RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 MARC1Q5VT66 337 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 GLRX5Q86SX6 157 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 METTL3Q86U44 580 aaKnown RBP21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 SLC13A5Q86YT5 568 aaPredicted RBP21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 AADATQ8N5Z0 425 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 PIP4K2CQ8TBX8 421 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 MDM1Q8TC05 714 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 HNRNPLLQ8WVV9 542 aaKnown RBP21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 PSKH2Q96QS6 385 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 HEPHQ9BQS7 1158 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 FBRSQ9HAH7 460 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 NT5MQ9NPB1 228 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 SEPT10Q9P0V9 454 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 SEPT3Q9UH03 358 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 IL36AQ9UHA7 158 aa21.73■■□□□ 1.07
R3HDM4-206ENST00000590454 KRIT1O00522 736 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 PPP1R12AO14974 1030 aaPredicted RBP21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 ALOX15BO15296 676 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 CEP104O60308 925 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 JCHAINP01591 159 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 CCNB1P14635 433 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 SLC8A1P32418 973 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 TPMTP51580 245 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 ZNF235Q14590 738 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 TIGD7Q6NT04 549 aaPredicted RBP21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 PLPP6Q8IY26 295 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 TFB1MQ8WVM0 346 aaKnown RBP21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 FATE1Q969F0 183 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 ARRDC3Q96B67 414 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 CCDC114Q96M63 670 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 GDAP1L1Q96MZ0 367 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 QKIQ96PU8 341 aaKnown RBP eCLIP21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 PABPC3Q9H361 631 aaKnown RBP21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 ITM2CQ9NQX7 267 aa21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 RBM22Q9NW64 420 aaKnown RBP eCLIP21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 USP36Q9P275 1121 aaKnown RBP21.72■■□□□ 1.07
R3HDM4-206ENST00000590454 EIF4E1BA6NMX2 242 aaKnown RBP21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 RNASEH1O60930 286 aaKnown RBP21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 IGSF6O95976 241 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 HLA-DQB2P05538 268 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 EIF3EP60228 445 aaKnown RBP21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 GRIK2Q13002 908 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 IHHQ14623 411 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 SIX1Q15475 284 aaPredicted RBP21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 SRLQ86TD4 932 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 SLCO6A1Q86UG4 719 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 FAM124AQ86V42 546 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 CNTD1Q8N815 330 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 COG1Q8WTW3 980 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 NSMCE1Q8WV22 266 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 ATG4AQ8WYN0 398 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 MS4A14Q96JA4 679 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 MGME1Q9BQP7 344 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 SCUBE2Q9NQ36 999 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 SMARCAL1Q9NZC9 954 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 RAXQ9Y2V3 346 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 FARP1Q9Y4F1 1045 aaPredicted RBP21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 NUMA1Q14980 2115 aa21.71■■□□□ 1.07
R3HDM4-206ENST00000590454 A0A1W2PP55 124 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 H7C0C1 242 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 CBFA2T3O75081 653 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 PIGNO95427 931 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 POP4O95707 220 aaKnown RBP21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 DNTTP04053 509 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 CR2P20023 1033 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 MAOBP27338 520 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 DRD3P35462 400 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 ATP5OP48047 213 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 SCNN1BP51168 640 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 IFI35P80217 286 aaPredicted RBP21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 WASHC5Q12768 1159 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 HS1BP3Q53T59 392 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 BZW1Q7L1Q6 419 aaKnown RBP21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 TMIEQ8NEW7 156 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 OSBPL9Q96SU4 736 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 IL12RB2Q99665 862 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 BRD8Q9H0E9 1235 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 PCOLCE2Q9UKZ9 415 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 ZKSCAN5Q9Y2L8 839 aa21.7■■□□□ 1.06
R3HDM4-206ENST00000590454 CEP192Q8TEP8 1941 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 A0A1B0GTW7 788 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 KPNA3O00505 521 aaPredicted RBP21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 ZNF185O15231 689 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 FGGP02679 453 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 UGT2B4P06133 528 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 ACADMP11310 421 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 PTPN3P26045 913 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 RBL1P28749 1068 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 RENBPP51606 427 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 NSUN2Q08J23 767 aaKnown RBP eCLIP21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 XRCC4Q13426 336 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 SLC45A4Q5BKX6 768 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 DSG4Q86SJ6 1040 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 SETD7Q8WTS6 366 aaKnown RBP21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 C1orf54Q8WWF1 131 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 LRIG1Q96JA1 1093 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 NEUROG2Q9H2A3 272 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 NOD2Q9HC29 1040 aa21.69■■□□□ 1.06
R3HDM4-206ENST00000590454 FBXL12Q9NXK8 326 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms