RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 TMEM25Q86YD3 366 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 ANKLE1Q8NAG6 615 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 OR4K2Q8NGD2 314 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 TTC8Q8TAM2 541 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 CCT6BQ92526 530 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 MTBPQ96DY7 904 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 ZSWIM3Q96MP5 696 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 TMEM237Q96Q45 408 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 RAD9AQ99638 391 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 LBHD1Q9BQE6 289 aaPredicted RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 FEM1AQ9BSK4 669 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 MAGEH1Q9H213 219 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 ABCG8Q9H221 673 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 TLE6Q9H808 572 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 CYP4F12Q9HCS2 524 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 MAN1C1Q9NR34 630 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 ASAH2Q9NR71 780 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.46□□□□□ -1.85
LIG4-205ENST00000614526 ARMCX1Q9P291 453 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 EVLQ9UI08 416 aaPredicted RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 TLK1Q9UKI8 766 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 FBXO5Q9UKT4 447 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 PCDHB9Q9Y5E1 797 aa3.46□□□□□ -1.85
LIG4-205ENST00000614526 SPTBN5Q9NRC6 3674 aaKnown RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 NYNRINQ9P2P1 1898 aaKnown RBP3.46□□□□□ -1.85
LIG4-205ENST00000614526 FAM95CA0A1B0GW59 222 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 NEDD8-MDP1E9PL57 170 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 RFXAPO00287 272 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 LEFTY2O00292 366 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PSMD3O43242 534 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 KDELR3O43731 214 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PLIN3O60664 434 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PIGNO95427 931 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 CBX6O95503 412 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 BPGMP07738 259 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 ATXN1LP0C7T5 689 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 MYL2P10916 166 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TARSP26639 723 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 CD70P32970 193 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 HTR7P34969 479 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 CRHR1P34998 444 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 BMPR1AP36894 532 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PBX2P40425 430 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 SCTRP47872 440 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 ARCN1P48444 511 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 ERFP50548 548 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 SLC12A2P55011 1212 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 STX3Q13277 289 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PPIGQ13427 754 aaKnown RBP eCLIP3.46□□□□□ -1.86
LIG4-205ENST00000614526 CSHL1Q14406 222 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PABPC1LQ4VXU2 614 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 TSTD2Q5T7W7 516 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 VWA5B1Q5TIE3 1220 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PDPK2PQ6A1A2 396 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 EP400NLQ6ZTU2 488 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TTC7BQ86TV6 843 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 ALYREFQ86V81 257 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 LRRC49Q8IUZ0 686 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 ELMOD1Q8N336 334 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 BBS5Q8N3I7 341 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 ZNF366Q8N895 744 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 MRPL43Q8N983 215 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 OR13J1Q8NGT2 312 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 SPPL3Q8TCT6 385 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 SORCS1Q8WY21 1168 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PLD4Q96BZ4 506 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 NXNL1Q96CM4 212 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 RILPQ96NA2 401 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 CDK5RAP1Q96SZ6 601 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 MYLK2Q9H1R3 596 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 MTG2Q9H4K7 406 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 IGFLR1Q9H665 355 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 ZDHHC4Q9NPG8 344 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PNPOQ9NVS9 261 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 HAUS2Q9NVX0 235 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 DONSONQ9NYP3 566 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 HEY2Q9UBP5 337 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 SEPT3Q9UH03 358 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 VPS51Q9UID3 782 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 STK38LQ9Y2H1 464 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 RAI2Q9Y5P3 530 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 HEATR9A2RTY3 570 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TYW5A2RUC4 315 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 CCDC162PA2VCL2 907 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 LINC01553A4QN01 128 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 LDB2O43679 373 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 EFCAB14O75071 495 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 BAIAP3O94812 1187 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 CD160O95971 181 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 GOT2P00505 430 aaKnown RBP3.46□□□□□ -1.86
LIG4-205ENST00000614526 DHRS4L1P0CG22 281 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TROVE2P10155 538 aaKnown RBP eCLIP3.46□□□□□ -1.86
LIG4-205ENST00000614526 ALADP13716 330 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 CPA3P15088 417 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PAMP19021 973 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 TSPAN8P19075 237 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 SERPINB3P29508 390 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 PMLP29590 882 aa3.46□□□□□ -1.86
LIG4-205ENST00000614526 ARRB2P32121 409 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms