RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 MRRFQ96E11 262 aaKnown RBP26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 MYO19Q96H55 970 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 PSMC3IPQ9P2W1 217 aaPredicted RBP26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 TBK1Q9UHD2 729 aa26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 EVLQ9UI08 416 aaPredicted RBP26.25■■□□□ 1.79
SCAMP4-210ENST00000588555 PRUNE2Q8WUY3 3088 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 ARNTLO00327 626 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 MAPK8P45983 427 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 VASPP50552 380 aaPredicted RBP26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 DLG2Q15700 870 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 ZNF449Q6P9G9 518 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 MTSS1LQ765P7 747 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 LRRC6Q86X45 466 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 PHTF2Q8N3S3 785 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 PCDH20Q8N6Y1 951 aaKnown RBP26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 OR6K2Q8NGY2 324 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 SORCS1Q8WY21 1168 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 CHFRQ96EP1 664 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 CERS2Q96G23 380 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 DEC1Q9P2X7 70 aa26.24■■□□□ 1.79
SCAMP4-210ENST00000588555 HEATR9A2RTY3 570 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 GRXCR2A6NFK2 248 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 GSRP00390 522 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 ALADP13716 330 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 GDI1P31150 447 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 NR1H3Q13133 447 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 HTR4Q13639 388 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 CYB5D2Q8WUJ1 264 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 TREX1Q9NSU2 369 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 IL1RAPL1Q9NZN1 696 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 NUMBLQ9Y6R0 609 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 ANHXE9PGG2 379 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 GJA4P35212 333 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 OPRD1P41143 372 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 MSH2P43246 934 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 SNRPD1P62314 119 aaKnown RBP26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 PTPRNQ16849 979 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 GRAMD4Q6IC98 578 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 PPM1NQ8N819 430 aa26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 TRMT61BQ9BVS5 477 aaKnown RBP26.23■■□□□ 1.79
SCAMP4-210ENST00000588555 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 CCDC78A2IDD5 438 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 MROH6A6NGR9 719 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 PRRT4C9JH25 899 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 TRAFD1O14545 582 aaPredicted RBP26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 ASLP04424 464 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 DLDP09622 509 aaKnown RBP26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 GKP32189 559 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 MAGOHP61326 146 aaKnown RBP26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 MGAT5Q09328 741 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 SEPT6Q14141 434 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 SKIDA1Q1XH10 827 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 NAIF1Q69YI7 327 aaPredicted RBP26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 CAMK1DQ8IU85 385 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 CTAGE3PQ8IX95 158 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 TTC8Q8TAM2 541 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 FRS2Q8WU20 508 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 NXPE3Q969Y0 559 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 CIPCQ9C0C6 399 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 STMN4Q9H169 189 aaPredicted RBP26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 SLC2A6Q9UGQ3 507 aa26.22■■□□□ 1.79
SCAMP4-210ENST00000588555 HTRA2O43464 458 aaPredicted RBP26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 LDB2O43679 373 aa26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 PRKCGP05129 697 aa26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 ERVK-10P10266 1014 aa26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 CA4P22748 312 aa26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 SP100P23497 879 aaPredicted RBP26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 TMED2Q15363 201 aa26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 ESRP1Q6NXG1 681 aaKnown RBP26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 MARK2Q7KZI7 788 aaKnown RBP26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 SLC26A11Q86WA9 606 aa26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 LPCAT1Q8NF37 534 aa26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 ADGRE3Q9BY15 652 aa26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 ELOVL2Q9NXB9 296 aa26.21■■□□□ 1.79
SCAMP4-210ENST00000588555 POLR3GO15318 223 aaPredicted RBP26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 UGT1A9O60656 530 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 ATP5BP06576 529 aaKnown RBP26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 SRPRAP08240 638 aaKnown RBP26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 MYLK3Q32MK0 819 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 ACCSLQ4AC99 568 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 CARD16Q5EG05 197 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 Q6ZVU0 165 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 PLPP6Q8IY26 295 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 RMDN1Q96DB5 314 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 UGT1A7Q9HAW7 530 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 UGT1A10Q9HAW8 530 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 UGT1A8Q9HAW9 530 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 PPANQ9NQ55 473 aaKnown RBP26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 SLC17A6Q9P2U8 582 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 HECAQ9UBI9 543 aaPredicted RBP26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 ZNF180Q9UJW8 692 aa26.2■■□□□ 1.79
SCAMP4-210ENST00000588555 MUC22E2RYF6 1773 aaPredicted RBP26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 FOXO6A8MYZ6 492 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 ANKRD66B4E2M5 251 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 SOCS5O75159 536 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 PGLSO95336 258 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 PAPSS2O95340 614 aaPredicted RBP26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 PIGNO95427 931 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 PIRTP0C851 137 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 ARNTP27540 789 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms