHGA-201ENST00000216492 WDR63Q8IWG1 891 aa21.99■■□□□ 1.11
CHGA-201ENST00000216492 DDX17Q92841 729 aaKnown RBP21.99■■□□□ 1.11
CHGA-201ENST00000216492 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.98■■□□□ 1.11
CHGA-201ENST00000216492 SLAIN2Q9P270 581 aa21.98■■□□□ 1.11
CHGA-201ENST00000216492 RIPK4P57078 832 aa21.97■■□□□ 1.11
CHGA-201ENST00000216492 PHACTR3Q96KR7 559 aa21.97■■□□□ 1.11
CHGA-201ENST00000216492 CRBNQ96SW2 442 aa21.97■■□□□ 1.11
CHGA-201ENST00000216492 NPHP3Q7Z494 1330 aa21.97■■□□□ 1.11
CHGA-201ENST00000216492 HOXC9P31274 260 aa21.97■■□□□ 1.11
CHGA-201ENST00000216492 SULT6B1Q6IMI4 303 aa21.97■■□□□ 1.11
CHGA-201ENST00000216492 KIF24Q5T7B8 1368 aa21.96■■□□□ 1.11
CHGA-201ENST00000216492 GCP02774 474 aa21.96■■□□□ 1.11
CHGA-201ENST00000216492 MS4A1P11836 297 aa21.96■■□□□ 1.11
CHGA-201ENST00000216492 KIF1AQ12756 1690 aa21.95■■□□□ 1.1
CHGA-201ENST00000216492 PLEKHG5O94827 1062 aa21.95■■□□□ 1.1
CHGA-201ENST00000216492 BRINP3Q76B58 766 aa21.95■■□□□ 1.1
CHGA-201ENST00000216492 TRIM35Q9UPQ4 493 aa21.95■■□□□ 1.1
CHGA-201ENST00000216492 NOP58Q9Y2X3 529 aaKnown RBP21.95■■□□□ 1.1
CHGA-201ENST00000216492 PEAK1Q9H792 1746 aa21.94■■□□□ 1.1
CHGA-201ENST00000216492 AEBP1Q8IUX7 1158 aa21.92■■□□□ 1.1
CHGA-201ENST00000216492 XIRP1Q702N8 1843 aaKnown RBP21.92■■□□□ 1.1
CHGA-201ENST00000216492 NFE2L2Q16236 605 aa21.92■■□□□ 1.1
CHGA-201ENST00000216492 IP6K1Q92551 441 aa21.92■■□□□ 1.1
CHGA-201ENST00000216492 USP54Q70EL1 1684 aa21.92■■□□□ 1.1
CHGA-201ENST00000216492 IPO9Q96P70 1041 aaKnown RBP21.91■■□□□ 1.1
CHGA-201ENST00000216492 EYA1Q99502 592 aa21.91■■□□□ 1.1
CHGA-201ENST00000216492 MARF1Q9Y4F3 1742 aaKnown RBP21.9■■□□□ 1.1
CHGA-201ENST00000216492 USP19O94966 1318 aa21.89■■□□□ 1.1
CHGA-201ENST00000216492 ZBTB7CA1YPR0 619 aa21.89■■□□□ 1.1
CHGA-201ENST00000216492 ARHGEF25Q86VW2 580 aa21.89■■□□□ 1.09
CHGA-201ENST00000216492 LTV1Q96GA3 475 aaPredicted RBP21.89■■□□□ 1.09
CHGA-201ENST00000216492 RTL1A6NKG5 1358 aa21.88■■□□□ 1.09
CHGA-201ENST00000216492 MYH16Q9H6N6 1097 aa21.87■■□□□ 1.09
CHGA-201ENST00000216492 C20orf194Q5TEA3 1177 aa21.87■■□□□ 1.09
CHGA-201ENST00000216492 ARHGEF10O15013 1369 aa21.87■■□□□ 1.09
CHGA-201ENST00000216492 NFAT5O94916 1531 aa21.86■■□□□ 1.09
CHGA-201ENST00000216492 TRPM3Q9HCF6 1732 aaPredicted RBP21.86■■□□□ 1.09
CHGA-201ENST00000216492 SPATA31A3Q5VYP0 1347 aa21.86■■□□□ 1.09
CHGA-201ENST00000216492 IGSF1Q8N6C5 1336 aa21.86■■□□□ 1.09
CHGA-201ENST00000216492 PDE4AP27815 886 aa21.85■■□□□ 1.09
CHGA-201ENST00000216492 IL16Q14005 1332 aa21.84■■□□□ 1.09
CHGA-201ENST00000216492 CENPQQ7L2Z9 268 aaPredicted RBP21.84■■□□□ 1.09
CHGA-201ENST00000216492 SLIT3O75094 1523 aa21.83■■□□□ 1.09
CHGA-201ENST00000216492 ZC3H6P61129 1189 aaKnown RBP21.83■■□□□ 1.09
CHGA-201ENST00000216492 LMOD3Q0VAK6 560 aa21.83■■□□□ 1.08
CHGA-201ENST00000216492 BACH2Q9BYV9 841 aa21.83■■□□□ 1.08
CHGA-201ENST00000216492 ZBTB47Q9UFB7 747 aaPredicted RBP21.83■■□□□ 1.08
CHGA-201ENST00000216492 PXDNQ92626 1479 aa21.82■■□□□ 1.08
CHGA-201ENST00000216492 KDRP35968 1356 aa21.82■■□□□ 1.08
CHGA-201ENST00000216492 TNS3Q68CZ2 1445 aa21.82■■□□□ 1.08
CHGA-201ENST00000216492 SOS2Q07890 1332 aaPredicted RBP21.82■■□□□ 1.08
CHGA-201ENST00000216492 CABLES1Q8TDN4 633 aa21.81■■□□□ 1.08
CHGA-201ENST00000216492 KDM2BQ8NHM5 1336 aa21.81■■□□□ 1.08
CHGA-201ENST00000216492 CALD1Q05682 793 aaKnown RBP21.8■■□□□ 1.08
CHGA-201ENST00000216492 TSR2Q969E8 191 aaKnown RBP21.79■■□□□ 1.08
CHGA-201ENST00000216492 RGPD1P0DJD0 1748 aa21.79■■□□□ 1.08
CHGA-201ENST00000216492 THUMPD2Q9BTF0 503 aaKnown RBP21.79■■□□□ 1.08
CHGA-201ENST00000216492 AXIN2Q9Y2T1 843 aa21.79■■□□□ 1.08
CHGA-201ENST00000216492 ALS2Q96Q42 1657 aa21.79■■□□□ 1.08
CHGA-201ENST00000216492 NBPF6Q5VWK0 638 aa21.78■■□□□ 1.08
CHGA-201ENST00000216492 NBPF4Q96M43 638 aa21.78■■□□□ 1.08
CHGA-201ENST00000216492 FAM83GA6ND36 823 aa21.78■■□□□ 1.08
CHGA-201ENST00000216492 MTHFSDQ2M296 383 aaKnown RBP21.77■■□□□ 1.08
CHGA-201ENST00000216492 LAS1LQ9Y4W2 734 aaKnown RBP21.77■■□□□ 1.08
CHGA-201ENST00000216492 USHBP1Q8N6Y0 703 aa21.76■■□□□ 1.07
CHGA-201ENST00000216492 MED1Q15648 1581 aaPredicted RBP21.76■■□□□ 1.07
CHGA-201ENST00000216492 BCAR3O75815 825 aa21.76■■□□□ 1.07
CHGA-201ENST00000216492 DCTN1Q14203 1278 aa21.76■■□□□ 1.07
CHGA-201ENST00000216492 ANKRD24Q8TF21 1146 aa21.76■■□□□ 1.07
CHGA-201ENST00000216492 LTN1O94822 1766 aa21.76■■□□□ 1.07
CHGA-201ENST00000216492 GAS2L2Q8NHY3 880 aa21.75■■□□□ 1.07
CHGA-201ENST00000216492 LRRC59Q96AG4 307 aaKnown RBP21.75■■□□□ 1.07
CHGA-201ENST00000216492 EXOSC9Q06265 439 aaKnown RBP21.74■■□□□ 1.07
CHGA-201ENST00000216492 GNAI1P63096 354 aa21.73■■□□□ 1.07
CHGA-201ENST00000216492 NPM2Q86SE8 214 aaKnown RBP21.73■■□□□ 1.07
CHGA-201ENST00000216492 IFT57Q9NWB7 429 aa21.73■■□□□ 1.07
CHGA-201ENST00000216492 RARSP54136 660 aaKnown RBP21.73■■□□□ 1.07
CHGA-201ENST00000216492 CT47B1P0C2W7 299 aaPredicted RBP21.72■■□□□ 1.07
CHGA-201ENST00000216492 PHRF1Q9P1Y6 1649 aaKnown RBP21.72■■□□□ 1.07
CHGA-201ENST00000216492 MCM10Q7L590 875 aa21.71■■□□□ 1.07
CHGA-201ENST00000216492 RTF1Q92541 710 aaKnown RBP21.71■■□□□ 1.07
CHGA-201ENST00000216492 CFAP44Q96MT7 982 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms