RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 MUSKO15146 869 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 SPINT1O43278 529 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 CER1O95813 267 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 CR2P20023 1033 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 MX2P20592 715 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 CSRP1P21291 193 aaKnown RBP16.35■□□□□ 0.21
LSM4-206ENST00000600289 CCNCP24863 283 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 CD38P28907 300 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 ABL2P42684 1182 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 CTSKP43235 329 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 RPS21P63220 83 aaKnown RBP16.35■□□□□ 0.21
LSM4-206ENST00000600289 OVGP1Q12889 678 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 HNRNPDQ14103 355 aaKnown RBP16.35■□□□□ 0.21
LSM4-206ENST00000600289 ZNF235Q14590 738 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 IFI16Q16666 785 aaKnown RBP16.35■□□□□ 0.21
LSM4-206ENST00000600289 COL28A1Q2UY09 1125 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 ZNF284Q2VY69 593 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 ZFYVE27Q5T4F4 411 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 BRAT1Q6PJG6 821 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 BBS5Q8N3I7 341 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 PLD5Q8N7P1 536 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 SPC24Q8NBT2 197 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 TPCN2Q8NHX9 752 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 NSMCE1Q8WV22 266 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 ASB12Q8WXK4 309 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 MAML1Q92585 1016 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 SKA1Q96BD8 255 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 HDAC11Q96DB2 347 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 ECHDC3Q96DC8 303 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 SERAC1Q96JX3 654 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 GTPBP2Q9BX10 602 aaKnown RBP16.35■□□□□ 0.21
LSM4-206ENST00000600289 SUV39H2Q9H5I1 410 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 AMACRQ9UHK6 382 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 ZFR2Q9UPR6 939 aaKnown RBP16.35■□□□□ 0.21
LSM4-206ENST00000600289 ANKRD6Q9Y2G4 727 aa16.35■□□□□ 0.21
LSM4-206ENST00000600289 COL5A1P20908 1838 aaPredicted RBP16.34■□□□□ 0.21
LSM4-206ENST00000600289 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.34■□□□□ 0.21
LSM4-206ENST00000600289 A0A1B0GVT2 93 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 OPHN1O60890 802 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 KRT1P04264 644 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 ZFXP17010 805 aaPredicted RBP16.34■□□□□ 0.21
LSM4-206ENST00000600289 SERPINA4P29622 427 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 CSNK1EP49674 416 aaKnown RBP16.34■□□□□ 0.21
LSM4-206ENST00000600289 ZNF423Q2M1K9 1284 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 SLC45A4Q5BKX6 768 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 MARC1Q5VT66 337 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 ALG1LQ6GMV1 187 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 KATNAL2Q8IYT4 538 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 MFSD2AQ8NA29 543 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 TMEM145Q8NBT3 493 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 ACRBPQ8NEB7 543 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 FAM174AQ8TBP5 190 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 FEM1CQ96JP0 617 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 NUDCD1Q96RS6 583 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 LACRTQ9GZZ8 138 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 DTLQ9NZJ0 730 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 PCDHGB2Q9Y5G2 931 aa16.34■□□□□ 0.21
LSM4-206ENST00000600289 PLXNB3Q9ULL4 1909 aa16.33■□□□□ 0.21
LSM4-206ENST00000600289 A0A1W2PQ67 120 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 TRAFD1O14545 582 aaPredicted RBP16.33■□□□□ 0.2
LSM4-206ENST00000600289 MATN3O15232 486 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 DFNA5O60443 496 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 SOCS5O75159 536 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 PCDH8O95206 1070 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 PIGNO95427 931 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 WNT1P04628 370 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 TIMP2P16035 220 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 HNRNPA2B1P22626 353 aaKnown RBP16.33■□□□□ 0.2
LSM4-206ENST00000600289 MAT2AP31153 395 aaKnown RBP16.33■□□□□ 0.2
LSM4-206ENST00000600289 MMP13P45452 471 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 GBE1Q04446 702 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 ELP6Q0PNE2 266 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 KIF19Q2TAC6 998 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 HLA-BQ31612 363 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 ADAT2Q7Z6V5 191 aaKnown RBP16.33■□□□□ 0.2
LSM4-206ENST00000600289 PIP4P1Q86T03 277 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 PGBD5Q8N414 524 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 ZNF830Q96NB3 372 aaPredicted RBP16.33■□□□□ 0.2
LSM4-206ENST00000600289 OLFM3Q96PB7 478 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 LENG8Q96PV6 779 aaPredicted RBP16.33■□□□□ 0.2
LSM4-206ENST00000600289 AASDHPPTQ9NRN7 309 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.33■□□□□ 0.2
LSM4-206ENST00000600289 HYOU1Q9Y4L1 999 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 SNX11Q9Y5W9 270 aa16.33■□□□□ 0.2
LSM4-206ENST00000600289 APOL1O14791 398 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 WNT9AO14904 365 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 MAGEC1O60732 1142 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 CTNNA1P35221 906 aaKnown RBP16.32■□□□□ 0.2
LSM4-206ENST00000600289 CDKN2BP42772 138 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 C21orf59P57076 290 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 BCL2L1Q07817 233 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 PPIDQ08752 370 aaKnown RBP16.32■□□□□ 0.2
LSM4-206ENST00000600289 SLC10A2Q12908 348 aaPredicted RBP16.32■□□□□ 0.2
LSM4-206ENST00000600289 UGP2Q16851 508 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 TMEM52BQ4KMG9 183 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 ODF2Q5BJF6 829 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 SEL1L3Q68CR1 1132 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 MFSD7Q6UXD7 560 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 DAAM2Q86T65 1068 aa16.32■□□□□ 0.2
LSM4-206ENST00000600289 TTC7BQ86TV6 843 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms