RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 C5orf22Q49AR2 442 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 ZNF569Q5MCW4 686 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 FAM171A1Q5VUB5 890 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 IZUMO3Q5VZ72 239 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 MEX3BQ6ZN04 569 aaKnown RBP3.04□□□□□ -1.92
VAPA-208ENST00000584796 CEP76Q8TAP6 659 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 IPO4Q8TEX9 1081 aaKnown RBP3.04□□□□□ -1.92
VAPA-208ENST00000584796 C18orf8Q96DM3 657 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 FRG2BQ96QU4 278 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 NODALQ96S42 347 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 STK33Q9BYT3 514 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 TMEM248Q9NWD8 314 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 OCIAD1Q9NX40 245 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 IGSF9Q9P2J2 1179 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 AGO1Q9UL18 857 aaKnown RBP3.04□□□□□ -1.92
VAPA-208ENST00000584796 LZTS1Q9Y250 596 aa3.04□□□□□ -1.92
VAPA-208ENST00000584796 SRPRBQ9Y5M8 271 aaKnown RBP3.04□□□□□ -1.92
VAPA-208ENST00000584796 WDR81Q562E7 1941 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 TAF1P21675 1872 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 FAM90A18PA6NE21 464 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 FAM90A16PA6NEW6 464 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 FAM90A9PA6NNJ1 464 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 FAM90A5PA8MXJ8 464 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 BMPR1BO00238 502 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 APAF1O14727 1248 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 PIP5K1BO14986 540 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 HLA-DQA2P01906 255 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 FAM90A15PP0C7V4 464 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 FAM90A14PP0C7W9 464 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 PRPH2P23942 346 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 PRKCHP24723 683 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 AKT1P31749 480 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 CDH12P55289 794 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 KRTAP10-12P60413 245 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 SLC39A14Q15043 492 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 ZDHHC23Q8IYP9 409 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 OR2C3Q8N628 320 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 LILRB1Q8NHL6 650 aaPredicted RBP3.03□□□□□ -1.92
VAPA-208ENST00000584796 HDAC7Q8WUI4 952 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 RSC1A1Q92681 617 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 RIPOR3Q96MK2 946 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 SLC25A33Q9BSK2 321 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 TCF7L2Q9NQB0 619 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 SLC22A11Q9NSA0 550 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 SRP68Q9UHB9 627 aaKnown RBP3.03□□□□□ -1.92
VAPA-208ENST00000584796 CNTN6Q9UQ52 1028 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 CEP83Q9Y592 693 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 SCN7AQ01118 1682 aa3.03□□□□□ -1.92
VAPA-208ENST00000584796 SPTBN5Q9NRC6 3674 aaKnown RBP3.03□□□□□ -1.93
VAPA-208ENST00000584796 EYSQ5T1H1 3165 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 KTN1Q86UP2 1357 aaKnown RBP3.02□□□□□ -1.93
VAPA-208ENST00000584796 USP47Q96K76 1375 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 LAMA3Q16787 3333 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 PASKQ96RG2 1323 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 C17orf102A2RUQ5 167 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 LINC01553A4QN01 128 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 HSPB6O14558 160 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 DNPH1O43598 174 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 CLDN7O95471 211 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 GYS1P13807 737 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 ENO3P13929 434 aaPredicted RBP3.02□□□□□ -1.93
VAPA-208ENST00000584796 TRIM27P14373 513 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 TYK2P29597 1187 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 RCAN1P53805 252 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 RNASELQ05823 741 aaKnown RBP3.02□□□□□ -1.93
VAPA-208ENST00000584796 RBM39Q14498 530 aaKnown RBP3.02□□□□□ -1.93
VAPA-208ENST00000584796 EFHC1Q5JVL4 640 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 KIAA1324Q6UXG2 1013 aaKnown RBP3.02□□□□□ -1.93
VAPA-208ENST00000584796 ZNF771Q7L3S4 317 aaPredicted RBP3.02□□□□□ -1.93
VAPA-208ENST00000584796 TEX45Q8NA69 505 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 PIGBQ92521 554 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 GFM1Q96RP9 751 aaKnown RBP3.02□□□□□ -1.93
VAPA-208ENST00000584796 PRPF18Q99633 342 aaKnown RBP3.02□□□□□ -1.93
VAPA-208ENST00000584796 HDHD5Q9BXW7 423 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 GAREM1Q9H706 876 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 SDF2L1Q9HCN8 221 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 KLHL42Q9P2K6 505 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 SEL1LQ9UBV2 794 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 SLC39A10Q9ULF5 831 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 OSGIN2Q9Y236 505 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 KIAA0100Q14667 2235 aaKnown RBP3.02□□□□□ -1.93
VAPA-208ENST00000584796 VCANP13611 3396 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 ZSWIM8A7E2V4 1837 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 RBBP6Q7Z6E9 1792 aaKnown RBP3.02□□□□□ -1.93
VAPA-208ENST00000584796 UBR2Q8IWV8 1755 aa3.02□□□□□ -1.93
VAPA-208ENST00000584796 MAP3K19Q56UN5 1328 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 CENPJQ9HC77 1338 aaPredicted RBP3.01□□□□□ -1.93
VAPA-208ENST00000584796 TMEM247A6NEH6 219 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 PRR23AA6NEV1 266 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 AGAP5A6NIR3 686 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 RNMTO43148 476 aaKnown RBP3.01□□□□□ -1.93
VAPA-208ENST00000584796 SERPINI2O75830 405 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 C21orf33P30042 268 aaPredicted RBP3.01□□□□□ -1.93
VAPA-208ENST00000584796 CTCFP49711 727 aaPredicted RBP3.01□□□□□ -1.93
VAPA-208ENST00000584796 CDK7P50613 346 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 CLCNKBP51801 687 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 BTBD16Q32M84 506 aa3.01□□□□□ -1.93
VAPA-208ENST00000584796 ZACNQ401N2 412 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms