RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 PCID2Q5JVF3 399 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 RALGPS2Q86X27 583 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 CAMK1DQ8IU85 385 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 PALM2Q8IXS6 379 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 CHST14Q8NCH0 376 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 OR6K2Q8NGY2 324 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 MAFAQ8NHW3 353 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 PTCD2Q8WV60 388 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 SPOCK2Q92563 424 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 EZH1Q92800 747 aaPredicted RBP14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 PTPRN2Q92932 1015 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 TRIM56Q9BRZ2 755 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 TMEM109Q9BVC6 243 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 TMEM245Q9H330 911 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 ATP13A3Q9H7F0 1226 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 PRDM6Q9NQX0 595 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 SLC2A4RGQ9NR83 387 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 PRKAG3Q9UGI9 489 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 RPL26L1Q9UNX3 145 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 PLA2G4CQ9UP65 541 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 TCAF1Q9Y4C2 921 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 MAD1L1Q9Y6D9 718 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 WASF2Q9Y6W5 498 aa14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 SPTBN5Q9NRC6 3674 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 ZNF106Q9H2Y7 1883 aaKnown RBP14.86□□□□□ -0.03
SHKBP1-211ENST00000595945 A0A087WUV0 522 aaPredicted RBP14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 AGPSO00116 658 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 TCEA3O75764 348 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 ALDH1A2O94788 518 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 PIGNO95427 931 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 GLULP15104 373 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 ADRA1DP25100 572 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 GKP32189 559 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 EIF3BP55884 814 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 GALNT3Q14435 633 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 GRM3Q14832 879 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 QPCTQ16769 361 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 HNRNPA1L2Q32P51 320 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 PKN3Q6P5Z2 889 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 CYS1Q717R9 158 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 TMEM135Q86UB9 458 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 OR2W6PQ8NHA6 318 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 UHMK1Q8TAS1 419 aaKnown RBP14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 PIH1D2Q8WWB5 315 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 ECHDC3Q96DC8 303 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 CFAP36Q96G28 342 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 HEPHQ9BQS7 1158 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 MTG2Q9H4K7 406 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 VPS37BQ9H9H4 285 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 SLC8A2Q9UPR5 921 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 PRUNE2Q8WUY3 3088 aa14.85□□□□□ -0.03
SHKBP1-211ENST00000595945 NCOR1O75376 2440 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 LRRK1Q38SD2 2015 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 EDDM13A0A1B0GTR0 161 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 ZCWPW2A0A1B0GU75 182 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 ANTXRLA6NF34 631 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 SHISA7A6NL88 538 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 K7EQS6 105 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 NARSO43776 548 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 USP1O94782 785 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 PRKCHP24723 683 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 SERPINA4P29622 427 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 KIR2DL1P43626 348 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 RECQLP46063 649 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 PFKPQ01813 784 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 RAD51Q06609 339 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 ZNF844Q08AG5 666 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 TDGQ13569 410 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 CRYMQ14894 314 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 ANKRD20A4Q4UJ75 823 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 FNDC3BQ53EP0 1204 aaKnown RBP14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 SPANXN3Q5MJ09 141 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 IER5LQ5T953 404 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 ARMC12Q5T9G4 340 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 EGFLAMQ63HQ2 1017 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 CASC4Q6P4E1 433 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 C3orf62Q6ZUJ4 267 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 NUDT18Q6ZVK8 323 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 ZSWIM9Q86XI8 627 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 RYBPQ8N488 228 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 LPCAT1Q8NF37 534 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 GSDMBQ8TAX9 411 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 MSANTD3Q96H12 275 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 ZNF641Q96N77 438 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 FCRL3Q96P31 734 aaPredicted RBP14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 ADGRE3Q9BY15 652 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 SUV39H2Q9H5I1 410 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 ACSS3Q9H6R3 686 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 HEBP1Q9NRV9 189 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 MOCS1Q9NZB8 636 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 SAMD15Q9P1V8 674 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 RABGEF1Q9UJ41 708 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 PPIL1Q9Y3C6 166 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 PIAS3Q9Y6X2 628 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 FAM169AQ9Y6X4 670 aa14.84□□□□□ -0.03
SHKBP1-211ENST00000595945 TCRBV9S1A1TA0A576 114 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 TSPAN11A1L157 253 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 HEATR9A2RTY3 570 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 MROH6A6NGR9 719 aa14.83□□□□□ -0.04
SHKBP1-211ENST00000595945 ANKRD66B4E2M5 251 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms