RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 LRGUKQ96M69 825 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 YME1L1Q96TA2 773 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 MOCS1Q9NZB8 636 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 PAIP2BQ9ULR5 123 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 TBC1D30Q9Y2I9 924 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 HS3ST4Q9Y661 456 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 ZNF638Q14966 1978 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 A8MX80 341 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 FAM155AB1AL88 458 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 E9PAM4 449 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 AIM2O14862 343 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 C1QAP02745 245 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 CHRNGP07510 517 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 BPGMP07738 259 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 RALBP11234 206 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 SLC5A2P31639 672 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 NAGLUP54802 743 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 TBX4P57082 545 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 SLC18A2Q05940 514 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 C16orf72Q14CZ0 275 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 DCLRE1AQ6PJP8 1040 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 PHF21BQ96EK2 531 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 CRISPLD1Q9H336 500 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 PFDN4Q9NQP4 134 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 ANKRD12Q6UB98 2062 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 TRMUO75648 421 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 CRTAMO95727 393 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 AP2A1O95782 977 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 HLA-DQB2P05538 268 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 CPA3P15088 417 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 CD1EP15812 388 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 TCN1P20061 433 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 GP5P40197 560 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 SLC12A2P55011 1212 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 SFSWAPQ12872 951 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 BTG3Q14201 252 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 GRM2Q14416 872 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 AAGABQ6PD74 315 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 TRIML2Q8N7C3 387 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 TMIGD2Q96BF3 282 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 RTP4Q96DX8 246 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 VPS39Q96JC1 886 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 TEKT5Q96M29 485 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 PPCSQ9HAB8 311 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 NDUFA13Q9P0J0 144 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 CDY1Q9Y6F8 540 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 TET1Q8NFU7 2136 aa14.6□□□□□ -0.07
SHROOM1-208ENST00000617339 HACD1B0YJ81 288 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 DCXO43602 365 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 SERPINA6P08185 405 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 CD300LGQ6UXG3 332 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 SLC24A5Q71RS6 500 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 LRRC8DQ7L1W4 858 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 WDR75Q8IWA0 830 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 HMCESQ96FZ2 354 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 DCUN1D5Q9BTE7 237 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 ABCC13Q9NSE7 274 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 SPRP35270 261 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 SERPINB5P36952 375 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 ACVRL1P37023 503 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 GLUD2P49448 558 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 CSHL1Q14406 222 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 ZNF789Q5FWF6 425 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 ITPRIPL1Q6GPH6 555 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 RSPO2Q6UXX9 243 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 NT5C3BQ969T7 300 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 ZNF180Q9UJW8 692 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 GMEB1Q9Y692 573 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 IRAK2O43187 625 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 DNAJA2O60884 412 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 OR1E1P30953 314 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 GALNT3Q14435 633 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 PAFAH1B3Q15102 231 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 KYAT3Q6YP21 454 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 ATG14Q6ZNE5 492 aa14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 USP13Q92995 863 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-208ENST00000617339 ADAM12O43184 909 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 HNRNPLP14866 589 aaKnown RBP eCLIP14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 OR1D2P34982 312 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 PKNOX1P55347 436 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 SEMG2Q02383 582 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 TLE2Q04725 743 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 NRF1Q16656 503 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 FRMD7Q6ZUT3 714 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 SH2D5Q6ZV89 423 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 BHLHA9Q7RTU4 235 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 PHTF2Q8N3S3 785 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 MYEOVQ96EZ4 313 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 ZDHHC7Q9NXF8 308 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 MARCH2Q9P0N8 246 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 SH3GLB1Q9Y371 365 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 PRSS56P0CW18 603 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 EPHA3P29320 983 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 MYBPC1Q00872 1141 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 CDH17Q12864 832 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 ZNF781Q8N8C0 355 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 RIN3Q8TB24 985 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 LRRC39Q96DD0 335 aa14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 CCDC97Q96F63 343 aaPredicted RBP14.58□□□□□ -0.08
SHROOM1-208ENST00000617339 TMEM106CQ9BVX2 250 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms